RNA–Protein interactions for RNA: ENST00000506496.1

FBXO4-205, Transcript of F-box protein 4, humanhuman

TSL 3

Gene FBXO4, Length 637 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO4-205ENST00000506496 NBPF15Q8N660 670 aa22.3■■□□□ 1.16
FBXO4-205ENST00000506496 RRAGCQ9HB90 399 aa22.3■■□□□ 1.16
FBXO4-205ENST00000506496 NIP7Q9Y221 180 aaKnown RBP eCLIP22.3■■□□□ 1.16
FBXO4-205ENST00000506496 DLG5Q8TDM6 1919 aa22.29■■□□□ 1.16
FBXO4-205ENST00000506496 ANKRD31Q8N7Z5 1873 aa22.29■■□□□ 1.16
FBXO4-205ENST00000506496 CNKSR1Q969H4 720 aa22.29■■□□□ 1.16
FBXO4-205ENST00000506496 SBF1O95248 1867 aa22.28■■□□□ 1.16
FBXO4-205ENST00000506496 GTF2E1P29083 439 aaPredicted RBP22.28■■□□□ 1.16
FBXO4-205ENST00000506496 RRP7AQ9Y3A4 280 aaKnown RBP22.28■■□□□ 1.16
FBXO4-205ENST00000506496 TPTE2Q6XPS3 522 aa22.27■■□□□ 1.16
FBXO4-205ENST00000506496 ZC3H4Q9UPT8 1303 aaKnown RBP22.27■■□□□ 1.16
FBXO4-205ENST00000506496 NFKBIEO00221 500 aa22.26■■□□□ 1.15
FBXO4-205ENST00000506496 APLP1P51693 650 aa22.26■■□□□ 1.15
FBXO4-205ENST00000506496 STYK1Q6J9G0 422 aa22.26■■□□□ 1.15
FBXO4-205ENST00000506496 RBM46Q8TBY0 533 aaKnown RBP22.26■■□□□ 1.15
FBXO4-205ENST00000506496 MASTLQ96GX5 879 aa22.26■■□□□ 1.15
FBXO4-205ENST00000506496 MYL6BP14649 208 aa22.25■■□□□ 1.15
FBXO4-205ENST00000506496 RIPK4P57078 832 aa22.25■■□□□ 1.15
FBXO4-205ENST00000506496 EIF4A1P60842 406 aaKnown RBP22.25■■□□□ 1.15
FBXO4-205ENST00000506496 KIF6Q6ZMV9 814 aa22.25■■□□□ 1.15
FBXO4-205ENST00000506496 TSPYL4Q9UJ04 414 aa22.25■■□□□ 1.15
FBXO4-205ENST00000506496 COL11A2P13942 1736 aaPredicted RBP22.25■■□□□ 1.15
FBXO4-205ENST00000506496 SRGNP10124 158 aa22.24■■□□□ 1.15
FBXO4-205ENST00000506496 PRPF40BQ6NWY9 871 aaKnown RBP22.24■■□□□ 1.15
FBXO4-205ENST00000506496 LAMB4A4D0S4 1761 aa22.24■■□□□ 1.15
FBXO4-205ENST00000506496 PRELPP51888 382 aa22.23■■□□□ 1.15
FBXO4-205ENST00000506496 HLFQ16534 295 aa22.23■■□□□ 1.15
FBXO4-205ENST00000506496 SOGA3Q5TF21 947 aa22.23■■□□□ 1.15
FBXO4-205ENST00000506496 DPY19L2Q6NUT2 758 aa22.23■■□□□ 1.15
FBXO4-205ENST00000506496 MYBBP1AQ9BQG0 1328 aaKnown RBP22.23■■□□□ 1.15
FBXO4-205ENST00000506496 KDM3BQ7LBC6 1761 aa22.22■■□□□ 1.15
FBXO4-205ENST00000506496 GLTPD2A6NH11 291 aa22.22■■□□□ 1.15
FBXO4-205ENST00000506496 LMOD3Q0VAK6 560 aa22.22■■□□□ 1.15
FBXO4-205ENST00000506496 ERFEQ4G0M1 354 aa22.22■■□□□ 1.15
FBXO4-205ENST00000506496 TAOK3Q9H2K8 898 aa22.22■■□□□ 1.15
FBXO4-205ENST00000506496 TNRC6CQ9HCJ0 1690 aaKnown RBP22.22■■□□□ 1.15
FBXO4-205ENST00000506496 RGL2O15211 777 aa22.21■■□□□ 1.15
FBXO4-205ENST00000506496 NPR1P16066 1061 aa22.21■■□□□ 1.15
FBXO4-205ENST00000506496 WDR43Q15061 677 aaKnown RBP eCLIP22.21■■□□□ 1.15
FBXO4-205ENST00000506496 NEUROD2Q15784 382 aa22.21■■□□□ 1.15
FBXO4-205ENST00000506496 CACNA1SQ13698 1873 aa22.21■■□□□ 1.15
FBXO4-205ENST00000506496 CCDC88AQ3V6T2 1871 aa22.2■■□□□ 1.14
FBXO4-205ENST00000506496 FSTL1Q12841 308 aa22.2■■□□□ 1.14
FBXO4-205ENST00000506496 ZBTB3Q9H5J0 574 aa22.2■■□□□ 1.14
FBXO4-205ENST00000506496 TIAM2Q8IVF5 1701 aa22.2■■□□□ 1.14
FBXO4-205ENST00000506496 VEGFAP15692 232 aaPredicted RBP22.19■■□□□ 1.14
FBXO4-205ENST00000506496 EIF2S2P20042 333 aaKnown RBP22.19■■□□□ 1.14
FBXO4-205ENST00000506496 CCDC146Q8IYE0 955 aa22.19■■□□□ 1.14
FBXO4-205ENST00000506496 NYXQ9GZU5 481 aa22.19■■□□□ 1.14
FBXO4-205ENST00000506496 MAP3K15Q6ZN16 1313 aa22.19■■□□□ 1.14
FBXO4-205ENST00000506496 ERVV-1B6SEH8 477 aa22.18■■□□□ 1.14
FBXO4-205ENST00000506496 TMPOP42166 694 aaKnown RBP22.18■■□□□ 1.14
FBXO4-205ENST00000506496 TTLL7Q6ZT98 887 aa22.18■■□□□ 1.14
FBXO4-205ENST00000506496 SMC1BQ8NDV3 1235 aa22.18■■□□□ 1.14
FBXO4-205ENST00000506496 SLX4Q8IY92 1834 aa22.17■■□□□ 1.14
FBXO4-205ENST00000506496 GPTP24298 496 aa22.17■■□□□ 1.14
FBXO4-205ENST00000506496 CCDC93Q567U6 631 aa22.17■■□□□ 1.14
FBXO4-205ENST00000506496 LTBP3Q9NS15 1303 aa22.16■■□□□ 1.14
FBXO4-205ENST00000506496 NUTM1Q86Y26 1132 aa22.16■■□□□ 1.14
FBXO4-205ENST00000506496 LAS1LQ9Y4W2 734 aaKnown RBP22.16■■□□□ 1.14
FBXO4-205ENST00000506496 ALDH1B1P30837 517 aa22.15■■□□□ 1.14
FBXO4-205ENST00000506496 FER1L6Q2WGJ9 1857 aa22.15■■□□□ 1.14
FBXO4-205ENST00000506496 ERBB4Q15303 1308 aa22.14■■□□□ 1.14
FBXO4-205ENST00000506496 NECTIN2Q92692 538 aa22.13■■□□□ 1.13
FBXO4-205ENST00000506496 RPGRQ92834 1020 aaKnown RBP22.13■■□□□ 1.13
FBXO4-205ENST00000506496 RUNDC1Q96C34 613 aa22.13■■□□□ 1.13
FBXO4-205ENST00000506496 ARFGEF2Q9Y6D5 1785 aa22.12■■□□□ 1.13
FBXO4-205ENST00000506496 KLRG2A4D1S0 409 aaPredicted RBP22.12■■□□□ 1.13
FBXO4-205ENST00000506496 BABAM1Q9NWV8 329 aa22.12■■□□□ 1.13
FBXO4-205ENST00000506496 NUP98P52948 1817 aa22.11■■□□□ 1.13
FBXO4-205ENST00000506496 HTRA3P83110 453 aa22.11■■□□□ 1.13
FBXO4-205ENST00000506496 RTKN2Q8IZC4 609 aa22.11■■□□□ 1.13
FBXO4-205ENST00000506496 ABCC12Q96J65 1359 aa22.11■■□□□ 1.13
FBXO4-205ENST00000506496 ANXA1P04083 346 aa22.1■■□□□ 1.13
FBXO4-205ENST00000506496 FKBP4Q02790 459 aaKnown RBP eCLIP22.1■■□□□ 1.13
FBXO4-205ENST00000506496 OLFM4Q6UX06 510 aa22.1■■□□□ 1.13
FBXO4-205ENST00000506496 GIGYF2Q6Y7W6 1299 aaKnown RBP22.1■■□□□ 1.13
FBXO4-205ENST00000506496 PPP1R42Q7Z4L9 355 aa22.1■■□□□ 1.13
FBXO4-205ENST00000506496 C7orf43Q8WVR3 580 aa22.1■■□□□ 1.13
FBXO4-205ENST00000506496 ZNF277Q9NRM2 450 aaPredicted RBP22.1■■□□□ 1.13
FBXO4-205ENST00000506496 DICER1Q9UPY3 1922 aaKnown RBP22.1■■□□□ 1.13
FBXO4-205ENST00000506496 WDR90Q96KV7 1748 aa22.09■■□□□ 1.13
FBXO4-205ENST00000506496 DDNO94850 711 aaPredicted RBP22.09■■□□□ 1.13
FBXO4-205ENST00000506496 AIMP1Q12904 312 aaKnown RBP22.09■■□□□ 1.13
FBXO4-205ENST00000506496 SUSD4Q5VX71 490 aa22.09■■□□□ 1.13
FBXO4-205ENST00000506496 UBN2Q6ZU65 1347 aa22.08■■□□□ 1.13
FBXO4-205ENST00000506496 PROSER3Q2NL68 480 aa22.07■■□□□ 1.12
FBXO4-205ENST00000506496 PARP10Q53GL7 1025 aa22.07■■□□□ 1.12
FBXO4-205ENST00000506496 ZNF34Q8IZ26 560 aa22.07■■□□□ 1.12
FBXO4-205ENST00000506496 RBM17Q96I25 401 aaKnown RBP22.07■■□□□ 1.12
FBXO4-205ENST00000506496 ADAMTS8Q9UP79 889 aa22.07■■□□□ 1.12
FBXO4-205ENST00000506496 TCERG1O14776 1098 aaKnown RBP22.06■■□□□ 1.12
FBXO4-205ENST00000506496 PDIA6Q15084 440 aa22.06■■□□□ 1.12
FBXO4-205ENST00000506496 SYNE4Q8N205 404 aa22.06■■□□□ 1.12
FBXO4-205ENST00000506496 DNAJC5GQ8N7S2 189 aa22.06■■□□□ 1.12
FBXO4-205ENST00000506496 IBTKQ9P2D0 1353 aaPredicted RBP22.06■■□□□ 1.12
FBXO4-205ENST00000506496 POTECB2RU33 542 aa22.05■■□□□ 1.12
FBXO4-205ENST00000506496 CRY2Q49AN0 593 aa22.05■■□□□ 1.12
FBXO4-205ENST00000506496 COPS6Q7L5N1 327 aa22.05■■□□□ 1.12
FBXO4-205ENST00000506496 UTP14AQ9BVJ6 771 aaKnown RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms