RNA–Protein interactions for RNA: ENST00000506441.1

RETREG1-203, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 585 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-203ENST00000506441 CCDC9Q9Y3X0 531 aaKnown RBP12.9□□□□□ -0.34
RETREG1-203ENST00000506441 H3BRB1 525 aa12.89□□□□□ -0.35
RETREG1-203ENST00000506441 H7C1W4 665 aa12.89□□□□□ -0.35
RETREG1-203ENST00000506441 EFHC2Q5JST6 749 aa12.89□□□□□ -0.35
RETREG1-203ENST00000506441 CAPN12Q6ZSI9 719 aa12.89□□□□□ -0.35
RETREG1-203ENST00000506441 TUT1Q9H6E5 874 aaKnown RBP12.89□□□□□ -0.35
RETREG1-203ENST00000506441 QTRT2Q9H974 415 aaKnown RBP12.89□□□□□ -0.35
RETREG1-203ENST00000506441 FAM13BQ9NYF5 915 aa12.89□□□□□ -0.35
RETREG1-203ENST00000506441 DNMT3AQ9Y6K1 912 aaPredicted RBP12.89□□□□□ -0.35
RETREG1-203ENST00000506441 AAMPQ13685 434 aa12.88□□□□□ -0.35
RETREG1-203ENST00000506441 LBRQ14739 615 aaKnown RBP12.88□□□□□ -0.35
RETREG1-203ENST00000506441 GMPR2Q9P2T1 348 aaKnown RBP12.88□□□□□ -0.35
RETREG1-203ENST00000506441 SHROOM4Q9ULL8 1493 aa12.88□□□□□ -0.35
RETREG1-203ENST00000506441 ZNF211Q13398 564 aaPredicted RBP12.87□□□□□ -0.35
RETREG1-203ENST00000506441 DGKZQ13574 1117 aa12.87□□□□□ -0.35
RETREG1-203ENST00000506441 IFT43Q96FT9 208 aa12.87□□□□□ -0.35
RETREG1-203ENST00000506441 GMCL1Q96IK5 515 aa12.87□□□□□ -0.35
RETREG1-203ENST00000506441 PTSQ03393 145 aa12.86□□□□□ -0.35
RETREG1-203ENST00000506441 NOM1Q5C9Z4 860 aaKnown RBP12.86□□□□□ -0.35
RETREG1-203ENST00000506441 RIPOR1Q6ZS17 1223 aa12.86□□□□□ -0.35
RETREG1-203ENST00000506441 SAP130Q9H0E3 1048 aa12.86□□□□□ -0.35
RETREG1-203ENST00000506441 ANO2Q9NQ90 1003 aa12.86□□□□□ -0.35
RETREG1-203ENST00000506441 CCDC27Q2M243 656 aa12.85□□□□□ -0.35
RETREG1-203ENST00000506441 NLRP8Q86W28 1048 aa12.85□□□□□ -0.35
RETREG1-203ENST00000506441 GPAMQ9HCL2 828 aa12.85□□□□□ -0.35
RETREG1-203ENST00000506441 PCSK2P16519 638 aa12.84□□□□□ -0.35
RETREG1-203ENST00000506441 FIGNL1Q6PIW4 674 aa12.84□□□□□ -0.35
RETREG1-203ENST00000506441 ZIC5Q96T25 663 aa12.84□□□□□ -0.35
RETREG1-203ENST00000506441 CRISPLD1Q9H336 500 aa12.84□□□□□ -0.35
RETREG1-203ENST00000506441 A0A1W2PNR3 127 aa12.83□□□□□ -0.36
RETREG1-203ENST00000506441 NPR3P17342 541 aa12.83□□□□□ -0.36
RETREG1-203ENST00000506441 IER5Q5VY09 327 aa12.83□□□□□ -0.36
RETREG1-203ENST00000506441 TTC16Q8NEE8 873 aa12.83□□□□□ -0.36
RETREG1-203ENST00000506441 LRFN2Q9ULH4 789 aa12.83□□□□□ -0.36
RETREG1-203ENST00000506441 UNC13AQ9UPW8 1703 aa12.82□□□□□ -0.36
RETREG1-203ENST00000506441 SLC35F4A4IF30 521 aa12.82□□□□□ -0.36
RETREG1-203ENST00000506441 TGFBR3LH3BV60 316 aa12.82□□□□□ -0.36
RETREG1-203ENST00000506441 SUSD3Q96L08 255 aa12.82□□□□□ -0.36
RETREG1-203ENST00000506441 KLK14Q9P0G3 267 aa12.82□□□□□ -0.36
RETREG1-203ENST00000506441 SOBPA7XYQ1 873 aa12.81□□□□□ -0.36
RETREG1-203ENST00000506441 RPLP1P05386 114 aaKnown RBP12.81□□□□□ -0.36
RETREG1-203ENST00000506441 ATP4AP20648 1035 aa12.81□□□□□ -0.36
RETREG1-203ENST00000506441 FOXR1Q6PIV2 292 aa12.81□□□□□ -0.36
RETREG1-203ENST00000506441 EPB42P16452 691 aa12.8□□□□□ -0.36
RETREG1-203ENST00000506441 CCDC155Q8N6L0 562 aa12.8□□□□□ -0.36
RETREG1-203ENST00000506441 RUBCNLQ9H714 662 aa12.8□□□□□ -0.36
RETREG1-203ENST00000506441 SCRIBQ14160 1630 aa12.8□□□□□ -0.36
RETREG1-203ENST00000506441 NDUFB5O43674 189 aa12.79□□□□□ -0.36
RETREG1-203ENST00000506441 MPSTP25325 297 aa12.79□□□□□ -0.36
RETREG1-203ENST00000506441 MTMR3Q13615 1198 aa12.79□□□□□ -0.36
RETREG1-203ENST00000506441 LRRC69Q6ZNQ3 347 aa12.79□□□□□ -0.36
RETREG1-203ENST00000506441 BRPF3Q9ULD4 1205 aa12.79□□□□□ -0.36
RETREG1-203ENST00000506441 TNFRSF10BO14763 440 aa12.78□□□□□ -0.36
RETREG1-203ENST00000506441 MICAL2O94851 1124 aa12.78□□□□□ -0.36
RETREG1-203ENST00000506441 USP5P45974 858 aa12.78□□□□□ -0.36
RETREG1-203ENST00000506441 TREML1Q86YW5 311 aa12.78□□□□□ -0.36
RETREG1-203ENST00000506441 C7orf43Q8WVR3 580 aa12.78□□□□□ -0.36
RETREG1-203ENST00000506441 NUCKS1Q9H1E3 243 aaKnown RBP12.78□□□□□ -0.36
RETREG1-203ENST00000506441 SENP3-EIF4A1A0A087X0R7 540 aa12.77□□□□□ -0.37
RETREG1-203ENST00000506441 SNRPBP14678 240 aaKnown RBP12.77□□□□□ -0.37
RETREG1-203ENST00000506441 EIF1AXP47813 144 aaKnown RBP12.77□□□□□ -0.37
RETREG1-203ENST00000506441 MARSP56192 900 aaKnown RBP12.77□□□□□ -0.37
RETREG1-203ENST00000506441 ZSCAN29Q8IWY8 852 aaPredicted RBP12.77□□□□□ -0.37
RETREG1-203ENST00000506441 PIK3R5Q8WYR1 880 aa12.77□□□□□ -0.37
RETREG1-203ENST00000506441 CITED4Q96RK1 184 aa12.77□□□□□ -0.37
RETREG1-203ENST00000506441 ERCC3P19447 782 aa12.76□□□□□ -0.37
RETREG1-203ENST00000506441 SAMD5Q5TGI4 173 aa12.76□□□□□ -0.37
RETREG1-203ENST00000506441 TRIM22Q8IYM9 498 aa12.76□□□□□ -0.37
RETREG1-203ENST00000506441 CEP63Q96MT8 703 aa12.76□□□□□ -0.37
RETREG1-203ENST00000506441 PHF24Q9UPV7 400 aa12.76□□□□□ -0.37
RETREG1-203ENST00000506441 ZAP70P43403 619 aa12.75□□□□□ -0.37
RETREG1-203ENST00000506441 ARSDP51689 593 aa12.75□□□□□ -0.37
RETREG1-203ENST00000506441 MFAP1P55081 439 aaKnown RBP12.75□□□□□ -0.37
RETREG1-203ENST00000506441 BTLAQ7Z6A9 289 aa12.75□□□□□ -0.37
RETREG1-203ENST00000506441 DCTN4Q9UJW0 460 aa12.75□□□□□ -0.37
RETREG1-203ENST00000506441 FNDC3AQ9Y2H6 1198 aaKnown RBP12.75□□□□□ -0.37
RETREG1-203ENST00000506441 ITGA6P23229 1130 aa12.74□□□□□ -0.37
RETREG1-203ENST00000506441 PDE3BQ13370 1112 aa12.74□□□□□ -0.37
RETREG1-203ENST00000506441 PCDHGC4Q9Y5F7 938 aa12.74□□□□□ -0.37
RETREG1-203ENST00000506441 ATXN7O15265 892 aaPredicted RBP12.73□□□□□ -0.37
RETREG1-203ENST00000506441 MAPK1P28482 360 aa12.73□□□□□ -0.37
RETREG1-203ENST00000506441 MZF1P28698 734 aaPredicted RBP12.73□□□□□ -0.37
RETREG1-203ENST00000506441 IDH3AP50213 366 aa12.73□□□□□ -0.37
RETREG1-203ENST00000506441 ZNF280CQ8ND82 737 aa12.73□□□□□ -0.37
RETREG1-203ENST00000506441 HSH2DQ96JZ2 352 aa12.73□□□□□ -0.37
RETREG1-203ENST00000506441 TRERF1Q96PN7 1200 aa12.73□□□□□ -0.37
RETREG1-203ENST00000506441 ZCCHC2Q9C0B9 1178 aaKnown RBP12.73□□□□□ -0.37
RETREG1-203ENST00000506441 ETFBKMTQ8IXQ9 262 aa12.72□□□□□ -0.37
RETREG1-203ENST00000506441 TMC1Q8TDI8 760 aa12.72□□□□□ -0.37
RETREG1-203ENST00000506441 C11orf16Q9NQ32 467 aa12.72□□□□□ -0.37
RETREG1-203ENST00000506441 ARHGAP4P98171 946 aa12.71□□□□□ -0.37
RETREG1-203ENST00000506441 EHHADHQ08426 723 aa12.71□□□□□ -0.37
RETREG1-203ENST00000506441 DNM1Q05193 864 aaKnown RBP12.7□□□□□ -0.38
RETREG1-203ENST00000506441 LAMC2Q13753 1193 aa12.7□□□□□ -0.38
RETREG1-203ENST00000506441 SV2AQ7L0J3 742 aa12.7□□□□□ -0.38
RETREG1-203ENST00000506441 NPAS3Q8IXF0 933 aa12.7□□□□□ -0.38
RETREG1-203ENST00000506441 BCS1LQ9Y276 419 aa12.7□□□□□ -0.38
RETREG1-203ENST00000506441 PPFIA3O75145 1194 aa12.69□□□□□ -0.38
RETREG1-203ENST00000506441 ZNF787Q6DD87 383 aa12.69□□□□□ -0.38
RETREG1-203ENST00000506441 BRD7Q9NPI1 651 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms