RNA–Protein interactions for RNA: ENST00000506188.5

SNHG4-203, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 801 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-203ENST00000506188 TRIM35Q9UPQ4 493 aa18.24■□□□□ 0.51
SNHG4-203ENST00000506188 GNAI1P63096 354 aa18.23■□□□□ 0.51
SNHG4-203ENST00000506188 GPBP1L1Q9HC44 474 aaPredicted RBP18.23■□□□□ 0.51
SNHG4-203ENST00000506188 CNKSR1Q969H4 720 aa18.22■□□□□ 0.51
SNHG4-203ENST00000506188 MAP3K15Q6ZN16 1313 aa18.22■□□□□ 0.51
SNHG4-203ENST00000506188 HOXB7P09629 217 aa18.21■□□□□ 0.51
SNHG4-203ENST00000506188 VIRMAQ69YN4 1812 aaKnown RBP18.21■□□□□ 0.51
SNHG4-203ENST00000506188 FAM177BA6PVY3 158 aa18.2■□□□□ 0.5
SNHG4-203ENST00000506188 ZBTB3Q9H5J0 574 aa18.2■□□□□ 0.5
SNHG4-203ENST00000506188 IFT57Q9NWB7 429 aa18.2■□□□□ 0.5
SNHG4-203ENST00000506188 HSP90AB3PQ58FF7 597 aa18.19■□□□□ 0.5
SNHG4-203ENST00000506188 SOGA3Q5TF21 947 aa18.19■□□□□ 0.5
SNHG4-203ENST00000506188 HDGFL1Q5TGJ6 251 aa18.19■□□□□ 0.5
SNHG4-203ENST00000506188 STYK1Q6J9G0 422 aa18.19■□□□□ 0.5
SNHG4-203ENST00000506188 MASTLQ96GX5 879 aa18.19■□□□□ 0.5
SNHG4-203ENST00000506188 HLFQ16534 295 aa18.18■□□□□ 0.5
SNHG4-203ENST00000506188 PPP1R42Q7Z4L9 355 aa18.18■□□□□ 0.5
SNHG4-203ENST00000506188 CCDC24Q8N4L8 307 aa18.18■□□□□ 0.5
SNHG4-203ENST00000506188 NECTIN2Q92692 538 aa18.18■□□□□ 0.5
SNHG4-203ENST00000506188 ATP10DQ9P241 1426 aa18.17■□□□□ 0.5
SNHG4-203ENST00000506188 PARP10Q53GL7 1025 aa18.17■□□□□ 0.5
SNHG4-203ENST00000506188 C9orf131Q5VYM1 1079 aa18.17■□□□□ 0.5
SNHG4-203ENST00000506188 GIGYF2Q6Y7W6 1299 aaKnown RBP18.17■□□□□ 0.5
SNHG4-203ENST00000506188 TTLL7Q6ZT98 887 aa18.17■□□□□ 0.5
SNHG4-203ENST00000506188 ZNF526Q8TF50 670 aaPredicted RBP18.17■□□□□ 0.5
SNHG4-203ENST00000506188 DDX21Q9NR30 783 aaKnown RBP eCLIP18.17■□□□□ 0.5
SNHG4-203ENST00000506188 DBF4Q9UBU7 674 aaPredicted RBP18.17■□□□□ 0.5
SNHG4-203ENST00000506188 NPR1P16066 1061 aa18.16■□□□□ 0.5
SNHG4-203ENST00000506188 AIMP1Q12904 312 aaKnown RBP18.16■□□□□ 0.5
SNHG4-203ENST00000506188 MBIPQ9NS73 344 aa18.16■□□□□ 0.5
SNHG4-203ENST00000506188 SRGNP10124 158 aa18.15■□□□□ 0.5
SNHG4-203ENST00000506188 GPTP24298 496 aa18.15■□□□□ 0.5
SNHG4-203ENST00000506188 ALDH1B1P30837 517 aa18.15■□□□□ 0.5
SNHG4-203ENST00000506188 DUSP27Q5VZP5 1158 aa18.15■□□□□ 0.5
SNHG4-203ENST00000506188 COPS6Q7L5N1 327 aa18.15■□□□□ 0.5
SNHG4-203ENST00000506188 HYPKQ9NX55 129 aa18.15■□□□□ 0.5
SNHG4-203ENST00000506188 RNF181Q9P0P0 153 aa18.15■□□□□ 0.5
SNHG4-203ENST00000506188 KIF13BQ9NQT8 1826 aa18.14■□□□□ 0.5
SNHG4-203ENST00000506188 CHD4Q14839 1912 aa18.14■□□□□ 0.49
SNHG4-203ENST00000506188 LMNB1P20700 586 aa18.14■□□□□ 0.49
SNHG4-203ENST00000506188 CCDC27Q2M243 656 aa18.14■□□□□ 0.49
SNHG4-203ENST00000506188 NCBP3Q53F19 620 aaKnown RBP18.14■□□□□ 0.49
SNHG4-203ENST00000506188 XAGE3Q8WTP9 111 aa18.14■□□□□ 0.49
SNHG4-203ENST00000506188 TMX4Q9H1E5 349 aaPredicted RBP18.14■□□□□ 0.49
SNHG4-203ENST00000506188 C21orf2O43822 256 aa18.13■□□□□ 0.49
SNHG4-203ENST00000506188 C1QTNF8P60827 252 aa18.13■□□□□ 0.49
SNHG4-203ENST00000506188 PDIA6Q15084 440 aa18.13■□□□□ 0.49
SNHG4-203ENST00000506188 RPGRQ92834 1020 aaKnown RBP18.13■□□□□ 0.49
SNHG4-203ENST00000506188 ZNF219Q9P2Y4 722 aaPredicted RBP18.13■□□□□ 0.49
SNHG4-203ENST00000506188 KDM2BQ8NHM5 1336 aa18.13■□□□□ 0.49
SNHG4-203ENST00000506188 ZNF853P0CG23 659 aa18.12■□□□□ 0.49
SNHG4-203ENST00000506188 CCDC184Q52MB2 194 aa18.12■□□□□ 0.49
SNHG4-203ENST00000506188 ZNF34Q8IZ26 560 aa18.12■□□□□ 0.49
SNHG4-203ENST00000506188 UTP14AQ9BVJ6 771 aaKnown RBP18.12■□□□□ 0.49
SNHG4-203ENST00000506188 CHPF2Q9P2E5 772 aa18.12■□□□□ 0.49
SNHG4-203ENST00000506188 SCN7AQ01118 1682 aa18.12■□□□□ 0.49
SNHG4-203ENST00000506188 KLRG2A4D1S0 409 aaPredicted RBP18.11■□□□□ 0.49
SNHG4-203ENST00000506188 ANXA1P04083 346 aa18.11■□□□□ 0.49
SNHG4-203ENST00000506188 KRT24Q2M2I5 525 aa18.11■□□□□ 0.49
SNHG4-203ENST00000506188 PRPF40BQ6NWY9 871 aaKnown RBP18.11■□□□□ 0.49
SNHG4-203ENST00000506188 ANKRD13DQ6ZTN6 518 aa18.11■□□□□ 0.49
SNHG4-203ENST00000506188 NLRP3Q96P20 1036 aa18.11■□□□□ 0.49
SNHG4-203ENST00000506188 ZC3H4Q9UPT8 1303 aaKnown RBP18.11■□□□□ 0.49
SNHG4-203ENST00000506188 ADCY9O60503 1353 aa18.11■□□□□ 0.49
SNHG4-203ENST00000506188 KDM3BQ7LBC6 1761 aa18.11■□□□□ 0.49
SNHG4-203ENST00000506188 DLG5Q8TDM6 1919 aa18.11■□□□□ 0.49
SNHG4-203ENST00000506188 IBTKQ9P2D0 1353 aaPredicted RBP18.1■□□□□ 0.49
SNHG4-203ENST00000506188 RNF123Q5XPI4 1314 aa18.1■□□□□ 0.49
SNHG4-203ENST00000506188 PROSER3Q2NL68 480 aa18.1■□□□□ 0.49
SNHG4-203ENST00000506188 CCDC30Q5VVM6 783 aa18.1■□□□□ 0.49
SNHG4-203ENST00000506188 C16orf71Q8IYS4 520 aaPredicted RBP18.1■□□□□ 0.49
SNHG4-203ENST00000506188 N4BP2Q86UW6 1770 aaPredicted RBP18.09■□□□□ 0.49
SNHG4-203ENST00000506188 ELL2O00472 640 aaPredicted RBP18.09■□□□□ 0.49
SNHG4-203ENST00000506188 DDX58O95786 925 aaKnown RBP18.09■□□□□ 0.49
SNHG4-203ENST00000506188 GOLGA2Q08379 1002 aa18.09■□□□□ 0.49
SNHG4-203ENST00000506188 TCIRG1Q13488 830 aa18.09■□□□□ 0.49
SNHG4-203ENST00000506188 ERFEQ4G0M1 354 aa18.09■□□□□ 0.49
SNHG4-203ENST00000506188 SUSD4Q5VX71 490 aa18.09■□□□□ 0.49
SNHG4-203ENST00000506188 DPY19L2Q6NUT2 758 aa18.09■□□□□ 0.49
SNHG4-203ENST00000506188 NUTM1Q86Y26 1132 aa18.09■□□□□ 0.49
SNHG4-203ENST00000506188 WWC1Q8IX03 1113 aa18.09■□□□□ 0.49
SNHG4-203ENST00000506188 FAM9BQ8IZU0 186 aa18.09■□□□□ 0.49
SNHG4-203ENST00000506188 PLBD2Q8NHP8 589 aa18.09■□□□□ 0.49
SNHG4-203ENST00000506188 RBM17Q96I25 401 aaKnown RBP18.09■□□□□ 0.49
SNHG4-203ENST00000506188 TAOK3Q9H2K8 898 aa18.09■□□□□ 0.49
SNHG4-203ENST00000506188 UTRNP46939 3433 aa18.09■□□□□ 0.49
SNHG4-203ENST00000506188 IL16Q14005 1332 aa18.08■□□□□ 0.49
SNHG4-203ENST00000506188 CCDC93Q567U6 631 aa18.08■□□□□ 0.48
SNHG4-203ENST00000506188 CC2D2BQ6DHV5 1058 aa18.08■□□□□ 0.48
SNHG4-203ENST00000506188 RTKN2Q8IZC4 609 aa18.08■□□□□ 0.48
SNHG4-203ENST00000506188 STK31Q9BXU1 1019 aa18.08■□□□□ 0.48
SNHG4-203ENST00000506188 TRMT112Q9UI30 125 aaKnown RBP18.08■□□□□ 0.48
SNHG4-203ENST00000506188 NRXN2Q9P2S2 1712 aa18.08■□□□□ 0.48
SNHG4-203ENST00000506188 HSP90B1P14625 803 aaKnown RBP18.07■□□□□ 0.48
SNHG4-203ENST00000506188 GRIPAP1Q4V328 841 aa18.07■□□□□ 0.48
SNHG4-203ENST00000506188 LRP10Q7Z4F1 713 aa18.07■□□□□ 0.48
SNHG4-203ENST00000506188 RIC3Q7Z5B4 369 aa18.07■□□□□ 0.48
SNHG4-203ENST00000506188 LAMB4A4D0S4 1761 aa18.07■□□□□ 0.48
SNHG4-203ENST00000506188 RASSF7Q02833 373 aa18.06■□□□□ 0.48
SNHG4-203ENST00000506188 WDR63Q8IWG1 891 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms