RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 RGL2O15211 777 aa13.7□□□□□ -0.22
NR1I3-222ENST00000506018 CAMTA2O94983 1202 aa13.7□□□□□ -0.22
NR1I3-222ENST00000506018 CNBD1Q8NA66 436 aa13.7□□□□□ -0.22
NR1I3-222ENST00000506018 BRIP1Q9BX63 1249 aa13.7□□□□□ -0.22
NR1I3-222ENST00000506018 MIS18AQ9NYP9 233 aa13.7□□□□□ -0.22
NR1I3-222ENST00000506018 ANKRD31Q8N7Z5 1873 aa13.69□□□□□ -0.22
NR1I3-222ENST00000506018 PRAMEF22A3QJZ6 481 aa13.69□□□□□ -0.22
NR1I3-222ENST00000506018 RIPK4P57078 832 aa13.69□□□□□ -0.22
NR1I3-222ENST00000506018 CACNB1Q02641 598 aaPredicted RBP13.69□□□□□ -0.22
NR1I3-222ENST00000506018 PIP4K2AP48426 406 aaPredicted RBP13.68□□□□□ -0.22
NR1I3-222ENST00000506018 C9orf131Q5VYM1 1079 aa13.68□□□□□ -0.22
NR1I3-222ENST00000506018 PRR5LQ6MZQ0 368 aa13.68□□□□□ -0.22
NR1I3-222ENST00000506018 NBPF5PQ86XG9 351 aaPredicted RBP13.68□□□□□ -0.22
NR1I3-222ENST00000506018 TSPYL4Q9UJ04 414 aa13.68□□□□□ -0.22
NR1I3-222ENST00000506018 CACNA1SQ13698 1873 aa13.68□□□□□ -0.22
NR1I3-222ENST00000506018 CCDC88AQ3V6T2 1871 aa13.68□□□□□ -0.22
NR1I3-222ENST00000506018 EIF4A1P60842 406 aaKnown RBP13.67□□□□□ -0.22
NR1I3-222ENST00000506018 KIF6Q6ZMV9 814 aa13.67□□□□□ -0.22
NR1I3-222ENST00000506018 ZNF622Q969S3 477 aaKnown RBP eCLIP13.67□□□□□ -0.22
NR1I3-222ENST00000506018 BABAM1Q9NWV8 329 aa13.67□□□□□ -0.22
NR1I3-222ENST00000506018 RNF181Q9P0P0 153 aa13.67□□□□□ -0.22
NR1I3-222ENST00000506018 NUP98P52948 1817 aa13.66□□□□□ -0.22
NR1I3-222ENST00000506018 KDM2BQ8NHM5 1336 aa13.66□□□□□ -0.22
NR1I3-222ENST00000506018 TMPOP42166 694 aaKnown RBP13.66□□□□□ -0.22
NR1I3-222ENST00000506018 TPTE2Q6XPS3 522 aa13.66□□□□□ -0.22
NR1I3-222ENST00000506018 THUMPD2Q9BTF0 503 aaKnown RBP13.66□□□□□ -0.22
NR1I3-222ENST00000506018 SPINK5Q9NQ38 1064 aaPredicted RBP13.66□□□□□ -0.22
NR1I3-222ENST00000506018 NIP7Q9Y221 180 aaKnown RBP eCLIP13.66□□□□□ -0.22
NR1I3-222ENST00000506018 ERBB4Q15303 1308 aa13.65□□□□□ -0.22
NR1I3-222ENST00000506018 NBPF26B4DH59 902 aa13.65□□□□□ -0.22
NR1I3-222ENST00000506018 GTF2E1P29083 439 aaPredicted RBP13.65□□□□□ -0.22
NR1I3-222ENST00000506018 NBPF10Q6P3W6 841 aaKnown RBP13.65□□□□□ -0.22
NR1I3-222ENST00000506018 NBPF15Q8N660 670 aa13.65□□□□□ -0.22
NR1I3-222ENST00000506018 CNKSR1Q969H4 720 aa13.65□□□□□ -0.22
NR1I3-222ENST00000506018 RUNDC1Q96C34 613 aa13.65□□□□□ -0.22
NR1I3-222ENST00000506018 ARFGEF2Q9Y6D5 1785 aa13.65□□□□□ -0.22
NR1I3-222ENST00000506018 COL11A2P13942 1736 aaPredicted RBP13.65□□□□□ -0.22
NR1I3-222ENST00000506018 ZC3H4Q9UPT8 1303 aaKnown RBP13.64□□□□□ -0.23
NR1I3-222ENST00000506018 LMNB1P20700 586 aa13.64□□□□□ -0.23
NR1I3-222ENST00000506018 SOGA3Q5TF21 947 aa13.64□□□□□ -0.23
NR1I3-222ENST00000506018 C16orf71Q8IYS4 520 aaPredicted RBP13.64□□□□□ -0.23
NR1I3-222ENST00000506018 PRKRIP1Q9H875 184 aaPredicted RBP13.64□□□□□ -0.23
NR1I3-222ENST00000506018 RRP7AQ9Y3A4 280 aaKnown RBP13.64□□□□□ -0.23
NR1I3-222ENST00000506018 ERVV-1B6SEH8 477 aa13.63□□□□□ -0.23
NR1I3-222ENST00000506018 NEUROD2Q15784 382 aa13.63□□□□□ -0.23
NR1I3-222ENST00000506018 STYK1Q6J9G0 422 aa13.63□□□□□ -0.23
NR1I3-222ENST00000506018 CCDC146Q8IYE0 955 aa13.63□□□□□ -0.23
NR1I3-222ENST00000506018 NGEFQ8N5V2 710 aa13.63□□□□□ -0.23
NR1I3-222ENST00000506018 MASTLQ96GX5 879 aa13.63□□□□□ -0.23
NR1I3-222ENST00000506018 NYXQ9GZU5 481 aa13.63□□□□□ -0.23
NR1I3-222ENST00000506018 TNRC6CQ9HCJ0 1690 aaKnown RBP13.63□□□□□ -0.23
NR1I3-222ENST00000506018 FER1L6Q2WGJ9 1857 aa13.63□□□□□ -0.23
NR1I3-222ENST00000506018 DICER1Q9UPY3 1922 aaKnown RBP13.62□□□□□ -0.23
NR1I3-222ENST00000506018 CAPN15O75808 1086 aa13.62□□□□□ -0.23
NR1I3-222ENST00000506018 MYL6BP14649 208 aa13.62□□□□□ -0.23
NR1I3-222ENST00000506018 CCDC24Q8N4L8 307 aa13.62□□□□□ -0.23
NR1I3-222ENST00000506018 MAP3K15Q6ZN16 1313 aa13.62□□□□□ -0.23
NR1I3-222ENST00000506018 KIF3CO14782 793 aa13.61□□□□□ -0.23
NR1I3-222ENST00000506018 TOMM70O94826 608 aa13.61□□□□□ -0.23
NR1I3-222ENST00000506018 SRGNP10124 158 aa13.61□□□□□ -0.23
NR1I3-222ENST00000506018 RASSF7Q02833 373 aa13.61□□□□□ -0.23
NR1I3-222ENST00000506018 TIAM2Q8IVF5 1701 aa13.61□□□□□ -0.23
NR1I3-222ENST00000506018 SLX4Q8IY92 1834 aa13.6□□□□□ -0.23
NR1I3-222ENST00000506018 C21orf2O43822 256 aa13.6□□□□□ -0.23
NR1I3-222ENST00000506018 NPR1P16066 1061 aa13.6□□□□□ -0.23
NR1I3-222ENST00000506018 EIF2S2P20042 333 aaKnown RBP13.6□□□□□ -0.23
NR1I3-222ENST00000506018 ADAMTS8Q9UP79 889 aa13.6□□□□□ -0.23
NR1I3-222ENST00000506018 FAM177BA6PVY3 158 aa13.59□□□□□ -0.23
NR1I3-222ENST00000506018 HLFQ16534 295 aa13.59□□□□□ -0.23
NR1I3-222ENST00000506018 PRPF40BQ6NWY9 871 aaKnown RBP13.59□□□□□ -0.23
NR1I3-222ENST00000506018 ZNF219Q9P2Y4 722 aaPredicted RBP13.59□□□□□ -0.23
NR1I3-222ENST00000506018 LAS1LQ9Y4W2 734 aaKnown RBP13.59□□□□□ -0.23
NR1I3-222ENST00000506018 HSPA6P17066 643 aa13.58□□□□□ -0.23
NR1I3-222ENST00000506018 ALDH1B1P30837 517 aa13.58□□□□□ -0.23
NR1I3-222ENST00000506018 CALD1Q05682 793 aaKnown RBP13.58□□□□□ -0.23
NR1I3-222ENST00000506018 DPY19L2Q6NUT2 758 aa13.58□□□□□ -0.23
NR1I3-222ENST00000506018 TAOK3Q9H2K8 898 aa13.58□□□□□ -0.23
NR1I3-222ENST00000506018 NMRK2Q9NPI5 230 aa13.58□□□□□ -0.23
NR1I3-222ENST00000506018 IBTKQ9P2D0 1353 aaPredicted RBP13.58□□□□□ -0.24
NR1I3-222ENST00000506018 TTLL7Q6ZT98 887 aa13.58□□□□□ -0.24
NR1I3-222ENST00000506018 PPP1R42Q7Z4L9 355 aa13.58□□□□□ -0.24
NR1I3-222ENST00000506018 ZBTB3Q9H5J0 574 aa13.58□□□□□ -0.24
NR1I3-222ENST00000506018 LTBP3Q9NS15 1303 aa13.57□□□□□ -0.24
NR1I3-222ENST00000506018 ANKRD36CQ5JPF3 1778 aa13.57□□□□□ -0.24
NR1I3-222ENST00000506018 KLRG2A4D1S0 409 aaPredicted RBP13.57□□□□□ -0.24
NR1I3-222ENST00000506018 NFKBIEO00221 500 aa13.57□□□□□ -0.24
NR1I3-222ENST00000506018 CHL1O00533 1208 aa13.57□□□□□ -0.24
NR1I3-222ENST00000506018 ERFEQ4G0M1 354 aa13.57□□□□□ -0.24
NR1I3-222ENST00000506018 PARP10Q53GL7 1025 aa13.57□□□□□ -0.24
NR1I3-222ENST00000506018 CCDC93Q567U6 631 aa13.57□□□□□ -0.24
NR1I3-222ENST00000506018 HSP90AB3PQ58FF7 597 aa13.57□□□□□ -0.24
NR1I3-222ENST00000506018 GIGYF2Q6Y7W6 1299 aaKnown RBP13.57□□□□□ -0.24
NR1I3-222ENST00000506018 RBM46Q8TBY0 533 aaKnown RBP13.57□□□□□ -0.24
NR1I3-222ENST00000506018 GLTPD2A6NH11 291 aa13.56□□□□□ -0.24
NR1I3-222ENST00000506018 HOXB7P09629 217 aa13.56□□□□□ -0.24
NR1I3-222ENST00000506018 GPTP24298 496 aa13.56□□□□□ -0.24
NR1I3-222ENST00000506018 RPGRQ92834 1020 aaKnown RBP13.56□□□□□ -0.24
NR1I3-222ENST00000506018 RRAGCQ9HB90 399 aa13.56□□□□□ -0.24
NR1I3-222ENST00000506018 TRIM35Q9UPQ4 493 aa13.56□□□□□ -0.24
NR1I3-222ENST00000506018 RTKN2Q8IZC4 609 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms