RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 CCDC9Q9Y3X0 531 aaKnown RBP10.52□□□□□ -0.73
CHD1-204ENST00000505982 TMEM229AB2RXF0 380 aa10.51□□□□□ -0.73
CHD1-204ENST00000505982 FAM157BP0CG42 384 aa10.51□□□□□ -0.73
CHD1-204ENST00000505982 USTQ9Y2C2 406 aa10.51□□□□□ -0.73
CHD1-204ENST00000505982 SRPK2P78362 688 aaKnown RBP10.5□□□□□ -0.73
CHD1-204ENST00000505982 ZNF468Q5VIY5 522 aaPredicted RBP10.5□□□□□ -0.73
CHD1-204ENST00000505982 ZNF295-AS1Q8N0V1 137 aa10.5□□□□□ -0.73
CHD1-204ENST00000505982 MARK1Q9P0L2 795 aa10.5□□□□□ -0.73
CHD1-204ENST00000505982 HCN2Q9UL51 889 aa10.5□□□□□ -0.73
CHD1-204ENST00000505982 IQSEC3Q9UPP2 1182 aaPredicted RBP10.5□□□□□ -0.73
CHD1-204ENST00000505982 SKIP12755 728 aa10.49□□□□□ -0.73
CHD1-204ENST00000505982 PCBP4P57723 403 aaKnown RBP10.49□□□□□ -0.73
CHD1-204ENST00000505982 BICDL1Q6ZP65 573 aa10.49□□□□□ -0.73
CHD1-204ENST00000505982 PIK3CDO00329 1044 aa10.48□□□□□ -0.73
CHD1-204ENST00000505982 BACH1O14867 736 aa10.48□□□□□ -0.73
CHD1-204ENST00000505982 LAMC2Q13753 1193 aa10.48□□□□□ -0.73
CHD1-204ENST00000505982 SAMD5Q5TGI4 173 aa10.48□□□□□ -0.73
CHD1-204ENST00000505982 PLVAPQ9BX97 442 aa10.48□□□□□ -0.73
CHD1-204ENST00000505982 VRTNQ9H8Y1 702 aa10.48□□□□□ -0.73
CHD1-204ENST00000505982 ALAS2P22557 587 aa10.47□□□□□ -0.73
CHD1-204ENST00000505982 ATG7O95352 703 aa10.46□□□□□ -0.73
CHD1-204ENST00000505982 SPATA31C1P0DKV0 1188 aa10.46□□□□□ -0.73
CHD1-204ENST00000505982 GATA4P43694 442 aa10.46□□□□□ -0.73
CHD1-204ENST00000505982 DOC2BQ14184 412 aa10.46□□□□□ -0.73
CHD1-204ENST00000505982 TRIM11Q96F44 468 aa10.46□□□□□ -0.73
CHD1-204ENST00000505982 USP3Q9Y6I4 520 aa10.46□□□□□ -0.73
CHD1-204ENST00000505982 ELOA3CA0A087WX78 387 aaPredicted RBP10.45□□□□□ -0.74
CHD1-204ENST00000505982 USP17L3A6NCW0 530 aa10.45□□□□□ -0.74
CHD1-204ENST00000505982 USP17L4A6NCW7 530 aa10.45□□□□□ -0.74
CHD1-204ENST00000505982 SPDYE3A6NKU9 549 aa10.45□□□□□ -0.74
CHD1-204ENST00000505982 ELOA3DA6NLF2 546 aaPredicted RBP10.45□□□□□ -0.74
CHD1-204ENST00000505982 EML3Q32P44 896 aa10.45□□□□□ -0.74
CHD1-204ENST00000505982 ELOA3BQ3SY89 546 aa10.45□□□□□ -0.74
CHD1-204ENST00000505982 USP17L2Q6R6M4 530 aa10.45□□□□□ -0.74
CHD1-204ENST00000505982 USP17L1Q7RTZ2 530 aa10.45□□□□□ -0.74
CHD1-204ENST00000505982 NFATC2IPQ8NCF5 419 aa10.45□□□□□ -0.74
CHD1-204ENST00000505982 ELOA3Q8NG57 546 aa10.45□□□□□ -0.74
CHD1-204ENST00000505982 SEMA6BQ9H3T3 888 aa10.45□□□□□ -0.74
CHD1-204ENST00000505982 PCDHGA11Q9Y5H2 935 aa10.45□□□□□ -0.74
CHD1-204ENST00000505982 CARNS1A5YM72 827 aa10.44□□□□□ -0.74
CHD1-204ENST00000505982 USP17L5A8MUK1 530 aa10.44□□□□□ -0.74
CHD1-204ENST00000505982 PATL2C9JE40 543 aaKnown RBP10.44□□□□□ -0.74
CHD1-204ENST00000505982 EFSO43281 561 aa10.44□□□□□ -0.74
CHD1-204ENST00000505982 STRN4Q9NRL3 753 aa10.44□□□□□ -0.74
CHD1-204ENST00000505982 PARP3Q9Y6F1 533 aa10.44□□□□□ -0.74
CHD1-204ENST00000505982 LZTS3O60299 673 aaPredicted RBP10.43□□□□□ -0.74
CHD1-204ENST00000505982 DEPDC4Q8N2C3 294 aa10.43□□□□□ -0.74
CHD1-204ENST00000505982 NOD1Q9Y239 953 aa10.43□□□□□ -0.74
CHD1-204ENST00000505982 BRD1O95696 1058 aa10.42□□□□□ -0.74
CHD1-204ENST00000505982 SYT9Q86SS6 491 aa10.42□□□□□ -0.74
CHD1-204ENST00000505982 GZF1Q9H116 711 aaPredicted RBP10.42□□□□□ -0.74
CHD1-204ENST00000505982 NEUROD4Q9HD90 331 aa10.42□□□□□ -0.74
CHD1-204ENST00000505982 SCHIP1Q9P0W5 487 aaPredicted RBP10.42□□□□□ -0.74
CHD1-204ENST00000505982 TXLNAP40222 546 aa10.41□□□□□ -0.74
CHD1-204ENST00000505982 PRRT3Q5FWE3 981 aa10.41□□□□□ -0.74
CHD1-204ENST00000505982 L3MBTL2Q969R5 705 aa10.41□□□□□ -0.74
CHD1-204ENST00000505982 PSME1Q06323 249 aa10.4□□□□□ -0.74
CHD1-204ENST00000505982 TEAD4Q15561 434 aa10.4□□□□□ -0.74
CHD1-204ENST00000505982 KANK4Q5T7N3 995 aaPredicted RBP10.4□□□□□ -0.74
CHD1-204ENST00000505982 NOS2P35228 1153 aa10.39□□□□□ -0.75
CHD1-204ENST00000505982 GTF2IP78347 998 aa10.39□□□□□ -0.75
CHD1-204ENST00000505982 KCNA1Q09470 495 aa10.39□□□□□ -0.75
CHD1-204ENST00000505982 TMCO4Q5TGY1 634 aa10.39□□□□□ -0.75
CHD1-204ENST00000505982 LRRC69Q6ZNQ3 347 aa10.39□□□□□ -0.75
CHD1-204ENST00000505982 PLEKHM2Q8IWE5 1019 aa10.39□□□□□ -0.75
CHD1-204ENST00000505982 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.39□□□□□ -0.75
CHD1-204ENST00000505982 ZNF358Q9NW07 568 aa10.39□□□□□ -0.75
CHD1-204ENST00000505982 GPC6Q9Y625 555 aaPredicted RBP10.39□□□□□ -0.75
CHD1-204ENST00000505982 SIN3BO75182 1162 aa10.38□□□□□ -0.75
CHD1-204ENST00000505982 APBA3O96018 575 aa10.38□□□□□ -0.75
CHD1-204ENST00000505982 ITGB7P26010 798 aa10.38□□□□□ -0.75
CHD1-204ENST00000505982 RANGAP1P46060 587 aaPredicted RBP10.38□□□□□ -0.75
CHD1-204ENST00000505982 NCOA4Q13772 614 aa10.38□□□□□ -0.75
CHD1-204ENST00000505982 ZDHHC1Q8WTX9 485 aa10.38□□□□□ -0.75
CHD1-204ENST00000505982 MKRN1Q9UHC7 482 aaKnown RBP10.38□□□□□ -0.75
CHD1-204ENST00000505982 EML1O00423 815 aa10.37□□□□□ -0.75
CHD1-204ENST00000505982 ZMYM1Q5SVZ6 1142 aa10.37□□□□□ -0.75
CHD1-204ENST00000505982 LARP1Q6PKG0 1096 aaKnown RBP10.37□□□□□ -0.75
CHD1-204ENST00000505982 NOVA2Q9UNW9 492 aaKnown RBP10.37□□□□□ -0.75
CHD1-204ENST00000505982 ZNF232Q9UNY5 417 aa10.37□□□□□ -0.75
CHD1-204ENST00000505982 TMEM88BA6NKF7 163 aa10.36□□□□□ -0.75
CHD1-204ENST00000505982 ADARB2-AS1A8MUL3 147 aa10.36□□□□□ -0.75
CHD1-204ENST00000505982 MDFIQ99750 246 aa10.36□□□□□ -0.75
CHD1-204ENST00000505982 USP17L15C9J2P7 530 aa10.35□□□□□ -0.75
CHD1-204ENST00000505982 USP17L10C9JJH3 530 aa10.35□□□□□ -0.75
CHD1-204ENST00000505982 USP17L13C9JLJ4 530 aa10.35□□□□□ -0.75
CHD1-204ENST00000505982 USP17L12C9JPN9 530 aa10.35□□□□□ -0.75
CHD1-204ENST00000505982 USP17L11C9JVI0 530 aa10.35□□□□□ -0.75
CHD1-204ENST00000505982 USP17L21D6R901 530 aa10.35□□□□□ -0.75
CHD1-204ENST00000505982 USP17L18D6R9N7 530 aa10.35□□□□□ -0.75
CHD1-204ENST00000505982 USP17L22D6RA61 530 aa10.35□□□□□ -0.75
CHD1-204ENST00000505982 USP17L17D6RBQ6 530 aa10.35□□□□□ -0.75
CHD1-204ENST00000505982 USP17L19D6RCP7 530 aa10.35□□□□□ -0.75
CHD1-204ENST00000505982 USP17L20D6RJB6 530 aa10.35□□□□□ -0.75
CHD1-204ENST00000505982 M0R082 166 aa10.35□□□□□ -0.75
CHD1-204ENST00000505982 RASA1P20936 1047 aa10.35□□□□□ -0.75
CHD1-204ENST00000505982 USP17L24Q0WX57 530 aa10.35□□□□□ -0.75
CHD1-204ENST00000505982 NEUROD1Q13562 356 aa10.35□□□□□ -0.75
CHD1-204ENST00000505982 ELOAQ14241 798 aaKnown RBP10.35□□□□□ -0.75
CHD1-204ENST00000505982 B4GALNT3Q6L9W6 998 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms