RNA–Protein interactions for RNA: ENST00000505417.1

SNRPCP13-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 13, humanhuman

BASIC

Gene SNRPCP13, Length 190 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP13-201ENST00000505417 MSH5O43196 834 aa13.18□□□□□ -0.3
SNRPCP13-201ENST00000505417 PROSER3Q2NL68 480 aa13.18□□□□□ -0.3
SNRPCP13-201ENST00000505417 DZIP3Q86Y13 1208 aaKnown RBP13.18□□□□□ -0.3
SNRPCP13-201ENST00000505417 BCL2L12Q9HB09 334 aa13.18□□□□□ -0.3
SNRPCP13-201ENST00000505417 TM4SF1P30408 202 aa13.17□□□□□ -0.3
SNRPCP13-201ENST00000505417 USPL1Q5W0Q7 1092 aa13.17□□□□□ -0.3
SNRPCP13-201ENST00000505417 KLHL34Q8N239 644 aa13.17□□□□□ -0.3
SNRPCP13-201ENST00000505417 STK31Q9BXU1 1019 aa13.17□□□□□ -0.3
SNRPCP13-201ENST00000505417 TBC1D2BQ9UPU7 963 aa13.17□□□□□ -0.3
SNRPCP13-201ENST00000505417 MAP3K15Q6ZN16 1313 aa13.16□□□□□ -0.3
SNRPCP13-201ENST00000505417 MYL6BP14649 208 aa13.16□□□□□ -0.3
SNRPCP13-201ENST00000505417 POLD1P28340 1107 aa13.16□□□□□ -0.3
SNRPCP13-201ENST00000505417 PIP4K2AP48426 406 aaPredicted RBP13.16□□□□□ -0.3
SNRPCP13-201ENST00000505417 FKBP8Q14318 412 aa13.16□□□□□ -0.3
SNRPCP13-201ENST00000505417 COPS6Q7L5N1 327 aa13.16□□□□□ -0.3
SNRPCP13-201ENST00000505417 SRP68Q9UHB9 627 aaKnown RBP13.16□□□□□ -0.3
SNRPCP13-201ENST00000505417 ZNF652Q9Y2D9 606 aa13.16□□□□□ -0.3
SNRPCP13-201ENST00000505417 LAMB4A4D0S4 1761 aa13.16□□□□□ -0.3
SNRPCP13-201ENST00000505417 SLC4A2P04920 1241 aa13.15□□□□□ -0.3
SNRPCP13-201ENST00000505417 BRPF1P55201 1214 aaPredicted RBP13.15□□□□□ -0.3
SNRPCP13-201ENST00000505417 ALDH1L2Q3SY69 923 aa13.15□□□□□ -0.3
SNRPCP13-201ENST00000505417 KIF6Q6ZMV9 814 aa13.15□□□□□ -0.3
SNRPCP13-201ENST00000505417 TTLL7Q6ZT98 887 aa13.15□□□□□ -0.3
SNRPCP13-201ENST00000505417 ANKRD13DQ6ZTN6 518 aa13.15□□□□□ -0.3
SNRPCP13-201ENST00000505417 PLBD2Q8NHP8 589 aa13.15□□□□□ -0.3
SNRPCP13-201ENST00000505417 XAGE3Q8WTP9 111 aa13.15□□□□□ -0.3
SNRPCP13-201ENST00000505417 NECTIN2Q92692 538 aa13.15□□□□□ -0.3
SNRPCP13-201ENST00000505417 COL13A1Q5TAT6 717 aaPredicted RBP13.14□□□□□ -0.31
SNRPCP13-201ENST00000505417 GIGYF2Q6Y7W6 1299 aaKnown RBP13.14□□□□□ -0.31
SNRPCP13-201ENST00000505417 DNAJC5GQ8N7S2 189 aa13.14□□□□□ -0.31
SNRPCP13-201ENST00000505417 GPBP1L1Q9HC44 474 aaPredicted RBP13.14□□□□□ -0.31
SNRPCP13-201ENST00000505417 ZNF330Q9Y3S2 320 aaPredicted RBP13.14□□□□□ -0.31
SNRPCP13-201ENST00000505417 ADCY9O60503 1353 aa13.14□□□□□ -0.31
SNRPCP13-201ENST00000505417 GOLGB1Q14789 3259 aaKnown RBP13.13□□□□□ -0.31
SNRPCP13-201ENST00000505417 CAPN15O75808 1086 aa13.13□□□□□ -0.31
SNRPCP13-201ENST00000505417 ANXA1P04083 346 aa13.13□□□□□ -0.31
SNRPCP13-201ENST00000505417 MMP10P09238 476 aa13.13□□□□□ -0.31
SNRPCP13-201ENST00000505417 NFIXQ14938 502 aa13.13□□□□□ -0.31
SNRPCP13-201ENST00000505417 HSP90AB3PQ58FF7 597 aa13.13□□□□□ -0.31
SNRPCP13-201ENST00000505417 TUBGCP6Q96RT7 1819 aa13.12□□□□□ -0.31
SNRPCP13-201ENST00000505417 DDX58O95786 925 aaKnown RBP13.12□□□□□ -0.31
SNRPCP13-201ENST00000505417 TRIM28Q13263 835 aaKnown RBP13.12□□□□□ -0.31
SNRPCP13-201ENST00000505417 HLFQ16534 295 aa13.12□□□□□ -0.31
SNRPCP13-201ENST00000505417 ZNF34Q8IZ26 560 aa13.12□□□□□ -0.31
SNRPCP13-201ENST00000505417 ZNF526Q8TF50 670 aaPredicted RBP13.12□□□□□ -0.31
SNRPCP13-201ENST00000505417 SETDB2Q96T68 719 aa13.12□□□□□ -0.31
SNRPCP13-201ENST00000505417 PHAXQ9H814 394 aaKnown RBP13.12□□□□□ -0.31
SNRPCP13-201ENST00000505417 POLRMTO00411 1230 aaKnown RBP13.11□□□□□ -0.31
SNRPCP13-201ENST00000505417 GRIN3BO60391 1043 aa13.11□□□□□ -0.31
SNRPCP13-201ENST00000505417 FLIIQ13045 1269 aa13.11□□□□□ -0.31
SNRPCP13-201ENST00000505417 TCIRG1Q13488 830 aa13.11□□□□□ -0.31
SNRPCP13-201ENST00000505417 TBC1D9BQ66K14 1250 aa13.11□□□□□ -0.31
SNRPCP13-201ENST00000505417 MSL1Q68DK7 614 aa13.11□□□□□ -0.31
SNRPCP13-201ENST00000505417 KSR2Q6VAB6 950 aa13.11□□□□□ -0.31
SNRPCP13-201ENST00000505417 MRPL50Q8N5N7 158 aaKnown RBP13.11□□□□□ -0.31
SNRPCP13-201ENST00000505417 SSH1Q8WYL5 1049 aa13.11□□□□□ -0.31
SNRPCP13-201ENST00000505417 PARP3Q9Y6F1 533 aa13.11□□□□□ -0.31
SNRPCP13-201ENST00000505417 RARSP54136 660 aaKnown RBP13.1□□□□□ -0.31
SNRPCP13-201ENST00000505417 DDR1Q08345 913 aa13.1□□□□□ -0.31
SNRPCP13-201ENST00000505417 AIMP1Q12904 312 aaKnown RBP13.1□□□□□ -0.31
SNRPCP13-201ENST00000505417 CD2APQ9Y5K6 639 aa13.1□□□□□ -0.31
SNRPCP13-201ENST00000505417 CARMIL3Q8ND23 1372 aa13.09□□□□□ -0.31
SNRPCP13-201ENST00000505417 KIF3CO14782 793 aa13.09□□□□□ -0.31
SNRPCP13-201ENST00000505417 SERPINB2P05120 415 aa13.09□□□□□ -0.31
SNRPCP13-201ENST00000505417 C4AP0C0L4 1744 aa13.09□□□□□ -0.31
SNRPCP13-201ENST00000505417 PARP10Q53GL7 1025 aa13.09□□□□□ -0.31
SNRPCP13-201ENST00000505417 G2E3Q7L622 706 aa13.09□□□□□ -0.31
SNRPCP13-201ENST00000505417 ISCA1Q9BUE6 129 aa13.09□□□□□ -0.31
SNRPCP13-201ENST00000505417 METTL22Q9BUU2 404 aaPredicted RBP13.09□□□□□ -0.31
SNRPCP13-201ENST00000505417 ZBTB3Q9H5J0 574 aa13.09□□□□□ -0.31
SNRPCP13-201ENST00000505417 PTPRCP08575 1304 aa13.09□□□□□ -0.31
SNRPCP13-201ENST00000505417 IBTKQ9P2D0 1353 aaPredicted RBP13.08□□□□□ -0.31
SNRPCP13-201ENST00000505417 PI4KAP2A4QPH2 592 aa13.08□□□□□ -0.32
SNRPCP13-201ENST00000505417 TCERG1O14776 1098 aaKnown RBP13.08□□□□□ -0.32
SNRPCP13-201ENST00000505417 TPTE2Q6XPS3 522 aa13.08□□□□□ -0.32
SNRPCP13-201ENST00000505417 RIC3Q7Z5B4 369 aa13.08□□□□□ -0.32
SNRPCP13-201ENST00000505417 PI4KAP1Q8N8J0 262 aa13.08□□□□□ -0.32
SNRPCP13-201ENST00000505417 ARHGAP45Q92619 1136 aa13.08□□□□□ -0.32
SNRPCP13-201ENST00000505417 NIP7Q9Y221 180 aaKnown RBP eCLIP13.08□□□□□ -0.32
SNRPCP13-201ENST00000505417 RNF123Q5XPI4 1314 aa13.08□□□□□ -0.32
SNRPCP13-201ENST00000505417 MAP3K2Q9Y2U5 619 aa13.07□□□□□ -0.32
SNRPCP13-201ENST00000505417 SCN7AQ01118 1682 aa13.06□□□□□ -0.32
SNRPCP13-201ENST00000505417 APLP1P51693 650 aa13.06□□□□□ -0.32
SNRPCP13-201ENST00000505417 PRELPP51888 382 aa13.06□□□□□ -0.32
SNRPCP13-201ENST00000505417 TGFB2P61812 414 aa13.06□□□□□ -0.32
SNRPCP13-201ENST00000505417 FKBP5Q13451 457 aaPredicted RBP13.06□□□□□ -0.32
SNRPCP13-201ENST00000505417 BICDL1Q6ZP65 573 aa13.06□□□□□ -0.32
SNRPCP13-201ENST00000505417 NLRP10Q86W26 655 aa13.06□□□□□ -0.32
SNRPCP13-201ENST00000505417 CCDC191Q8NCU4 936 aa13.06□□□□□ -0.32
SNRPCP13-201ENST00000505417 NYXQ9GZU5 481 aa13.06□□□□□ -0.32
SNRPCP13-201ENST00000505417 SMC4Q9NTJ3 1288 aa13.06□□□□□ -0.32
SNRPCP13-201ENST00000505417 PDZRN3Q9UPQ7 1066 aa13.06□□□□□ -0.32
SNRPCP13-201ENST00000505417 KLRG2A4D1S0 409 aaPredicted RBP13.05□□□□□ -0.32
SNRPCP13-201ENST00000505417 NEXNQ0ZGT2 675 aa13.05□□□□□ -0.32
SNRPCP13-201ENST00000505417 SLC10A5Q5PT55 438 aa13.05□□□□□ -0.32
SNRPCP13-201ENST00000505417 PRR5LQ6MZQ0 368 aa13.05□□□□□ -0.32
SNRPCP13-201ENST00000505417 PPP1R42Q7Z4L9 355 aa13.05□□□□□ -0.32
SNRPCP13-201ENST00000505417 NBPF5PQ86XG9 351 aaPredicted RBP13.05□□□□□ -0.32
SNRPCP13-201ENST00000505417 DNAAF4Q8WXU2 420 aa13.05□□□□□ -0.32
SNRPCP13-201ENST00000505417 BRIP1Q9BX63 1249 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms