RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 ANKRD31Q8N7Z5 1873 aa26.36■■□□□ 1.81
UBE2D3-220ENST00000505307 CCDC24Q8N4L8 307 aa26.35■■□□□ 1.81
UBE2D3-220ENST00000505307 SRGNP10124 158 aa26.34■■□□□ 1.81
UBE2D3-220ENST00000505307 APLP1P51693 650 aa26.34■■□□□ 1.81
UBE2D3-220ENST00000505307 EIF4A1P60842 406 aaKnown RBP26.34■■□□□ 1.81
UBE2D3-220ENST00000505307 TPTE2Q6XPS3 522 aa26.34■■□□□ 1.81
UBE2D3-220ENST00000505307 MASTLQ96GX5 879 aa26.34■■□□□ 1.81
UBE2D3-220ENST00000505307 DLG5Q8TDM6 1919 aa26.33■■□□□ 1.81
UBE2D3-220ENST00000505307 NFKBIEO00221 500 aa26.33■■□□□ 1.81
UBE2D3-220ENST00000505307 C21orf2O43822 256 aa26.32■■□□□ 1.8
UBE2D3-220ENST00000505307 SOGA3Q5TF21 947 aa26.32■■□□□ 1.8
UBE2D3-220ENST00000505307 NIP7Q9Y221 180 aaKnown RBP eCLIP26.32■■□□□ 1.8
UBE2D3-220ENST00000505307 GLTPD2A6NH11 291 aa26.31■■□□□ 1.8
UBE2D3-220ENST00000505307 FSTL1Q12841 308 aa26.31■■□□□ 1.8
UBE2D3-220ENST00000505307 RRAGCQ9HB90 399 aa26.31■■□□□ 1.8
UBE2D3-220ENST00000505307 ERVV-1B6SEH8 477 aa26.3■■□□□ 1.8
UBE2D3-220ENST00000505307 PRELPP51888 382 aa26.3■■□□□ 1.8
UBE2D3-220ENST00000505307 LTBP3Q9NS15 1303 aa26.3■■□□□ 1.8
UBE2D3-220ENST00000505307 LAMB4A4D0S4 1761 aa26.3■■□□□ 1.8
UBE2D3-220ENST00000505307 KDM3BQ7LBC6 1761 aa26.3■■□□□ 1.8
UBE2D3-220ENST00000505307 KLRG2A4D1S0 409 aaPredicted RBP26.29■■□□□ 1.8
UBE2D3-220ENST00000505307 THUMPD2Q9BTF0 503 aaKnown RBP26.29■■□□□ 1.8
UBE2D3-220ENST00000505307 BABAM1Q9NWV8 329 aa26.29■■□□□ 1.8
UBE2D3-220ENST00000505307 TNRC6CQ9HCJ0 1690 aaKnown RBP26.28■■□□□ 1.8
UBE2D3-220ENST00000505307 LMOD3Q0VAK6 560 aa26.28■■□□□ 1.8
UBE2D3-220ENST00000505307 DDX10Q13206 875 aaKnown RBP26.28■■□□□ 1.8
UBE2D3-220ENST00000505307 PRPF40BQ6NWY9 871 aaKnown RBP26.28■■□□□ 1.8
UBE2D3-220ENST00000505307 MYBBP1AQ9BQG0 1328 aaKnown RBP26.28■■□□□ 1.8
UBE2D3-220ENST00000505307 COL11A2P13942 1736 aaPredicted RBP26.28■■□□□ 1.8
UBE2D3-220ENST00000505307 NPR1P16066 1061 aa26.27■■□□□ 1.8
UBE2D3-220ENST00000505307 RIPK4P57078 832 aa26.27■■□□□ 1.8
UBE2D3-220ENST00000505307 DPY19L2Q6NUT2 758 aa26.27■■□□□ 1.8
UBE2D3-220ENST00000505307 ERBB4Q15303 1308 aa26.27■■□□□ 1.8
UBE2D3-220ENST00000505307 VEGFAP15692 232 aaPredicted RBP26.26■■□□□ 1.79
UBE2D3-220ENST00000505307 HLFQ16534 295 aa26.26■■□□□ 1.79
UBE2D3-220ENST00000505307 KIF6Q6ZMV9 814 aa26.26■■□□□ 1.79
UBE2D3-220ENST00000505307 TAOK3Q9H2K8 898 aa26.26■■□□□ 1.79
UBE2D3-220ENST00000505307 ZNF219Q9P2Y4 722 aaPredicted RBP26.26■■□□□ 1.79
UBE2D3-220ENST00000505307 MAP3K15Q6ZN16 1313 aa26.25■■□□□ 1.79
UBE2D3-220ENST00000505307 GTF2E1P29083 439 aaPredicted RBP26.25■■□□□ 1.79
UBE2D3-220ENST00000505307 NYXQ9GZU5 481 aa26.25■■□□□ 1.79
UBE2D3-220ENST00000505307 TSPYL4Q9UJ04 414 aa26.25■■□□□ 1.79
UBE2D3-220ENST00000505307 RRP7AQ9Y3A4 280 aaKnown RBP26.25■■□□□ 1.79
UBE2D3-220ENST00000505307 ERFEQ4G0M1 354 aa26.24■■□□□ 1.79
UBE2D3-220ENST00000505307 TMPOP42166 694 aaKnown RBP26.23■■□□□ 1.79
UBE2D3-220ENST00000505307 NGEFQ8N5V2 710 aa26.23■■□□□ 1.79
UBE2D3-220ENST00000505307 SMC1BQ8NDV3 1235 aa26.23■■□□□ 1.79
UBE2D3-220ENST00000505307 FER1L6Q2WGJ9 1857 aa26.23■■□□□ 1.79
UBE2D3-220ENST00000505307 CCDC88AQ3V6T2 1871 aa26.21■■□□□ 1.79
UBE2D3-220ENST00000505307 SLX4Q8IY92 1834 aa26.21■■□□□ 1.79
UBE2D3-220ENST00000505307 ALDH1B1P30837 517 aa26.21■■□□□ 1.79
UBE2D3-220ENST00000505307 CCDC93Q567U6 631 aa26.21■■□□□ 1.79
UBE2D3-220ENST00000505307 C7orf43Q8WVR3 580 aa26.21■■□□□ 1.79
UBE2D3-220ENST00000505307 ARFGEF2Q9Y6D5 1785 aa26.2■■□□□ 1.79
UBE2D3-220ENST00000505307 FAM177BA6PVY3 158 aa26.2■■□□□ 1.78
UBE2D3-220ENST00000505307 MYL6BP14649 208 aa26.2■■□□□ 1.78
UBE2D3-220ENST00000505307 TTLL7Q6ZT98 887 aa26.2■■□□□ 1.78
UBE2D3-220ENST00000505307 TIAM2Q8IVF5 1701 aa26.19■■□□□ 1.78
UBE2D3-220ENST00000505307 IBTKQ9P2D0 1353 aaPredicted RBP26.19■■□□□ 1.78
UBE2D3-220ENST00000505307 WDR43Q15061 677 aaKnown RBP eCLIP26.18■■□□□ 1.78
UBE2D3-220ENST00000505307 DICER1Q9UPY3 1922 aaKnown RBP26.18■■□□□ 1.78
UBE2D3-220ENST00000505307 RTKN2Q8IZC4 609 aa26.17■■□□□ 1.78
UBE2D3-220ENST00000505307 DNAJC5GQ8N7S2 189 aa26.17■■□□□ 1.78
UBE2D3-220ENST00000505307 RUNDC1Q96C34 613 aa26.17■■□□□ 1.78
UBE2D3-220ENST00000505307 CRY2Q49AN0 593 aa26.16■■□□□ 1.78
UBE2D3-220ENST00000505307 GIGYF2Q6Y7W6 1299 aaKnown RBP26.16■■□□□ 1.78
UBE2D3-220ENST00000505307 ZBTB3Q9H5J0 574 aa26.16■■□□□ 1.78
UBE2D3-220ENST00000505307 ZNF34Q8IZ26 560 aa26.15■■□□□ 1.78
UBE2D3-220ENST00000505307 RIC1Q4ADV7 1423 aa26.14■■□□□ 1.78
UBE2D3-220ENST00000505307 NUP98P52948 1817 aa26.14■■□□□ 1.78
UBE2D3-220ENST00000505307 EIF2S2P20042 333 aaKnown RBP26.14■■□□□ 1.78
UBE2D3-220ENST00000505307 FKBP4Q02790 459 aaKnown RBP eCLIP26.14■■□□□ 1.782e-9■■□□□ 12.2
UBE2D3-220ENST00000505307 WDR90Q96KV7 1748 aa26.14■■□□□ 1.77
UBE2D3-220ENST00000505307 HTRA3P83110 453 aa26.13■■□□□ 1.77
UBE2D3-220ENST00000505307 PARP10Q53GL7 1025 aa26.13■■□□□ 1.77
UBE2D3-220ENST00000505307 NUTM1Q86Y26 1132 aa26.13■■□□□ 1.77
UBE2D3-220ENST00000505307 CACNA1SQ13698 1873 aa26.13■■□□□ 1.77
UBE2D3-220ENST00000505307 POTECB2RU33 542 aa26.12■■□□□ 1.77
UBE2D3-220ENST00000505307 GPTP24298 496 aa26.12■■□□□ 1.77
UBE2D3-220ENST00000505307 PDIA6Q15084 440 aa26.12■■□□□ 1.77
UBE2D3-220ENST00000505307 CC2D2BQ6DHV5 1058 aa26.12■■□□□ 1.77
UBE2D3-220ENST00000505307 LRP10Q7Z4F1 713 aa26.12■■□□□ 1.77
UBE2D3-220ENST00000505307 PPP1R42Q7Z4L9 355 aa26.12■■□□□ 1.77
UBE2D3-220ENST00000505307 CCDC146Q8IYE0 955 aa26.12■■□□□ 1.77
UBE2D3-220ENST00000505307 UBN2Q6ZU65 1347 aa26.12■■□□□ 1.77
UBE2D3-220ENST00000505307 CHL1O00533 1208 aa26.11■■□□□ 1.77
UBE2D3-220ENST00000505307 NEUROD2Q15784 382 aa26.11■■□□□ 1.77
UBE2D3-220ENST00000505307 SUSD4Q5VX71 490 aa26.11■■□□□ 1.77
UBE2D3-220ENST00000505307 ABCC12Q96J65 1359 aa26.1■■□□□ 1.77
UBE2D3-220ENST00000505307 HOXA10P31260 410 aaPredicted RBP26.1■■□□□ 1.77
UBE2D3-220ENST00000505307 GRIPAP1Q4V328 841 aa26.1■■□□□ 1.77
UBE2D3-220ENST00000505307 RPGRQ92834 1020 aaKnown RBP26.1■■□□□ 1.77
UBE2D3-220ENST00000505307 PRKRIP1Q9H875 184 aaPredicted RBP26.09■■□□□ 1.77
UBE2D3-220ENST00000505307 ADAMTS8Q9UP79 889 aa26.09■■□□□ 1.77
UBE2D3-220ENST00000505307 DDNO94850 711 aaPredicted RBP26.08■■□□□ 1.77
UBE2D3-220ENST00000505307 NTSR2O95665 410 aa26.08■■□□□ 1.77
UBE2D3-220ENST00000505307 HSP90AB3PQ58FF7 597 aa26.08■■□□□ 1.77
UBE2D3-220ENST00000505307 KLRG1Q96E93 195 aa26.08■■□□□ 1.77
UBE2D3-220ENST00000505307 TRIM35Q9UPQ4 493 aa26.08■■□□□ 1.77
UBE2D3-220ENST00000505307 IQCA1LA6NCM1 817 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms