RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 PRPF38BQ5VTL8 546 aaKnown RBP8.87□□□□□ -0.99
CDH9-202ENST00000505020 TMC4Q7Z404 712 aa8.87□□□□□ -0.99
CDH9-202ENST00000505020 CKAP2LQ8IYA6 745 aa8.87□□□□□ -0.99
CDH9-202ENST00000505020 MYRIPQ8NFW9 859 aa8.87□□□□□ -0.99
CDH9-202ENST00000505020 ALDH8A1Q9H2A2 487 aaPredicted RBP8.87□□□□□ -0.99
CDH9-202ENST00000505020 RETREG1Q9H6L5 497 aa8.87□□□□□ -0.99
CDH9-202ENST00000505020 MRPS23Q9Y3D9 190 aaKnown RBP8.87□□□□□ -0.99
CDH9-202ENST00000505020 DNMT3AQ9Y6K1 912 aaPredicted RBP8.87□□□□□ -0.99
CDH9-202ENST00000505020 LDHBP07195 334 aaKnown RBP8.86□□□□□ -0.99
CDH9-202ENST00000505020 GOLGA2Q08379 1002 aa8.86□□□□□ -0.99
CDH9-202ENST00000505020 CCDC92Q53HC0 331 aaPredicted RBP8.86□□□□□ -0.99
CDH9-202ENST00000505020 BRDTQ58F21 947 aaPredicted RBP8.86□□□□□ -0.99
CDH9-202ENST00000505020 VPS37DQ86XT2 251 aa8.86□□□□□ -0.99
CDH9-202ENST00000505020 NFATC2IPQ8NCF5 419 aa8.86□□□□□ -0.99
CDH9-202ENST00000505020 ZBTB3Q9H5J0 574 aa8.86□□□□□ -0.99
CDH9-202ENST00000505020 EN1Q05925 392 aaPredicted RBP8.85□□□□□ -0.99
CDH9-202ENST00000505020 CDC37Q16543 378 aaPredicted RBP8.85□□□□□ -0.99
CDH9-202ENST00000505020 RPAINQ86UA6 219 aa8.85□□□□□ -0.99
CDH9-202ENST00000505020 SUGP1Q8IWZ8 645 aaKnown RBP8.85□□□□□ -0.99
CDH9-202ENST00000505020 FAM174AQ8TBP5 190 aa8.85□□□□□ -0.99
CDH9-202ENST00000505020 ERP27Q96DN0 273 aa8.85□□□□□ -0.99
CDH9-202ENST00000505020 SRPK1Q96SB4 655 aaKnown RBP8.85□□□□□ -0.99
CDH9-202ENST00000505020 ASAP1Q9ULH1 1129 aa8.85□□□□□ -0.99
CDH9-202ENST00000505020 EVI5O60447 810 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 HCLS1P14317 486 aaPredicted RBP8.84□□□□□ -0.99
CDH9-202ENST00000505020 CTHP32929 405 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 MTA1Q13330 715 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 LRRC41Q15345 812 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 KRT77Q7Z794 578 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 ANKRD23Q86SG2 305 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 RBM33Q96EV2 1170 aaKnown RBP8.84□□□□□ -0.99
CDH9-202ENST00000505020 KANSL2Q9H9L4 492 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 PTPRHQ9HD43 1115 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 ABCF2Q9UG63 623 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 SEPT3Q9UH03 358 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 POLG2Q9UHN1 485 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 DDX41Q9UJV9 622 aaKnown RBP8.84□□□□□ -0.99
CDH9-202ENST00000505020 SLC45A1Q9Y2W3 748 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 EMILIN1Q9Y6C2 1016 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 SLC26A4O43511 780 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 RBP3P10745 1247 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 MASP1P48740 699 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 TDO2P48775 406 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 CDKN1CP49918 316 aaPredicted RBP8.84□□□□□ -0.99
CDH9-202ENST00000505020 DAB2P98082 770 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 FKBP4Q02790 459 aaKnown RBP eCLIP8.84□□□□□ -0.99
CDH9-202ENST00000505020 FAM160A1Q05DH4 1040 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 PSMD2Q13200 908 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 GRAMD1BQ3KR37 738 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 IFNL3Q8IZI9 196 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 MPNDQ8N594 471 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 SEZ6LQ9BYH1 1024 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 ZNF700Q9H0M5 742 aa8.84□□□□□ -0.99
CDH9-202ENST00000505020 SEC13P55735 322 aa8.83□□□□□ -1
CDH9-202ENST00000505020 CHMP4BP1P59074 171 aa8.83□□□□□ -1
CDH9-202ENST00000505020 ACBD5Q5T8D3 534 aaPredicted RBP8.83□□□□□ -1
CDH9-202ENST00000505020 PNMA1Q8ND90 353 aa8.83□□□□□ -1
CDH9-202ENST00000505020 ANP32BQ92688 251 aaKnown RBP8.83□□□□□ -1
CDH9-202ENST00000505020 CXXC1Q9P0U4 656 aaPredicted RBP8.83□□□□□ -1
CDH9-202ENST00000505020 HDAC9Q9UKV0 1011 aa8.83□□□□□ -1
CDH9-202ENST00000505020 MYL3P08590 195 aa8.82□□□□□ -1
CDH9-202ENST00000505020 MAPK8P45983 427 aa8.82□□□□□ -1
CDH9-202ENST00000505020 FMR1Q06787 632 aaKnown RBP eCLIP8.82□□□□□ -1
CDH9-202ENST00000505020 NCOA4Q13772 614 aa8.82□□□□□ -1
CDH9-202ENST00000505020 NBPF6Q5VWK0 638 aa8.82□□□□□ -1
CDH9-202ENST00000505020 PADI6Q6TGC4 694 aa8.82□□□□□ -1
CDH9-202ENST00000505020 C14orf80Q86SX3 495 aa8.82□□□□□ -1
CDH9-202ENST00000505020 ZNF654Q8IZM8 581 aa8.82□□□□□ -1
CDH9-202ENST00000505020 E2F7Q96AV8 911 aa8.82□□□□□ -1
CDH9-202ENST00000505020 NBPF4Q96M43 638 aa8.82□□□□□ -1
CDH9-202ENST00000505020 AGBL1Q96MI9 1066 aa8.82□□□□□ -1
CDH9-202ENST00000505020 CARD10Q9BWT7 1032 aa8.82□□□□□ -1
CDH9-202ENST00000505020 CLIC5Q9NZA1 410 aa8.82□□□□□ -1
CDH9-202ENST00000505020 PRPF40AO75400 957 aaKnown RBP8.82□□□□□ -1
CDH9-202ENST00000505020 CASP2P42575 452 aa8.82□□□□□ -1
CDH9-202ENST00000505020 NR6A1Q15406 480 aa8.82□□□□□ -1
CDH9-202ENST00000505020 OCLNQ16625 522 aa8.82□□□□□ -1
CDH9-202ENST00000505020 ARSHQ5FYA8 562 aa8.82□□□□□ -1
CDH9-202ENST00000505020 HDGFL2Q7Z4V5 671 aaPredicted RBP8.82□□□□□ -1
CDH9-202ENST00000505020 JAMLQ86YT9 394 aa8.82□□□□□ -1
CDH9-202ENST00000505020 HSCBQ8IWL3 235 aa8.82□□□□□ -1
CDH9-202ENST00000505020 ZNF594Q96JF6 807 aaPredicted RBP8.82□□□□□ -1
CDH9-202ENST00000505020 ZNF69Q9UC07 566 aa8.82□□□□□ -1
CDH9-202ENST00000505020 PPP2R3BQ9Y5P8 575 aa8.82□□□□□ -1
CDH9-202ENST00000505020 ATP5J2-PTCD1G3V325 749 aa8.81□□□□□ -1
CDH9-202ENST00000505020 ALDH1L1O75891 902 aa8.81□□□□□ -1
CDH9-202ENST00000505020 SRGNP10124 158 aa8.81□□□□□ -1
CDH9-202ENST00000505020 CCDC70Q6NSX1 233 aa8.81□□□□□ -1
CDH9-202ENST00000505020 PDXDC1Q6P996 788 aa8.81□□□□□ -1
CDH9-202ENST00000505020 CNTN3Q9P232 1028 aa8.81□□□□□ -1
CDH9-202ENST00000505020 C2orf72A6NCS6 295 aa8.8□□□□□ -1
CDH9-202ENST00000505020 TREHO43280 583 aa8.8□□□□□ -1
CDH9-202ENST00000505020 ATF3P18847 181 aa8.8□□□□□ -1
CDH9-202ENST00000505020 ATF4P18848 351 aaPredicted RBP8.8□□□□□ -1
CDH9-202ENST00000505020 ATICP31939 592 aa8.8□□□□□ -1
CDH9-202ENST00000505020 KIAA0907Q7Z7F0 614 aaPredicted RBP8.8□□□□□ -1
CDH9-202ENST00000505020 SH3TC2Q8TF17 1288 aa8.8□□□□□ -1
CDH9-202ENST00000505020 RABGAP1Q9Y3P9 1069 aa8.8□□□□□ -1
CDH9-202ENST00000505020 PRSS47A8MTI9 375 aa8.8□□□□□ -1
CDH9-202ENST00000505020 IGHDP01880 384 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms