RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 ZNF232Q9UNY5 417 aa10.21□□□□□ -0.77
DEPDC1B-203ENST00000505017 PHF20L1A8MW92 1017 aa10.2□□□□□ -0.78
DEPDC1B-203ENST00000505017 HIRAP54198 1017 aaPredicted RBP10.2□□□□□ -0.78
DEPDC1B-203ENST00000505017 BICDL1Q6ZP65 573 aa10.2□□□□□ -0.78
DEPDC1B-203ENST00000505017 PPP1R12CQ9BZL4 782 aa10.2□□□□□ -0.78
DEPDC1B-203ENST00000505017 CRTC2Q53ET0 693 aaPredicted RBP10.19□□□□□ -0.78
DEPDC1B-203ENST00000505017 MDFIQ99750 246 aa10.19□□□□□ -0.78
DEPDC1B-203ENST00000505017 SUV39H2Q9H5I1 410 aa10.19□□□□□ -0.78
DEPDC1B-203ENST00000505017 HCN4Q9Y3Q4 1203 aa10.19□□□□□ -0.78
DEPDC1B-203ENST00000505017 RASA1P20936 1047 aa10.18□□□□□ -0.78
DEPDC1B-203ENST00000505017 PCBP4P57723 403 aaKnown RBP10.18□□□□□ -0.78
DEPDC1B-203ENST00000505017 PSMA6P60900 246 aaKnown RBP10.18□□□□□ -0.78
DEPDC1B-203ENST00000505017 SUZ12Q15022 739 aaKnown RBP10.18□□□□□ -0.78
DEPDC1B-203ENST00000505017 PODNQ7Z5L7 613 aa10.18□□□□□ -0.78
DEPDC1B-203ENST00000505017 ZNF280CQ8ND82 737 aa10.18□□□□□ -0.78
DEPDC1B-203ENST00000505017 GAS2L2Q8NHY3 880 aa10.18□□□□□ -0.78
DEPDC1B-203ENST00000505017 KRBA1A5PL33 1030 aa10.17□□□□□ -0.78
DEPDC1B-203ENST00000505017 DGKGP49619 791 aa10.17□□□□□ -0.78
DEPDC1B-203ENST00000505017 SFSWAPQ12872 951 aaKnown RBP10.17□□□□□ -0.78
DEPDC1B-203ENST00000505017 ZNF468Q5VIY5 522 aaPredicted RBP10.17□□□□□ -0.78
DEPDC1B-203ENST00000505017 HSH2DQ96JZ2 352 aa10.17□□□□□ -0.78
DEPDC1B-203ENST00000505017 MARK1Q9P0L2 795 aa10.17□□□□□ -0.78
DEPDC1B-203ENST00000505017 LGR5O75473 907 aa10.16□□□□□ -0.78
DEPDC1B-203ENST00000505017 ADH6P28332 368 aa10.16□□□□□ -0.78
DEPDC1B-203ENST00000505017 PTK7Q13308 1070 aa10.16□□□□□ -0.78
DEPDC1B-203ENST00000505017 CALR3Q96L12 384 aaKnown RBP10.16□□□□□ -0.78
DEPDC1B-203ENST00000505017 PHACTR1Q9C0D0 580 aa10.16□□□□□ -0.78
DEPDC1B-203ENST00000505017 RRAGCQ9HB90 399 aa10.16□□□□□ -0.78
DEPDC1B-203ENST00000505017 GJA3Q9Y6H8 435 aa10.16□□□□□ -0.78
DEPDC1B-203ENST00000505017 LOC100996750A0A140TA64 210 aa10.15□□□□□ -0.78
DEPDC1B-203ENST00000505017 PROCP04070 461 aa10.15□□□□□ -0.78
DEPDC1B-203ENST00000505017 C1orf53Q5VUE5 145 aa10.15□□□□□ -0.78
DEPDC1B-203ENST00000505017 SLC30A3Q99726 388 aa10.15□□□□□ -0.78
DEPDC1B-203ENST00000505017 C2orf49Q9BVC5 232 aaPredicted RBP10.15□□□□□ -0.78
DEPDC1B-203ENST00000505017 KRTAP4-6Q9BYQ5 205 aa10.15□□□□□ -0.78
DEPDC1B-203ENST00000505017 AVENQ9NQS1 362 aaPredicted RBP10.15□□□□□ -0.78
DEPDC1B-203ENST00000505017 MKL2Q9ULH7 1088 aa10.15□□□□□ -0.78
DEPDC1B-203ENST00000505017 LAMC2Q13753 1193 aa10.14□□□□□ -0.79
DEPDC1B-203ENST00000505017 CHSY3Q70JA7 882 aa10.14□□□□□ -0.79
DEPDC1B-203ENST00000505017 RHPN1Q8TCX5 695 aa10.14□□□□□ -0.79
DEPDC1B-203ENST00000505017 GPC6Q9Y625 555 aaPredicted RBP10.14□□□□□ -0.79
DEPDC1B-203ENST00000505017 ATAD2Q6PL18 1390 aa10.14□□□□□ -0.79
DEPDC1B-203ENST00000505017 IGHA1P01876 353 aa10.13□□□□□ -0.79
DEPDC1B-203ENST00000505017 AMPD1P23109 780 aa10.13□□□□□ -0.79
DEPDC1B-203ENST00000505017 SPOCK3Q9BQ16 436 aa10.13□□□□□ -0.79
DEPDC1B-203ENST00000505017 PPP1R12BO60237 982 aaPredicted RBP10.12□□□□□ -0.79
DEPDC1B-203ENST00000505017 SEC13P55735 322 aa10.12□□□□□ -0.79
DEPDC1B-203ENST00000505017 DPYDQ12882 1025 aa10.12□□□□□ -0.79
DEPDC1B-203ENST00000505017 CFAP70Q5T0N1 1121 aa10.12□□□□□ -0.79
DEPDC1B-203ENST00000505017 SYT9Q86SS6 491 aa10.12□□□□□ -0.79
DEPDC1B-203ENST00000505017 SCG3Q8WXD2 468 aaKnown RBP10.12□□□□□ -0.79
DEPDC1B-203ENST00000505017 ARXQ96QS3 562 aa10.12□□□□□ -0.79
DEPDC1B-203ENST00000505017 LMOD1P29536 600 aaPredicted RBP10.11□□□□□ -0.79
DEPDC1B-203ENST00000505017 ALDH16A1Q8IZ83 802 aa10.11□□□□□ -0.79
DEPDC1B-203ENST00000505017 STAG2Q8N3U4 1231 aa10.11□□□□□ -0.79
DEPDC1B-203ENST00000505017 SUSD3Q96L08 255 aa10.11□□□□□ -0.79
DEPDC1B-203ENST00000505017 PRR12Q9ULL5 1215 aa10.11□□□□□ -0.79
DEPDC1B-203ENST00000505017 TYRO3Q06418 890 aa10.1□□□□□ -0.79
DEPDC1B-203ENST00000505017 ZNF777Q9ULD5 760 aaPredicted RBP10.1□□□□□ -0.79
DEPDC1B-203ENST00000505017 USP17L15C9J2P7 530 aa10.09□□□□□ -0.79
DEPDC1B-203ENST00000505017 USP17L10C9JJH3 530 aa10.09□□□□□ -0.79
DEPDC1B-203ENST00000505017 USP17L13C9JLJ4 530 aa10.09□□□□□ -0.79
DEPDC1B-203ENST00000505017 USP17L12C9JPN9 530 aa10.09□□□□□ -0.79
DEPDC1B-203ENST00000505017 USP17L11C9JVI0 530 aa10.09□□□□□ -0.79
DEPDC1B-203ENST00000505017 USP17L21D6R901 530 aa10.09□□□□□ -0.79
DEPDC1B-203ENST00000505017 USP17L18D6R9N7 530 aa10.09□□□□□ -0.79
DEPDC1B-203ENST00000505017 USP17L22D6RA61 530 aa10.09□□□□□ -0.79
DEPDC1B-203ENST00000505017 USP17L17D6RBQ6 530 aa10.09□□□□□ -0.79
DEPDC1B-203ENST00000505017 USP17L19D6RCP7 530 aa10.09□□□□□ -0.79
DEPDC1B-203ENST00000505017 USP17L20D6RJB6 530 aa10.09□□□□□ -0.79
DEPDC1B-203ENST00000505017 USP17L24Q0WX57 530 aa10.09□□□□□ -0.79
DEPDC1B-203ENST00000505017 RAB44Q7Z6P3 723 aaPredicted RBP10.09□□□□□ -0.79
DEPDC1B-203ENST00000505017 TRIM11Q96F44 468 aa10.09□□□□□ -0.79
DEPDC1B-203ENST00000505017 BCS1LQ9Y276 419 aa10.09□□□□□ -0.79
DEPDC1B-203ENST00000505017 FAM196BA6NMK8 535 aa10.08□□□□□ -0.8
DEPDC1B-203ENST00000505017 GNB5O14775 395 aa10.08□□□□□ -0.8
DEPDC1B-203ENST00000505017 KCNQ4P56696 695 aa10.08□□□□□ -0.8
DEPDC1B-203ENST00000505017 ANKMY2Q8IV38 441 aa10.08□□□□□ -0.8
DEPDC1B-203ENST00000505017 STARD13Q9Y3M8 1113 aa10.08□□□□□ -0.8
DEPDC1B-203ENST00000505017 MSTNO14793 375 aa10.07□□□□□ -0.8
DEPDC1B-203ENST00000505017 COL9A3Q14050 684 aaPredicted RBP10.07□□□□□ -0.8
DEPDC1B-203ENST00000505017 LARP1Q6PKG0 1096 aaKnown RBP10.07□□□□□ -0.8
DEPDC1B-203ENST00000505017 CHMP7Q8WUX9 453 aaPredicted RBP10.07□□□□□ -0.8
DEPDC1B-203ENST00000505017 BRD7Q9NPI1 651 aa10.07□□□□□ -0.8
DEPDC1B-203ENST00000505017 ELOA3CA0A087WX78 387 aaPredicted RBP10.06□□□□□ -0.8
DEPDC1B-203ENST00000505017 ELOA3DA6NLF2 546 aaPredicted RBP10.06□□□□□ -0.8
DEPDC1B-203ENST00000505017 GRNP28799 593 aaKnown RBP10.06□□□□□ -0.8
DEPDC1B-203ENST00000505017 SPEM2Q0P670 501 aa10.06□□□□□ -0.8
DEPDC1B-203ENST00000505017 ELOA3BQ3SY89 546 aa10.06□□□□□ -0.8
DEPDC1B-203ENST00000505017 ELOA3Q8NG57 546 aa10.06□□□□□ -0.8
DEPDC1B-203ENST00000505017 CEP63Q96MT8 703 aa10.06□□□□□ -0.8
DEPDC1B-203ENST00000505017 VRTNQ9H8Y1 702 aa10.06□□□□□ -0.8
DEPDC1B-203ENST00000505017 NEUROD4Q9HD90 331 aa10.06□□□□□ -0.8
DEPDC1B-203ENST00000505017 DMGDHQ9UI17 866 aaKnown RBP10.06□□□□□ -0.8
DEPDC1B-203ENST00000505017 ADARB2-AS1A8MUL3 147 aa10.05□□□□□ -0.8
DEPDC1B-203ENST00000505017 SIN3BO75182 1162 aa10.05□□□□□ -0.8
DEPDC1B-203ENST00000505017 NGLY1Q96IV0 654 aa10.05□□□□□ -0.8
DEPDC1B-203ENST00000505017 HINFPQ9BQA5 517 aa10.05□□□□□ -0.8
DEPDC1B-203ENST00000505017 BTLAQ7Z6A9 289 aa10.04□□□□□ -0.8
DEPDC1B-203ENST00000505017 TNFRSF25Q93038 417 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms