RNA–Protein interactions for RNA: ENST00000504835.1

CDH6-202, Transcript of cadherin 6, humanhuman

TSL 5

Gene CDH6, Length 1,568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-202ENST00000504835 SLC4A9Q96Q91 983 aa11.78□□□□□ -0.52
CDH6-202ENST00000504835 ATG3Q9NT62 314 aa11.78□□□□□ -0.52
CDH6-202ENST00000504835 PPP1R37O75864 691 aa11.77□□□□□ -0.53
CDH6-202ENST00000504835 PLPP6Q8IY26 295 aa11.77□□□□□ -0.53
CDH6-202ENST00000504835 IFNL2Q8IZJ0 200 aa11.77□□□□□ -0.53
CDH6-202ENST00000504835 TMOD3Q9NYL9 352 aa11.77□□□□□ -0.53
CDH6-202ENST00000504835 ADAMTS7Q9UKP4 1686 aa11.76□□□□□ -0.53
CDH6-202ENST00000504835 PXDNLA1KZ92 1463 aa11.76□□□□□ -0.53
CDH6-202ENST00000504835 GNPATO15228 680 aa11.76□□□□□ -0.53
CDH6-202ENST00000504835 HMGB2P26583 209 aaKnown RBP11.76□□□□□ -0.53
CDH6-202ENST00000504835 KDM6AO15550 1401 aaPredicted RBP11.76□□□□□ -0.53
CDH6-202ENST00000504835 ATP6V1AP38606 617 aa11.75□□□□□ -0.53
CDH6-202ENST00000504835 TRIM26Q12899 539 aaPredicted RBP11.75□□□□□ -0.53
CDH6-202ENST00000504835 PLEKHG2Q9H7P9 1386 aa11.75□□□□□ -0.53
CDH6-202ENST00000504835 SBF1O95248 1867 aa11.75□□□□□ -0.53
CDH6-202ENST00000504835 RGS20O76081 388 aa11.75□□□□□ -0.53
CDH6-202ENST00000504835 PRKCSHP14314 528 aaPredicted RBP11.75□□□□□ -0.53
CDH6-202ENST00000504835 ZNF526Q8TF50 670 aaPredicted RBP11.75□□□□□ -0.53
CDH6-202ENST00000504835 GPHNQ9NQX3 736 aaPredicted RBP11.75□□□□□ -0.53
CDH6-202ENST00000504835 C10orf71Q711Q0 1435 aa11.74□□□□□ -0.53
CDH6-202ENST00000504835 RGL2O15211 777 aa11.74□□□□□ -0.53
CDH6-202ENST00000504835 TNNT2P45379 298 aaPredicted RBP11.74□□□□□ -0.53
CDH6-202ENST00000504835 KCNK17Q96T54 332 aa11.74□□□□□ -0.53
CDH6-202ENST00000504835 GPBP1L1Q9HC44 474 aaPredicted RBP11.74□□□□□ -0.53
CDH6-202ENST00000504835 MMP10P09238 476 aa11.73□□□□□ -0.53
CDH6-202ENST00000504835 AFDNP55196 1824 aaKnown RBP11.73□□□□□ -0.53
CDH6-202ENST00000504835 POLR3GLQ9BT43 218 aa11.71□□□□□ -0.53
CDH6-202ENST00000504835 TIMELESSQ9UNS1 1208 aa11.71□□□□□ -0.53
CDH6-202ENST00000504835 CNTNAP4Q9C0A0 1308 aa11.71□□□□□ -0.54
CDH6-202ENST00000504835 ERVV-2B6SEH9 535 aa11.71□□□□□ -0.54
CDH6-202ENST00000504835 AEBP1Q8IUX7 1158 aa11.71□□□□□ -0.54
CDH6-202ENST00000504835 ARHGEF1Q92888 912 aaKnown RBP11.71□□□□□ -0.54
CDH6-202ENST00000504835 CCDC88AQ3V6T2 1871 aa11.7□□□□□ -0.54
CDH6-202ENST00000504835 GYS1P13807 737 aa11.7□□□□□ -0.54
CDH6-202ENST00000504835 HSPA6P17066 643 aa11.7□□□□□ -0.54
CDH6-202ENST00000504835 PTPN5P54829 565 aa11.7□□□□□ -0.54
CDH6-202ENST00000504835 RC3H1Q5TC82 1133 aaKnown RBP11.7□□□□□ -0.54
CDH6-202ENST00000504835 DCAF5Q96JK2 942 aa11.7□□□□□ -0.54
CDH6-202ENST00000504835 PANK3Q9H999 370 aa11.7□□□□□ -0.54
CDH6-202ENST00000504835 RTCBQ9Y3I0 505 aaKnown RBP11.7□□□□□ -0.54
CDH6-202ENST00000504835 DLEC1Q9Y238 1755 aa11.69□□□□□ -0.54
CDH6-202ENST00000504835 A0A0G2JLW4 131 aa11.69□□□□□ -0.54
CDH6-202ENST00000504835 TRAPPC3LQ5T215 181 aa11.69□□□□□ -0.54
CDH6-202ENST00000504835 ZNF530Q6P9A1 599 aaPredicted RBP11.69□□□□□ -0.54
CDH6-202ENST00000504835 VPS9D1Q9Y2B5 631 aa11.69□□□□□ -0.54
CDH6-202ENST00000504835 UBR2Q8IWV8 1755 aa11.68□□□□□ -0.54
CDH6-202ENST00000504835 RPS6KA4O75676 772 aa11.68□□□□□ -0.54
CDH6-202ENST00000504835 HSPA5P11021 654 aaKnown RBP11.68□□□□□ -0.54
CDH6-202ENST00000504835 TGFB2P61812 414 aa11.68□□□□□ -0.54
CDH6-202ENST00000504835 DSG2Q14126 1118 aa11.68□□□□□ -0.54
CDH6-202ENST00000504835 PLEKHO1Q53GL0 409 aaPredicted RBP11.68□□□□□ -0.54
CDH6-202ENST00000504835 IFFO2Q5TF58 517 aa11.68□□□□□ -0.54
CDH6-202ENST00000504835 WDR90Q96KV7 1748 aa11.68□□□□□ -0.54
CDH6-202ENST00000504835 NRXN2Q9P2S2 1712 aa11.68□□□□□ -0.54
CDH6-202ENST00000504835 HSP90AB1P08238 724 aaKnown RBP11.67□□□□□ -0.54
CDH6-202ENST00000504835 DPEP1P16444 411 aa11.67□□□□□ -0.54
CDH6-202ENST00000504835 KCNA3P22001 575 aa11.67□□□□□ -0.54
CDH6-202ENST00000504835 NLGN1Q8N2Q7 840 aa11.67□□□□□ -0.54
CDH6-202ENST00000504835 BCS1LQ9Y276 419 aa11.67□□□□□ -0.54
CDH6-202ENST00000504835 CLSPNQ9HAW4 1339 aa11.66□□□□□ -0.54
CDH6-202ENST00000504835 MRC1P22897 1456 aa11.66□□□□□ -0.54
CDH6-202ENST00000504835 CABP4P57796 275 aa11.66□□□□□ -0.54
CDH6-202ENST00000504835 AMOTQ4VCS5 1084 aa11.66□□□□□ -0.54
CDH6-202ENST00000504835 SLC4A5Q9BY07 1137 aa11.66□□□□□ -0.54
CDH6-202ENST00000504835 SRP68Q9UHB9 627 aaKnown RBP11.66□□□□□ -0.54
CDH6-202ENST00000504835 SIPA1L3O60292 1781 aaPredicted RBP11.65□□□□□ -0.54
CDH6-202ENST00000504835 PTCD1O75127 700 aaKnown RBP11.65□□□□□ -0.54
CDH6-202ENST00000504835 RFC4P35249 363 aa11.65□□□□□ -0.54
CDH6-202ENST00000504835 CRKLP46109 303 aaKnown RBP11.65□□□□□ -0.54
CDH6-202ENST00000504835 MTHFSP49914 203 aa11.65□□□□□ -0.54
CDH6-202ENST00000504835 EIF4G2P78344 907 aaKnown RBP eCLIP11.65□□□□□ -0.54
CDH6-202ENST00000504835 DDR1Q08345 913 aa11.65□□□□□ -0.54
CDH6-202ENST00000504835 NFATC2IPQ8NCF5 419 aa11.65□□□□□ -0.54
CDH6-202ENST00000504835 CCDC87Q9NVE4 849 aa11.65□□□□□ -0.54
CDH6-202ENST00000504835 KCPQ6ZWJ8 1503 aa11.65□□□□□ -0.54
CDH6-202ENST00000504835 TNRC6CQ9HCJ0 1690 aaKnown RBP11.65□□□□□ -0.55
CDH6-202ENST00000504835 ANKRD31Q8N7Z5 1873 aa11.64□□□□□ -0.55
CDH6-202ENST00000504835 IL13P35225 146 aa11.64□□□□□ -0.55
CDH6-202ENST00000504835 SULT6B1Q6IMI4 303 aa11.64□□□□□ -0.55
CDH6-202ENST00000504835 PCGF6Q9BYE7 350 aa11.64□□□□□ -0.55
CDH6-202ENST00000504835 USP42Q9H9J4 1324 aaKnown RBP11.64□□□□□ -0.55
CDH6-202ENST00000504835 GOLGA8CPA6NN73 597 aa11.63□□□□□ -0.55
CDH6-202ENST00000504835 FCHSD2O94868 740 aa11.63□□□□□ -0.55
CDH6-202ENST00000504835 INTS5Q6P9B9 1019 aaKnown RBP11.63□□□□□ -0.55
CDH6-202ENST00000504835 ARHGAP27Q6ZUM4 889 aa11.63□□□□□ -0.55
CDH6-202ENST00000504835 MORC1Q86VD1 984 aa11.63□□□□□ -0.55
CDH6-202ENST00000504835 IRX2Q9BZI1 471 aaPredicted RBP11.63□□□□□ -0.55
CDH6-202ENST00000504835 NMRK2Q9NPI5 230 aa11.63□□□□□ -0.55
CDH6-202ENST00000504835 PARP3Q9Y6F1 533 aa11.63□□□□□ -0.55
CDH6-202ENST00000504835 TIAM2Q8IVF5 1701 aa11.63□□□□□ -0.55
CDH6-202ENST00000504835 C1orf141Q5JVX7 400 aa11.62□□□□□ -0.55
CDH6-202ENST00000504835 ZNF454Q8N9F8 522 aa11.62□□□□□ -0.55
CDH6-202ENST00000504835 BCL2L12Q9HB09 334 aa11.62□□□□□ -0.55
CDH6-202ENST00000504835 CACNA1SQ13698 1873 aa11.62□□□□□ -0.55
CDH6-202ENST00000504835 LGR6Q9HBX8 967 aa11.62□□□□□ -0.55
CDH6-202ENST00000504835 PCNTO95613 3336 aa11.62□□□□□ -0.55
CDH6-202ENST00000504835 DICER1Q9UPY3 1922 aaKnown RBP11.61□□□□□ -0.55
CDH6-202ENST00000504835 POLRMTO00411 1230 aaKnown RBP11.61□□□□□ -0.55
CDH6-202ENST00000504835 TM4SF1P30408 202 aa11.61□□□□□ -0.55
CDH6-202ENST00000504835 PLCB2Q00722 1185 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms