RNA–Protein interactions for RNA: ENST00000504824.5

SDHA-205, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-205ENST00000504824 CNBD1Q8NA66 436 aa22.71■■□□□ 1.23
SDHA-205ENST00000504824 BRIP1Q9BX63 1249 aa22.71■■□□□ 1.23
SDHA-205ENST00000504824 RRP7AQ9Y3A4 280 aaKnown RBP22.71■■□□□ 1.23
SDHA-205ENST00000504824 TNRC6CQ9HCJ0 1690 aaKnown RBP22.7■■□□□ 1.22
SDHA-205ENST00000504824 ZNF316A6NFI3 1004 aaPredicted RBP22.7■■□□□ 1.22
SDHA-205ENST00000504824 NEUROD2Q15784 382 aa22.7■■□□□ 1.22
SDHA-205ENST00000504824 PRR5LQ6MZQ0 368 aa22.7■■□□□ 1.22
SDHA-205ENST00000504824 ZNF652Q9Y2D9 606 aa22.7■■□□□ 1.22
SDHA-205ENST00000504824 NBPF26B4DH59 902 aa22.69■■□□□ 1.22
SDHA-205ENST00000504824 CAMTA2O94983 1202 aa22.69■■□□□ 1.22
SDHA-205ENST00000504824 NBPF10Q6P3W6 841 aaKnown RBP22.69■■□□□ 1.22
SDHA-205ENST00000504824 NBPF15Q8N660 670 aa22.69■■□□□ 1.22
SDHA-205ENST00000504824 TSPYL4Q9UJ04 414 aa22.68■■□□□ 1.22
SDHA-205ENST00000504824 BCORQ6W2J9 1755 aa22.67■■□□□ 1.22
SDHA-205ENST00000504824 RRAGCQ9HB90 399 aa22.67■■□□□ 1.22
SDHA-205ENST00000504824 CCDC24Q8N4L8 307 aa22.66■■□□□ 1.22
SDHA-205ENST00000504824 ANKRD31Q8N7Z5 1873 aa22.66■■□□□ 1.22
SDHA-205ENST00000504824 BABAM1Q9NWV8 329 aa22.66■■□□□ 1.22
SDHA-205ENST00000504824 KDM3BQ7LBC6 1761 aa22.66■■□□□ 1.22
SDHA-205ENST00000504824 FSTL1Q12841 308 aa22.65■■□□□ 1.22
SDHA-205ENST00000504824 CLEC4GQ6UXB4 293 aa22.65■■□□□ 1.22
SDHA-205ENST00000504824 CNKSR1Q969H4 720 aa22.65■■□□□ 1.22
SDHA-205ENST00000504824 ZNF219Q9P2Y4 722 aaPredicted RBP22.65■■□□□ 1.22
SDHA-205ENST00000504824 CEP350Q5VT06 3117 aa22.64■■□□□ 1.21
SDHA-205ENST00000504824 NBPF5PQ86XG9 351 aaPredicted RBP22.64■■□□□ 1.21
SDHA-205ENST00000504824 TRIM35Q9UPQ4 493 aa22.64■■□□□ 1.21
SDHA-205ENST00000504824 TIAM2Q8IVF5 1701 aa22.63■■□□□ 1.21
SDHA-205ENST00000504824 C21orf2O43822 256 aa22.63■■□□□ 1.21
SDHA-205ENST00000504824 CCDC88AQ3V6T2 1871 aa22.63■■□□□ 1.21
SDHA-205ENST00000504824 COL11A2P13942 1736 aaPredicted RBP22.62■■□□□ 1.21
SDHA-205ENST00000504824 GLTPD2A6NH11 291 aa22.62■■□□□ 1.21
SDHA-205ENST00000504824 NFKBIEO00221 500 aa22.62■■□□□ 1.21
SDHA-205ENST00000504824 SOGA3Q5TF21 947 aa22.62■■□□□ 1.21
SDHA-205ENST00000504824 NGEFQ8N5V2 710 aa22.62■■□□□ 1.21
SDHA-205ENST00000504824 STYK1Q6J9G0 422 aa22.61■■□□□ 1.21
SDHA-205ENST00000504824 DPY19L2Q6NUT2 758 aa22.61■■□□□ 1.21
SDHA-205ENST00000504824 SMC1BQ8NDV3 1235 aa22.61■■□□□ 1.21
SDHA-205ENST00000504824 RGL2O15211 777 aa22.6■■□□□ 1.21
SDHA-205ENST00000504824 VEGFAP15692 232 aaPredicted RBP22.6■■□□□ 1.21
SDHA-205ENST00000504824 MASTLQ96GX5 879 aa22.6■■□□□ 1.21
SDHA-205ENST00000504824 WDR90Q96KV7 1748 aa22.6■■□□□ 1.21
SDHA-205ENST00000504824 CHL1O00533 1208 aa22.59■■□□□ 1.21
SDHA-205ENST00000504824 MYL6BP14649 208 aa22.59■■□□□ 1.21
SDHA-205ENST00000504824 TAOK3Q9H2K8 898 aa22.59■■□□□ 1.21
SDHA-205ENST00000504824 NIP7Q9Y221 180 aaKnown RBP eCLIP22.59■■□□□ 1.21
SDHA-205ENST00000504824 LAS1LQ9Y4W2 734 aaKnown RBP22.59■■□□□ 1.21
SDHA-205ENST00000504824 CACNA1SQ13698 1873 aa22.58■■□□□ 1.21
SDHA-205ENST00000504824 LAMB4A4D0S4 1761 aa22.58■■□□□ 1.21
SDHA-205ENST00000504824 SRGNP10124 158 aa22.58■■□□□ 1.21
SDHA-205ENST00000504824 ERFEQ4G0M1 354 aa22.58■■□□□ 1.21
SDHA-205ENST00000504824 TPTE2Q6XPS3 522 aa22.58■■□□□ 1.21
SDHA-205ENST00000504824 APAF1O14727 1248 aa22.57■■□□□ 1.2
SDHA-205ENST00000504824 EIF2S2P20042 333 aaKnown RBP22.57■■□□□ 1.2
SDHA-205ENST00000504824 PRELPP51888 382 aa22.57■■□□□ 1.2
SDHA-205ENST00000504824 HLFQ16534 295 aa22.57■■□□□ 1.2
SDHA-205ENST00000504824 PRPF40BQ6NWY9 871 aaKnown RBP22.57■■□□□ 1.2
SDHA-205ENST00000504824 FER1L6Q2WGJ9 1857 aa22.57■■□□□ 1.2
SDHA-205ENST00000504824 ERBB4Q15303 1308 aa22.57■■□□□ 1.2
SDHA-205ENST00000504824 GTF2E1P29083 439 aaPredicted RBP22.57■■□□□ 1.2
SDHA-205ENST00000504824 CCDC184Q52MB2 194 aa22.57■■□□□ 1.2
SDHA-205ENST00000504824 LTBP3Q9NS15 1303 aa22.56■■□□□ 1.2
SDHA-205ENST00000504824 ERVV-1B6SEH8 477 aa22.56■■□□□ 1.2
SDHA-205ENST00000504824 ARFGEF2Q9Y6D5 1785 aa22.55■■□□□ 1.2
SDHA-205ENST00000504824 FAM177BA6PVY3 158 aa22.55■■□□□ 1.2
SDHA-205ENST00000504824 ANP32CO43423 234 aa22.55■■□□□ 1.2
SDHA-205ENST00000504824 NPR1P16066 1061 aa22.55■■□□□ 1.2
SDHA-205ENST00000504824 KIF6Q6ZMV9 814 aa22.55■■□□□ 1.2
SDHA-205ENST00000504824 TTLL7Q6ZT98 887 aa22.55■■□□□ 1.2
SDHA-205ENST00000504824 DICER1Q9UPY3 1922 aaKnown RBP22.54■■□□□ 1.2
SDHA-205ENST00000504824 MAP3K15Q6ZN16 1313 aa22.54■■□□□ 1.2
SDHA-205ENST00000504824 SLX4Q8IY92 1834 aa22.53■■□□□ 1.2
SDHA-205ENST00000504824 CCDC93Q567U6 631 aa22.53■■□□□ 1.2
SDHA-205ENST00000504824 IFFO2Q5TF58 517 aa22.53■■□□□ 1.2
SDHA-205ENST00000504824 PDIA6Q15084 440 aa22.52■■□□□ 1.2
SDHA-205ENST00000504824 CFAP44Q96MT7 982 aa22.52■■□□□ 1.2
SDHA-205ENST00000504824 ZBTB3Q9H5J0 574 aa22.52■■□□□ 1.2
SDHA-205ENST00000504824 KRT24Q2M2I5 525 aa22.51■■□□□ 1.19
SDHA-205ENST00000504824 DNAJC5GQ8N7S2 189 aa22.51■■□□□ 1.19
SDHA-205ENST00000504824 NYXQ9GZU5 481 aa22.51■■□□□ 1.19
SDHA-205ENST00000504824 NECTIN2Q92692 538 aa22.5■■□□□ 1.19
SDHA-205ENST00000504824 KLRG1Q96E93 195 aa22.5■■□□□ 1.19
SDHA-205ENST00000504824 ANXA1P04083 346 aa22.49■■□□□ 1.19
SDHA-205ENST00000504824 HTRA3P83110 453 aa22.49■■□□□ 1.19
SDHA-205ENST00000504824 CALD1Q05682 793 aaKnown RBP22.49■■□□□ 1.19
SDHA-205ENST00000504824 LRP10Q7Z4F1 713 aa22.49■■□□□ 1.19
SDHA-205ENST00000504824 ALDH1B1P30837 517 aa22.48■■□□□ 1.19
SDHA-205ENST00000504824 PROSER3Q2NL68 480 aa22.48■■□□□ 1.19
SDHA-205ENST00000504824 MRS2Q9HD23 443 aa22.48■■□□□ 1.19
SDHA-205ENST00000504824 GIGYF2Q6Y7W6 1299 aaKnown RBP22.48■■□□□ 1.19
SDHA-205ENST00000504824 MBIPQ9NS73 344 aa22.48■■□□□ 1.19
SDHA-205ENST00000504824 KLRG2A4D1S0 409 aaPredicted RBP22.47■■□□□ 1.19
SDHA-205ENST00000504824 ZNF853P0CG23 659 aa22.47■■□□□ 1.19
SDHA-205ENST00000504824 GPTP24298 496 aa22.47■■□□□ 1.19
SDHA-205ENST00000504824 NUP98P52948 1817 aa22.46■■□□□ 1.19
SDHA-205ENST00000504824 HOXB7P09629 217 aa22.46■■□□□ 1.19
SDHA-205ENST00000504824 GNAI1P63096 354 aa22.46■■□□□ 1.19
SDHA-205ENST00000504824 FKBP4Q02790 459 aaKnown RBP eCLIP22.46■■□□□ 1.19
SDHA-205ENST00000504824 COPS6Q7L5N1 327 aa22.46■■□□□ 1.19
SDHA-205ENST00000504824 RTKN2Q8IZC4 609 aa22.46■■□□□ 1.19
SDHA-205ENST00000504824 DDX21Q9NR30 783 aaKnown RBP eCLIP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms