RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 RARSP54136 660 aaKnown RBP6.4□□□□□ -1.38
LMNB1-208ENST00000504788 SPDYE2Q495Y8 402 aa6.4□□□□□ -1.38
LMNB1-208ENST00000504788 G2E3Q7L622 706 aa6.4□□□□□ -1.38
LMNB1-208ENST00000504788 COL23A1Q86Y22 540 aaPredicted RBP6.4□□□□□ -1.38
LMNB1-208ENST00000504788 SSH1Q8WYL5 1049 aa6.4□□□□□ -1.38
LMNB1-208ENST00000504788 YTHDC1Q96MU7 727 aaKnown RBP6.4□□□□□ -1.38
LMNB1-208ENST00000504788 PHAXQ9H814 394 aaKnown RBP6.4□□□□□ -1.38
LMNB1-208ENST00000504788 KIF13BQ9NQT8 1826 aa6.4□□□□□ -1.39
LMNB1-208ENST00000504788 ADCY9O60503 1353 aa6.39□□□□□ -1.39
LMNB1-208ENST00000504788 STARD3NLO95772 234 aa6.39□□□□□ -1.39
LMNB1-208ENST00000504788 SSFA2P28290 1259 aa6.39□□□□□ -1.39
LMNB1-208ENST00000504788 CLCN6P51797 869 aa6.39□□□□□ -1.39
LMNB1-208ENST00000504788 HDGFL1Q5TGJ6 251 aa6.39□□□□□ -1.39
LMNB1-208ENST00000504788 TTLL7Q6ZT98 887 aa6.39□□□□□ -1.39
LMNB1-208ENST00000504788 MRPL50Q8N5N7 158 aaKnown RBP6.39□□□□□ -1.39
LMNB1-208ENST00000504788 ARHGEF1Q92888 912 aaKnown RBP6.39□□□□□ -1.39
LMNB1-208ENST00000504788 ZNF428Q96B54 188 aa6.39□□□□□ -1.39
LMNB1-208ENST00000504788 SGIP1Q9BQI5 828 aa6.39□□□□□ -1.39
LMNB1-208ENST00000504788 RNF123Q5XPI4 1314 aa6.39□□□□□ -1.39
LMNB1-208ENST00000504788 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.39□□□□□ -1.39
LMNB1-208ENST00000504788 TCERG1O14776 1098 aaKnown RBP6.39□□□□□ -1.39
LMNB1-208ENST00000504788 CAMTA2O94983 1202 aa6.39□□□□□ -1.39
LMNB1-208ENST00000504788 EIF2S2P20042 333 aaKnown RBP6.39□□□□□ -1.39
LMNB1-208ENST00000504788 SF3B2Q13435 895 aaKnown RBP6.39□□□□□ -1.39
LMNB1-208ENST00000504788 ALDH1L2Q3SY69 923 aa6.39□□□□□ -1.39
LMNB1-208ENST00000504788 DBF4Q9UBU7 674 aaPredicted RBP6.39□□□□□ -1.39
LMNB1-208ENST00000504788 ANKRD31Q8N7Z5 1873 aa6.38□□□□□ -1.39
LMNB1-208ENST00000504788 DDX60Q8IY21 1712 aaKnown RBP6.38□□□□□ -1.39
LMNB1-208ENST00000504788 USP42Q9H9J4 1324 aaKnown RBP6.38□□□□□ -1.39
LMNB1-208ENST00000504788 GNPATO15228 680 aa6.38□□□□□ -1.39
LMNB1-208ENST00000504788 BCAR3O75815 825 aa6.38□□□□□ -1.39
LMNB1-208ENST00000504788 GYS1P13807 737 aa6.38□□□□□ -1.39
LMNB1-208ENST00000504788 NECTIN2Q92692 538 aa6.38□□□□□ -1.39
LMNB1-208ENST00000504788 ATP10DQ9P241 1426 aa6.38□□□□□ -1.39
LMNB1-208ENST00000504788 IBTKQ9P2D0 1353 aaPredicted RBP6.37□□□□□ -1.39
LMNB1-208ENST00000504788 LAMB2P55268 1798 aa6.37□□□□□ -1.39
LMNB1-208ENST00000504788 RGL2O15211 777 aa6.37□□□□□ -1.39
LMNB1-208ENST00000504788 CANXP27824 592 aaKnown RBP6.37□□□□□ -1.39
LMNB1-208ENST00000504788 HLFQ16534 295 aa6.37□□□□□ -1.39
LMNB1-208ENST00000504788 CCDC30Q5VVM6 783 aa6.37□□□□□ -1.39
LMNB1-208ENST00000504788 SRP68Q9UHB9 627 aaKnown RBP6.37□□□□□ -1.39
LMNB1-208ENST00000504788 NARFQ9UHQ1 456 aa6.37□□□□□ -1.39
LMNB1-208ENST00000504788 TNNQ9UQP3 1299 aa6.37□□□□□ -1.39
LMNB1-208ENST00000504788 CLEC11AQ9Y240 323 aa6.37□□□□□ -1.39
LMNB1-208ENST00000504788 BRCA1P38398 1863 aaKnown RBP6.37□□□□□ -1.39
LMNB1-208ENST00000504788 TNRC6CQ9HCJ0 1690 aaKnown RBP6.37□□□□□ -1.39
LMNB1-208ENST00000504788 MYL6BP14649 208 aa6.36□□□□□ -1.39
LMNB1-208ENST00000504788 TM4SF1P30408 202 aa6.36□□□□□ -1.39
LMNB1-208ENST00000504788 FLIIQ13045 1269 aa6.36□□□□□ -1.39
LMNB1-208ENST00000504788 COPS6Q7L5N1 327 aa6.36□□□□□ -1.39
LMNB1-208ENST00000504788 XAGE3Q8WTP9 111 aa6.36□□□□□ -1.39
LMNB1-208ENST00000504788 BCL2L13Q9BXK5 485 aa6.36□□□□□ -1.39
LMNB1-208ENST00000504788 HYPKQ9NX55 129 aa6.36□□□□□ -1.39
LMNB1-208ENST00000504788 TBC1D2BQ9UPU7 963 aa6.36□□□□□ -1.39
LMNB1-208ENST00000504788 RTCBQ9Y3I0 505 aaKnown RBP6.36□□□□□ -1.39
LMNB1-208ENST00000504788 COL4A1P02462 1669 aa6.36□□□□□ -1.39
LMNB1-208ENST00000504788 MAP3K15Q6ZN16 1313 aa6.36□□□□□ -1.39
LMNB1-208ENST00000504788 UBN2Q6ZU65 1347 aa6.36□□□□□ -1.39
LMNB1-208ENST00000504788 PXDNLA1KZ92 1463 aa6.36□□□□□ -1.39
LMNB1-208ENST00000504788 LRP5O75197 1615 aa6.36□□□□□ -1.39
LMNB1-208ENST00000504788 DLEC1Q9Y238 1755 aa6.36□□□□□ -1.39
LMNB1-208ENST00000504788 ERVV-1B6SEH8 477 aa6.36□□□□□ -1.39
LMNB1-208ENST00000504788 IGKV5-2P06315 115 aa6.36□□□□□ -1.39
LMNB1-208ENST00000504788 PTGER2P43116 358 aa6.36□□□□□ -1.39
LMNB1-208ENST00000504788 FKBP8Q14318 412 aa6.36□□□□□ -1.39
LMNB1-208ENST00000504788 R3HDM1Q15032 1099 aaKnown RBP6.36□□□□□ -1.39
LMNB1-208ENST00000504788 GIGYF2Q6Y7W6 1299 aaKnown RBP6.36□□□□□ -1.39
LMNB1-208ENST00000504788 AK7Q96M32 723 aa6.36□□□□□ -1.39
LMNB1-208ENST00000504788 TFCP2L1Q9NZI6 479 aa6.36□□□□□ -1.39
LMNB1-208ENST00000504788 COL11A2P13942 1736 aaPredicted RBP6.35□□□□□ -1.39
LMNB1-208ENST00000504788 DDR1Q08345 913 aa6.35□□□□□ -1.39
LMNB1-208ENST00000504788 TRAPPC3LQ5T215 181 aa6.35□□□□□ -1.39
LMNB1-208ENST00000504788 USPL1Q5W0Q7 1092 aa6.35□□□□□ -1.39
LMNB1-208ENST00000504788 CLEC4GQ6UXB4 293 aa6.35□□□□□ -1.39
LMNB1-208ENST00000504788 DZIP3Q86Y13 1208 aaKnown RBP6.35□□□□□ -1.39
LMNB1-208ENST00000504788 ZNF34Q8IZ26 560 aa6.35□□□□□ -1.39
LMNB1-208ENST00000504788 PLBD2Q8NHP8 589 aa6.35□□□□□ -1.39
LMNB1-208ENST00000504788 ARHGAP45Q92619 1136 aa6.35□□□□□ -1.39
LMNB1-208ENST00000504788 ISCA1Q9BUE6 129 aa6.35□□□□□ -1.39
LMNB1-208ENST00000504788 STK32BQ9NY57 414 aa6.35□□□□□ -1.39
LMNB1-208ENST00000504788 ABCC4O15439 1325 aa6.35□□□□□ -1.39
LMNB1-208ENST00000504788 MYH3P11055 1940 aa6.34□□□□□ -1.39
LMNB1-208ENST00000504788 PI4KAP2A4QPH2 592 aa6.34□□□□□ -1.39
LMNB1-208ENST00000504788 PSDA5PKW4 1024 aaPredicted RBP6.34□□□□□ -1.39
LMNB1-208ENST00000504788 F6X3S4 739 aa6.34□□□□□ -1.39
LMNB1-208ENST00000504788 PHF14O94880 888 aa6.34□□□□□ -1.39
LMNB1-208ENST00000504788 RLBP1P12271 317 aa6.34□□□□□ -1.39
LMNB1-208ENST00000504788 TRIM27P14373 513 aa6.34□□□□□ -1.39
LMNB1-208ENST00000504788 HMGB2P26583 209 aaKnown RBP6.34□□□□□ -1.39
LMNB1-208ENST00000504788 CASP7P55210 303 aa6.34□□□□□ -1.39
LMNB1-208ENST00000504788 TRIM28Q13263 835 aaKnown RBP6.34□□□□□ -1.39
LMNB1-208ENST00000504788 BEND3Q5T5X7 828 aa6.34□□□□□ -1.39
LMNB1-208ENST00000504788 KSR2Q6VAB6 950 aa6.34□□□□□ -1.39
LMNB1-208ENST00000504788 ANKRD13DQ6ZTN6 518 aa6.34□□□□□ -1.39
LMNB1-208ENST00000504788 PI4KAP1Q8N8J0 262 aa6.34□□□□□ -1.39
LMNB1-208ENST00000504788 FLAD1Q8NFF5 587 aa6.34□□□□□ -1.39
LMNB1-208ENST00000504788 SLC16A10Q8TF71 515 aa6.34□□□□□ -1.39
LMNB1-208ENST00000504788 RCAN3Q9UKA8 241 aa6.34□□□□□ -1.39
LMNB1-208ENST00000504788 PTPRCP08575 1304 aa6.34□□□□□ -1.39
LMNB1-208ENST00000504788 TAF1P21675 1872 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms