RNA–Protein interactions for RNA: ENST00000504263.1

PCAT4-201, prostate cancer associated transcript 4, humanhuman

TSL 1 (best) BASIC

Gene PCAT4, Length 2,091 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT4-201ENST00000504263 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.28□□□□□ -1.72
PCAT4-201ENST00000504263 CFAP44Q96MT7 982 aa4.28□□□□□ -1.72
PCAT4-201ENST00000504263 DONSONQ9NYP3 566 aa4.28□□□□□ -1.72
PCAT4-201ENST00000504263 MROH1Q8NDA8 1641 aa4.28□□□□□ -1.72
PCAT4-201ENST00000504263 ADGRL2O95490 1459 aa4.28□□□□□ -1.72
PCAT4-201ENST00000504263 ERVK-7P63135 1459 aa4.28□□□□□ -1.72
PCAT4-201ENST00000504263 PRDM15P57071 1507 aaPredicted RBP4.27□□□□□ -1.73
PCAT4-201ENST00000504263 PARD3Q8TEW0 1356 aa4.27□□□□□ -1.73
PCAT4-201ENST00000504263 DEPDC5O75140 1603 aa4.27□□□□□ -1.73
PCAT4-201ENST00000504263 LTBP4Q8N2S1 1624 aa4.27□□□□□ -1.73
PCAT4-201ENST00000504263 LOC102724159A0A0B4J2E5 919 aa4.27□□□□□ -1.73
PCAT4-201ENST00000504263 DHX16O60231 1041 aaKnown RBP4.27□□□□□ -1.73
PCAT4-201ENST00000504263 ECM2O94769 699 aaPredicted RBP4.27□□□□□ -1.73
PCAT4-201ENST00000504263 U2AF2P26368 475 aaKnown RBP eCLIP4.27□□□□□ -1.73
PCAT4-201ENST00000504263 CYP2C19P33261 490 aa4.27□□□□□ -1.73
PCAT4-201ENST00000504263 IDI1Q13907 227 aa4.27□□□□□ -1.73
PCAT4-201ENST00000504263 NOLC1Q14978 699 aaKnown RBP eCLIP4.27□□□□□ -1.73
PCAT4-201ENST00000504263 PWP2Q15269 919 aaKnown RBP4.27□□□□□ -1.73
PCAT4-201ENST00000504263 UVSSAQ2YD98 709 aa4.27□□□□□ -1.73
PCAT4-201ENST00000504263 C20orf194Q5TEA3 1177 aa4.27□□□□□ -1.73
PCAT4-201ENST00000504263 TXNDC2Q86VQ3 553 aa4.27□□□□□ -1.73
PCAT4-201ENST00000504263 KRT222Q8N1A0 295 aa4.27□□□□□ -1.73
PCAT4-201ENST00000504263 TRIM47Q96LD4 638 aa4.27□□□□□ -1.73
PCAT4-201ENST00000504263 RASSF4Q9H2L5 321 aa4.27□□□□□ -1.73
PCAT4-201ENST00000504263 SENP2Q9HC62 589 aa4.27□□□□□ -1.73
PCAT4-201ENST00000504263 MED4Q9NPJ6 270 aa4.27□□□□□ -1.73
PCAT4-201ENST00000504263 IQSEC2Q5JU85 1478 aa4.27□□□□□ -1.73
PCAT4-201ENST00000504263 ROCK1Q13464 1354 aa4.27□□□□□ -1.73
PCAT4-201ENST00000504263 UBAP1LF5GYI3 381 aa4.26□□□□□ -1.73
PCAT4-201ENST00000504263 PLIN1O60240 522 aa4.26□□□□□ -1.73
PCAT4-201ENST00000504263 TPM3P06753 285 aa4.26□□□□□ -1.73
PCAT4-201ENST00000504263 APLP1P51693 650 aa4.26□□□□□ -1.73
PCAT4-201ENST00000504263 HDGFP51858 240 aaKnown RBP4.26□□□□□ -1.73
PCAT4-201ENST00000504263 CHAF1AQ13111 956 aaPredicted RBP4.26□□□□□ -1.73
PCAT4-201ENST00000504263 PDE3AQ14432 1141 aa4.26□□□□□ -1.73
PCAT4-201ENST00000504263 NBPF11Q86T75 865 aa4.26□□□□□ -1.73
PCAT4-201ENST00000504263 CERS3Q8IU89 383 aa4.26□□□□□ -1.73
PCAT4-201ENST00000504263 AEBP1Q8IUX7 1158 aa4.26□□□□□ -1.73
PCAT4-201ENST00000504263 C22orf23Q9BZE7 217 aa4.26□□□□□ -1.73
PCAT4-201ENST00000504263 PKD2L1Q9P0L9 805 aa4.26□□□□□ -1.73
PCAT4-201ENST00000504263 PLEKHH1Q9ULM0 1364 aa4.26□□□□□ -1.73
PCAT4-201ENST00000504263 NPHP4O75161 1426 aaPredicted RBP4.26□□□□□ -1.73
PCAT4-201ENST00000504263 MED14O60244 1454 aa4.26□□□□□ -1.73
PCAT4-201ENST00000504263 LMTK2Q8IWU2 1503 aa4.26□□□□□ -1.73
PCAT4-201ENST00000504263 TTC36A6NLP5 189 aa4.26□□□□□ -1.73
PCAT4-201ENST00000504263 TOM1O60784 492 aa4.26□□□□□ -1.73
PCAT4-201ENST00000504263 TNNT3P45378 269 aaPredicted RBP4.26□□□□□ -1.73
PCAT4-201ENST00000504263 GSCP56915 257 aaPredicted RBP4.26□□□□□ -1.73
PCAT4-201ENST00000504263 MAP2K1Q02750 393 aaPredicted RBP4.26□□□□□ -1.73
PCAT4-201ENST00000504263 TRDNQ13061 729 aa4.26□□□□□ -1.73
PCAT4-201ENST00000504263 NBPF9Q3BBW0 867 aa4.26□□□□□ -1.73
PCAT4-201ENST00000504263 ZSCAN23Q3MJ62 389 aa4.26□□□□□ -1.73
PCAT4-201ENST00000504263 SLFNL1Q499Z3 407 aa4.26□□□□□ -1.73
PCAT4-201ENST00000504263 CT47A1Q5JQC4 288 aaPredicted RBP4.26□□□□□ -1.73
PCAT4-201ENST00000504263 SWT1Q5T5J6 900 aaKnown RBP4.26□□□□□ -1.73
PCAT4-201ENST00000504263 LRSAM1Q6UWE0 723 aa4.26□□□□□ -1.73
PCAT4-201ENST00000504263 SAMD7Q7Z3H4 446 aa4.26□□□□□ -1.73
PCAT4-201ENST00000504263 ANKLE1Q8NAG6 615 aa4.26□□□□□ -1.73
PCAT4-201ENST00000504263 RBSNQ9H1K0 784 aa4.26□□□□□ -1.73
PCAT4-201ENST00000504263 UBR1Q8IWV7 1749 aa4.26□□□□□ -1.73
PCAT4-201ENST00000504263 VWDEQ8N2E2 1590 aa4.25□□□□□ -1.73
PCAT4-201ENST00000504263 GOLGA6L6A8MZA4 724 aa4.25□□□□□ -1.73
PCAT4-201ENST00000504263 CALRP27797 417 aaKnown RBP4.25□□□□□ -1.73
PCAT4-201ENST00000504263 LTKP29376 864 aa4.25□□□□□ -1.73
PCAT4-201ENST00000504263 CASQ1P31415 396 aa4.25□□□□□ -1.73
PCAT4-201ENST00000504263 RAD51AP2Q09MP3 1159 aa4.25□□□□□ -1.73
PCAT4-201ENST00000504263 TMEM132AQ24JP5 1023 aa4.25□□□□□ -1.73
PCAT4-201ENST00000504263 LMOD2Q6P5Q4 547 aa4.25□□□□□ -1.73
PCAT4-201ENST00000504263 TRMT2AQ8IZ69 625 aaKnown RBP4.25□□□□□ -1.73
PCAT4-201ENST00000504263 FAM184AQ8NB25 1140 aa4.25□□□□□ -1.73
PCAT4-201ENST00000504263 KIF18AQ8NI77 898 aa4.25□□□□□ -1.73
PCAT4-201ENST00000504263 PMFBP1Q8TBY8 1022 aa4.25□□□□□ -1.73
PCAT4-201ENST00000504263 L3MBTL2Q969R5 705 aa4.25□□□□□ -1.73
PCAT4-201ENST00000504263 ATP13A2Q9NQ11 1180 aa4.25□□□□□ -1.73
PCAT4-201ENST00000504263 RSPH14Q9UHP6 348 aa4.25□□□□□ -1.73
PCAT4-201ENST00000504263 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.25□□□□□ -1.73
PCAT4-201ENST00000504263 DDX49Q9Y6V7 483 aaKnown RBP4.25□□□□□ -1.73
PCAT4-201ENST00000504263 IQGAP1P46940 1657 aa4.25□□□□□ -1.73
PCAT4-201ENST00000504263 ZNF521Q96K83 1311 aa4.25□□□□□ -1.73
PCAT4-201ENST00000504263 SCAF11Q99590 1463 aaKnown RBP4.25□□□□□ -1.73
PCAT4-201ENST00000504263 CPS1P31327 1500 aa4.25□□□□□ -1.73
PCAT4-201ENST00000504263 NEURL4Q96JN8 1562 aa4.25□□□□□ -1.73
PCAT4-201ENST00000504263 K7ELQ4 463 aaPredicted RBP4.25□□□□□ -1.73
PCAT4-201ENST00000504263 COPS2P61201 443 aa4.25□□□□□ -1.73
PCAT4-201ENST00000504263 DUSP27Q5VZP5 1158 aa4.25□□□□□ -1.73
PCAT4-201ENST00000504263 NBPF10Q6P3W6 841 aaKnown RBP4.25□□□□□ -1.73
PCAT4-201ENST00000504263 KIF1BPQ96EK5 621 aa4.25□□□□□ -1.73
PCAT4-201ENST00000504263 CDCA7LQ96GN5 454 aa4.25□□□□□ -1.73
PCAT4-201ENST00000504263 TACO1Q9BSH4 297 aaKnown RBP4.25□□□□□ -1.73
PCAT4-201ENST00000504263 NUP155O75694 1391 aa4.24□□□□□ -1.73
PCAT4-201ENST00000504263 TMEM2Q9UHN6 1383 aa4.24□□□□□ -1.73
PCAT4-201ENST00000504263 KDM5AP29375 1690 aaKnown RBP4.24□□□□□ -1.73
PCAT4-201ENST00000504263 RGL2O15211 777 aa4.24□□□□□ -1.73
PCAT4-201ENST00000504263 ZPR1O75312 459 aa4.24□□□□□ -1.73
PCAT4-201ENST00000504263 BAG4O95429 457 aaKnown RBP4.24□□□□□ -1.73
PCAT4-201ENST00000504263 HNRNPH2P55795 449 aaKnown RBP4.24□□□□□ -1.73
PCAT4-201ENST00000504263 NCBP1Q09161 790 aaKnown RBP4.24□□□□□ -1.73
PCAT4-201ENST00000504263 ZKSCAN8Q15776 578 aaPredicted RBP4.24□□□□□ -1.73
PCAT4-201ENST00000504263 SUGP1Q8IWZ8 645 aaKnown RBP4.24□□□□□ -1.73
PCAT4-201ENST00000504263 TXLNBQ8N3L3 684 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms