RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 MAP3K2Q9Y2U5 619 aa17.58■□□□□ 0.4
CYSTM1-202ENST00000504227 C4BP0C0L5 1744 aa17.58■□□□□ 0.4
CYSTM1-202ENST00000504227 COL15A1P39059 1388 aa17.57■□□□□ 0.4
CYSTM1-202ENST00000504227 F6X3S4 739 aa17.57■□□□□ 0.4
CYSTM1-202ENST00000504227 SSFA2P28290 1259 aa17.57■□□□□ 0.4
CYSTM1-202ENST00000504227 DNAAF4Q8WXU2 420 aa17.57■□□□□ 0.4
CYSTM1-202ENST00000504227 MAP3K15Q6ZN16 1313 aa17.56■□□□□ 0.4
CYSTM1-202ENST00000504227 RREB1Q92766 1687 aa17.56■□□□□ 0.4
CYSTM1-202ENST00000504227 ERVV-1B6SEH8 477 aa17.56■□□□□ 0.4
CYSTM1-202ENST00000504227 PHF14O94880 888 aa17.56■□□□□ 0.4
CYSTM1-202ENST00000504227 NEFLP07196 543 aa17.56■□□□□ 0.4
CYSTM1-202ENST00000504227 ZNF827Q17R98 1081 aa17.56■□□□□ 0.4
CYSTM1-202ENST00000504227 SLC4A10Q6U841 1118 aa17.56■□□□□ 0.4
CYSTM1-202ENST00000504227 FLAD1Q8NFF5 587 aa17.56■□□□□ 0.4
CYSTM1-202ENST00000504227 ZBTB3Q9H5J0 574 aa17.56■□□□□ 0.4
CYSTM1-202ENST00000504227 TNNQ9UQP3 1299 aa17.56■□□□□ 0.4
CYSTM1-202ENST00000504227 ADCY9O60503 1353 aa17.55■□□□□ 0.4
CYSTM1-202ENST00000504227 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.55■□□□□ 0.4
CYSTM1-202ENST00000504227 ZPR1O75312 459 aa17.55■□□□□ 0.4
CYSTM1-202ENST00000504227 RFC4P35249 363 aa17.55■□□□□ 0.4
CYSTM1-202ENST00000504227 NEXNQ0ZGT2 675 aa17.55■□□□□ 0.4
CYSTM1-202ENST00000504227 PANK1Q8TE04 598 aa17.55■□□□□ 0.4
CYSTM1-202ENST00000504227 ARHGEF1Q92888 912 aaKnown RBP17.55■□□□□ 0.4
CYSTM1-202ENST00000504227 ABCC4O15439 1325 aa17.54■□□□□ 0.4
CYSTM1-202ENST00000504227 CCT4P50991 539 aaKnown RBP17.54■□□□□ 0.4
CYSTM1-202ENST00000504227 SLC15A2Q16348 729 aa17.54■□□□□ 0.4
CYSTM1-202ENST00000504227 C20orf194Q5TEA3 1177 aa17.54■□□□□ 0.4
CYSTM1-202ENST00000504227 SMIM5Q71RC9 77 aa17.54■□□□□ 0.4
CYSTM1-202ENST00000504227 METTL22Q9BUU2 404 aaPredicted RBP17.54■□□□□ 0.4
CYSTM1-202ENST00000504227 NARFQ9UHQ1 456 aa17.54■□□□□ 0.4
CYSTM1-202ENST00000504227 CAMTA2O94983 1202 aa17.53■□□□□ 0.4
CYSTM1-202ENST00000504227 RLBP1P12271 317 aa17.53■□□□□ 0.4
CYSTM1-202ENST00000504227 HSP90AB3PQ58FF7 597 aa17.53■□□□□ 0.4
CYSTM1-202ENST00000504227 GIGYF2Q6Y7W6 1299 aaKnown RBP17.53■□□□□ 0.4
CYSTM1-202ENST00000504227 AMIGO3Q86WK7 504 aa17.53■□□□□ 0.4
CYSTM1-202ENST00000504227 ZNF652Q9Y2D9 606 aa17.53■□□□□ 0.4
CYSTM1-202ENST00000504227 RGL2O15211 777 aa17.52■□□□□ 0.4
CYSTM1-202ENST00000504227 INTS3Q68E01 1043 aaKnown RBP17.52■□□□□ 0.4
CYSTM1-202ENST00000504227 TMEM57Q8N5G2 664 aa17.52■□□□□ 0.4
CYSTM1-202ENST00000504227 MYD88Q99836 296 aa17.52■□□□□ 0.4
CYSTM1-202ENST00000504227 SRCIN1Q9C0H9 1055 aa17.52■□□□□ 0.4
CYSTM1-202ENST00000504227 ANO8Q9HCE9 1232 aaPredicted RBP17.52■□□□□ 0.4
CYSTM1-202ENST00000504227 MSH5O43196 834 aa17.51■□□□□ 0.39
CYSTM1-202ENST00000504227 IRX6P78412 446 aaPredicted RBP17.51■□□□□ 0.39
CYSTM1-202ENST00000504227 TCIRG1Q13488 830 aa17.51■□□□□ 0.39
CYSTM1-202ENST00000504227 HLFQ16534 295 aa17.51■□□□□ 0.39
CYSTM1-202ENST00000504227 BEND3Q5T5X7 828 aa17.51■□□□□ 0.39
CYSTM1-202ENST00000504227 CLEC4GQ6UXB4 293 aa17.51■□□□□ 0.39
CYSTM1-202ENST00000504227 ITPRIPQ8IWB1 547 aa17.51■□□□□ 0.39
CYSTM1-202ENST00000504227 LINS1Q8NG48 757 aa17.51■□□□□ 0.39
CYSTM1-202ENST00000504227 ALDH1L1O75891 902 aa17.5■□□□□ 0.39
CYSTM1-202ENST00000504227 USPL1Q5W0Q7 1092 aa17.5■□□□□ 0.39
CYSTM1-202ENST00000504227 SRP68Q9UHB9 627 aaKnown RBP17.5■□□□□ 0.39
CYSTM1-202ENST00000504227 COG6Q9Y2V7 657 aa17.5■□□□□ 0.39
CYSTM1-202ENST00000504227 USP42Q9H9J4 1324 aaKnown RBP17.49■□□□□ 0.39
CYSTM1-202ENST00000504227 MVPQ14764 893 aaKnown RBP17.49■□□□□ 0.39
CYSTM1-202ENST00000504227 COL23A1Q86Y22 540 aaPredicted RBP17.49■□□□□ 0.39
CYSTM1-202ENST00000504227 CHMP4BQ9H444 224 aaKnown RBP17.49■□□□□ 0.39
CYSTM1-202ENST00000504227 DDX19BQ9UMR2 479 aa17.49■□□□□ 0.39
CYSTM1-202ENST00000504227 PNPLA7Q6ZV29 1317 aa17.48■□□□□ 0.39
CYSTM1-202ENST00000504227 ATP10DQ9P241 1426 aa17.48■□□□□ 0.39
CYSTM1-202ENST00000504227 UBR3Q6ZT12 1888 aa17.48■□□□□ 0.39
CYSTM1-202ENST00000504227 ATP5J2-PTCD1G3V325 749 aa17.48■□□□□ 0.39
CYSTM1-202ENST00000504227 CRBNQ96SW2 442 aa17.48■□□□□ 0.39
CYSTM1-202ENST00000504227 PXDNLA1KZ92 1463 aa17.48■□□□□ 0.39
CYSTM1-202ENST00000504227 NEURL1BA8MQ27 555 aa17.47■□□□□ 0.39
CYSTM1-202ENST00000504227 IGKV5-2P06315 115 aa17.47■□□□□ 0.39
CYSTM1-202ENST00000504227 TRIM28Q13263 835 aaKnown RBP17.47■□□□□ 0.39
CYSTM1-202ENST00000504227 CCDC191Q8NCU4 936 aa17.47■□□□□ 0.39
CYSTM1-202ENST00000504227 ISCA1Q9BUE6 129 aa17.47■□□□□ 0.39
CYSTM1-202ENST00000504227 NUP188Q5SRE5 1749 aa17.47■□□□□ 0.39
CYSTM1-202ENST00000504227 CWF19L2Q2TBE0 894 aaKnown RBP17.46■□□□□ 0.39
CYSTM1-202ENST00000504227 ZNF34Q8IZ26 560 aa17.46■□□□□ 0.39
CYSTM1-202ENST00000504227 BCL2L12Q9HB09 334 aa17.46■□□□□ 0.39
CYSTM1-202ENST00000504227 CWC25Q9NXE8 425 aaPredicted RBP17.46■□□□□ 0.39
CYSTM1-202ENST00000504227 GYS1P13807 737 aa17.45■□□□□ 0.38
CYSTM1-202ENST00000504227 GPTP24298 496 aa17.45■□□□□ 0.38
CYSTM1-202ENST00000504227 GCKRQ14397 625 aa17.45■□□□□ 0.38
CYSTM1-202ENST00000504227 PARP10Q53GL7 1025 aa17.45■□□□□ 0.38
CYSTM1-202ENST00000504227 C9orf78Q9NZ63 289 aaPredicted RBP17.45■□□□□ 0.38
CYSTM1-202ENST00000504227 NIP7Q9Y221 180 aaKnown RBP eCLIP17.45■□□□□ 0.38
CYSTM1-202ENST00000504227 ARFGEF2Q9Y6D5 1785 aa17.44■□□□□ 0.38
CYSTM1-202ENST00000504227 ZBTB7BO15156 539 aaPredicted RBP17.44■□□□□ 0.38
CYSTM1-202ENST00000504227 FKBP8Q14318 412 aa17.44■□□□□ 0.38
CYSTM1-202ENST00000504227 BICDL1Q6ZP65 573 aa17.44■□□□□ 0.38
CYSTM1-202ENST00000504227 NLRP10Q86W26 655 aa17.44■□□□□ 0.38
CYSTM1-202ENST00000504227 NLGN1Q8N2Q7 840 aa17.44■□□□□ 0.38
CYSTM1-202ENST00000504227 EXOC6Q8TAG9 804 aa17.44■□□□□ 0.38
CYSTM1-202ENST00000504227 SETDB2Q96T68 719 aa17.44■□□□□ 0.38
CYSTM1-202ENST00000504227 GNAI3P08754 354 aa17.43■□□□□ 0.38
CYSTM1-202ENST00000504227 AAMPQ13685 434 aa17.43■□□□□ 0.38
CYSTM1-202ENST00000504227 TBC1D9BQ66K14 1250 aa17.43■□□□□ 0.38
CYSTM1-202ENST00000504227 USP44Q9H0E7 712 aa17.43■□□□□ 0.38
CYSTM1-202ENST00000504227 HDAC5Q9UQL6 1122 aa17.43■□□□□ 0.38
CYSTM1-202ENST00000504227 NUP98P52948 1817 aa17.42■□□□□ 0.38
CYSTM1-202ENST00000504227 IBTKQ9P2D0 1353 aaPredicted RBP17.42■□□□□ 0.38
CYSTM1-202ENST00000504227 GRM8O00222 908 aa17.42■□□□□ 0.38
CYSTM1-202ENST00000504227 PPP1R42Q7Z4L9 355 aa17.42■□□□□ 0.38
CYSTM1-202ENST00000504227 UBTFL1P0CB47 393 aaPredicted RBP17.41■□□□□ 0.38
CYSTM1-202ENST00000504227 SLC16A10Q8TF71 515 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms