RNA–Protein interactions for RNA: ENST00000504136.1

SSBP2-202, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 927 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-202ENST00000504136 SCN11AQ9UI33 1791 aa12.05□□□□□ -0.48
SSBP2-202ENST00000504136 KDM6AO15550 1401 aaPredicted RBP12.04□□□□□ -0.48
SSBP2-202ENST00000504136 SEMA3EO15041 775 aa12.04□□□□□ -0.48
SSBP2-202ENST00000504136 PBX2P40425 430 aa12.04□□□□□ -0.48
SSBP2-202ENST00000504136 MLLT3P42568 568 aaPredicted RBP12.04□□□□□ -0.48
SSBP2-202ENST00000504136 AMOTQ4VCS5 1084 aa12.04□□□□□ -0.48
SSBP2-202ENST00000504136 TYW1BQ6NUM6 668 aa12.04□□□□□ -0.48
SSBP2-202ENST00000504136 CCNL1Q9UK58 526 aaPredicted RBP12.04□□□□□ -0.48
SSBP2-202ENST00000504136 MRC1P22897 1456 aa12.03□□□□□ -0.48
SSBP2-202ENST00000504136 ZBTB7AO95365 584 aa12.03□□□□□ -0.48
SSBP2-202ENST00000504136 HSP90AB1P08238 724 aaKnown RBP12.03□□□□□ -0.48
SSBP2-202ENST00000504136 MTHFSP49914 203 aa12.03□□□□□ -0.48
SSBP2-202ENST00000504136 FBXW7Q969H0 707 aa12.03□□□□□ -0.48
SSBP2-202ENST00000504136 COL5A3P25940 1745 aaPredicted RBP12.03□□□□□ -0.48
SSBP2-202ENST00000504136 ERVV-2B6SEH9 535 aa12.02□□□□□ -0.49
SSBP2-202ENST00000504136 PLEKHO1Q53GL0 409 aaPredicted RBP12.02□□□□□ -0.49
SSBP2-202ENST00000504136 MPRIPQ6WCQ1 1025 aa12.02□□□□□ -0.49
SSBP2-202ENST00000504136 AEBP1Q8IUX7 1158 aa12.02□□□□□ -0.49
SSBP2-202ENST00000504136 DCAF5Q96JK2 942 aa12.02□□□□□ -0.49
SSBP2-202ENST00000504136 VIRMAQ69YN4 1812 aaKnown RBP12.02□□□□□ -0.49
SSBP2-202ENST00000504136 GRXCR2A6NFK2 248 aa12.01□□□□□ -0.49
SSBP2-202ENST00000504136 OSBPP22059 807 aa12.01□□□□□ -0.49
SSBP2-202ENST00000504136 KCNQ4P56696 695 aa12.01□□□□□ -0.49
SSBP2-202ENST00000504136 NBR1Q14596 966 aa12.01□□□□□ -0.49
SSBP2-202ENST00000504136 TESPA1A2RU30 521 aaPredicted RBP12□□□□□ -0.49
SSBP2-202ENST00000504136 ARHGAP33O14559 1287 aa12□□□□□ -0.49
SSBP2-202ENST00000504136 SULT6B1Q6IMI4 303 aa12□□□□□ -0.49
SSBP2-202ENST00000504136 TMOD3Q9NYL9 352 aa12□□□□□ -0.49
SSBP2-202ENST00000504136 LOC102724428A0A0B4J2F2 783 aa11.99□□□□□ -0.49
SSBP2-202ENST00000504136 SIK1P57059 783 aa11.99□□□□□ -0.49
SSBP2-202ENST00000504136 ZNF530Q6P9A1 599 aaPredicted RBP11.99□□□□□ -0.49
SSBP2-202ENST00000504136 FLAD1Q8NFF5 587 aa11.99□□□□□ -0.49
SSBP2-202ENST00000504136 ATG3Q9NT62 314 aa11.99□□□□□ -0.49
SSBP2-202ENST00000504136 TFCP2L1Q9NZI6 479 aa11.99□□□□□ -0.49
SSBP2-202ENST00000504136 PPP1R1BQ9UD71 204 aaPredicted RBP11.99□□□□□ -0.49
SSBP2-202ENST00000504136 DIAPH1O60610 1272 aaKnown RBP11.98□□□□□ -0.49
SSBP2-202ENST00000504136 PSEN2P49810 448 aa11.98□□□□□ -0.49
SSBP2-202ENST00000504136 CC2D1BQ5T0F9 858 aaKnown RBP11.98□□□□□ -0.49
SSBP2-202ENST00000504136 ASAP1Q9ULH1 1129 aa11.98□□□□□ -0.49
SSBP2-202ENST00000504136 TJP1Q07157 1748 aa11.97□□□□□ -0.49
SSBP2-202ENST00000504136 COL23A1Q86Y22 540 aaPredicted RBP11.97□□□□□ -0.49
SSBP2-202ENST00000504136 ARXQ96QS3 562 aa11.97□□□□□ -0.49
SSBP2-202ENST00000504136 KCNK17Q96T54 332 aa11.97□□□□□ -0.49
SSBP2-202ENST00000504136 UBR2Q8IWV8 1755 aa11.97□□□□□ -0.49
SSBP2-202ENST00000504136 PTPREP23469 700 aa11.96□□□□□ -0.49
SSBP2-202ENST00000504136 SSFA2P28290 1259 aa11.96□□□□□ -0.49
SSBP2-202ENST00000504136 LSM11P83369 360 aaKnown RBP eCLIP11.96□□□□□ -0.49
SSBP2-202ENST00000504136 ITPK1Q13572 414 aa11.96□□□□□ -0.49
SSBP2-202ENST00000504136 AKAP4Q5JQC9 854 aa11.96□□□□□ -0.49
SSBP2-202ENST00000504136 DMRTA1Q5VZB9 504 aa11.96□□□□□ -0.49
SSBP2-202ENST00000504136 SLC4A9Q96Q91 983 aa11.96□□□□□ -0.49
SSBP2-202ENST00000504136 SYT17Q9BSW7 474 aa11.96□□□□□ -0.49
SSBP2-202ENST00000504136 FHDC1Q9C0D6 1143 aaPredicted RBP11.96□□□□□ -0.49
SSBP2-202ENST00000504136 SIPA1L3O60292 1781 aaPredicted RBP11.96□□□□□ -0.49
SSBP2-202ENST00000504136 C1orf141Q5JVX7 400 aa11.95□□□□□ -0.5
SSBP2-202ENST00000504136 C6orf132Q5T0Z8 1188 aa11.95□□□□□ -0.5
SSBP2-202ENST00000504136 AMIGO3Q86WK7 504 aa11.95□□□□□ -0.5
SSBP2-202ENST00000504136 LINC00116Q8NCU8 138 aa11.95□□□□□ -0.5
SSBP2-202ENST00000504136 MYH14Q7Z406 1995 aaKnown RBP11.95□□□□□ -0.5
SSBP2-202ENST00000504136 CNTNAP4Q9C0A0 1308 aa11.94□□□□□ -0.5
SSBP2-202ENST00000504136 RC3H1Q5TC82 1133 aaKnown RBP11.94□□□□□ -0.5
SSBP2-202ENST00000504136 KCPQ6ZWJ8 1503 aa11.94□□□□□ -0.5
SSBP2-202ENST00000504136 C4AP0C0L4 1744 aa11.94□□□□□ -0.5
SSBP2-202ENST00000504136 CABP4P57796 275 aa11.93□□□□□ -0.5
SSBP2-202ENST00000504136 TSR1Q2NL82 804 aaKnown RBP11.93□□□□□ -0.5
SSBP2-202ENST00000504136 AK7Q96M32 723 aa11.93□□□□□ -0.5
SSBP2-202ENST00000504136 KIF13BQ9NQT8 1826 aa11.93□□□□□ -0.5
SSBP2-202ENST00000504136 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.92□□□□□ -0.5
SSBP2-202ENST00000504136 RNMTO43148 476 aaKnown RBP11.92□□□□□ -0.5
SSBP2-202ENST00000504136 HMOX1P09601 288 aa11.92□□□□□ -0.5
SSBP2-202ENST00000504136 COL9A1P20849 921 aa11.92□□□□□ -0.5
SSBP2-202ENST00000504136 POLD1P28340 1107 aa11.92□□□□□ -0.5
SSBP2-202ENST00000504136 PPP2R1AP30153 589 aa11.92□□□□□ -0.5
SSBP2-202ENST00000504136 ATP6V1AP38606 617 aa11.92□□□□□ -0.5
SSBP2-202ENST00000504136 MTHFSDQ2M296 383 aaKnown RBP11.92□□□□□ -0.5
SSBP2-202ENST00000504136 SLC52A2Q9HAB3 445 aa11.92□□□□□ -0.5
SSBP2-202ENST00000504136 CEMIPQ8WUJ3 1361 aa11.92□□□□□ -0.5
SSBP2-202ENST00000504136 PPP1R3GB7ZBB8 358 aa11.91□□□□□ -0.5
SSBP2-202ENST00000504136 MAP3K7O43318 606 aa11.91□□□□□ -0.5
SSBP2-202ENST00000504136 NFATC2IPQ8NCF5 419 aa11.91□□□□□ -0.5
SSBP2-202ENST00000504136 CHD4Q14839 1912 aa11.9□□□□□ -0.5
SSBP2-202ENST00000504136 RSPH6AQ9H0K4 717 aa11.9□□□□□ -0.5
SSBP2-202ENST00000504136 LGR6Q9HBX8 967 aa11.9□□□□□ -0.5
SSBP2-202ENST00000504136 GNPATO15228 680 aa11.89□□□□□ -0.51
SSBP2-202ENST00000504136 GAS2L2Q8NHY3 880 aa11.89□□□□□ -0.51
SSBP2-202ENST00000504136 CFAP53Q96M91 514 aa11.89□□□□□ -0.51
SSBP2-202ENST00000504136 ZBED2Q9BTP6 218 aa11.89□□□□□ -0.51
SSBP2-202ENST00000504136 SLC4A5Q9BY07 1137 aa11.89□□□□□ -0.51
SSBP2-202ENST00000504136 CDHR5Q9HBB8 845 aa11.89□□□□□ -0.51
SSBP2-202ENST00000504136 KIAA1551Q9HCM1 1747 aa11.89□□□□□ -0.51
SSBP2-202ENST00000504136 TK2O00142 265 aa11.88□□□□□ -0.51
SSBP2-202ENST00000504136 RPS6KA4O75676 772 aa11.88□□□□□ -0.51
SSBP2-202ENST00000504136 RNF166Q96A37 237 aaPredicted RBP11.88□□□□□ -0.51
SSBP2-202ENST00000504136 CD2APQ9Y5K6 639 aa11.88□□□□□ -0.51
SSBP2-202ENST00000504136 FCHSD2O94868 740 aa11.87□□□□□ -0.51
SSBP2-202ENST00000504136 ANKRD13DQ6ZTN6 518 aa11.87□□□□□ -0.51
SSBP2-202ENST00000504136 NUDCQ9Y266 331 aa11.87□□□□□ -0.51
SSBP2-202ENST00000504136 RTCBQ9Y3I0 505 aaKnown RBP11.87□□□□□ -0.51
SSBP2-202ENST00000504136 GNAT3A8MTJ3 354 aa11.86□□□□□ -0.51
SSBP2-202ENST00000504136 U2SURPO15042 1029 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms