RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 NCAPD2Q15021 1401 aa17.98■□□□□ 0.47
SNF8-203ENST00000504000 GDPD2Q9HCC8 539 aa17.97■□□□□ 0.47
SNF8-203ENST00000504000 SNRKQ9NRH2 765 aa17.97■□□□□ 0.47
SNF8-203ENST00000504000 ECHDC1Q9NTX5 307 aa17.97■□□□□ 0.47
SNF8-203ENST00000504000 AKAP4Q5JQC9 854 aa17.97■□□□□ 0.47
SNF8-203ENST00000504000 CWC27Q6UX04 472 aaKnown RBP17.97■□□□□ 0.47
SNF8-203ENST00000504000 DIAPH3Q9NSV4 1193 aa17.97■□□□□ 0.47
SNF8-203ENST00000504000 CHPF2Q9P2E5 772 aa17.97■□□□□ 0.47
SNF8-203ENST00000504000 DBF4Q9UBU7 674 aaPredicted RBP17.97■□□□□ 0.47
SNF8-203ENST00000504000 ADCY9O60503 1353 aa17.96■□□□□ 0.47
SNF8-203ENST00000504000 NFAT5O94916 1531 aa17.96■□□□□ 0.47
SNF8-203ENST00000504000 HIP1O00291 1037 aa17.96■□□□□ 0.47
SNF8-203ENST00000504000 PTMAP06454 111 aaKnown RBP17.96■□□□□ 0.47
SNF8-203ENST00000504000 EVI5LQ96CN4 794 aa17.96■□□□□ 0.47
SNF8-203ENST00000504000 CNPY2Q9Y2B0 182 aa17.96■□□□□ 0.47
SNF8-203ENST00000504000 LTN1O94822 1766 aa17.96■□□□□ 0.46
SNF8-203ENST00000504000 TCHHQ07283 1943 aa17.95■□□□□ 0.46
SNF8-203ENST00000504000 UQCRHLA0A096LP55 91 aa17.95■□□□□ 0.46
SNF8-203ENST00000504000 UQCRHP07919 91 aa17.95■□□□□ 0.46
SNF8-203ENST00000504000 PIBF1Q8WXW3 757 aa17.95■□□□□ 0.46
SNF8-203ENST00000504000 FUCA2Q9BTY2 467 aa17.95■□□□□ 0.46
SNF8-203ENST00000504000 CYP46A1Q9Y6A2 500 aa17.95■□□□□ 0.46
SNF8-203ENST00000504000 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.95■□□□□ 0.46
SNF8-203ENST00000504000 LMTK3Q96Q04 1460 aa17.95■□□□□ 0.46
SNF8-203ENST00000504000 CHD2O14647 1828 aaKnown RBP17.95■□□□□ 0.46
SNF8-203ENST00000504000 HEG1Q9ULI3 1381 aa17.95■□□□□ 0.46
SNF8-203ENST00000504000 MAP4K4O95819 1239 aaPredicted RBP17.95■□□□□ 0.46
SNF8-203ENST00000504000 EIF2S2P20042 333 aaKnown RBP17.95■□□□□ 0.46
SNF8-203ENST00000504000 CASTP20810 708 aaKnown RBP17.95■□□□□ 0.46
SNF8-203ENST00000504000 NECTIN1Q15223 517 aa17.95■□□□□ 0.46
SNF8-203ENST00000504000 AMOTQ4VCS5 1084 aa17.94■□□□□ 0.46
SNF8-203ENST00000504000 ALDH8A1Q9H2A2 487 aaPredicted RBP17.94■□□□□ 0.46
SNF8-203ENST00000504000 PDRG1Q9NUG6 133 aa17.94■□□□□ 0.46
SNF8-203ENST00000504000 MTMR6Q9Y217 621 aa17.94■□□□□ 0.46
SNF8-203ENST00000504000 UTYO14607 1347 aa17.94■□□□□ 0.46
SNF8-203ENST00000504000 KCNH5Q8NCM2 988 aa17.93■□□□□ 0.46
SNF8-203ENST00000504000 PRIMPOLQ96LW4 560 aa17.93■□□□□ 0.46
SNF8-203ENST00000504000 KDM4AO75164 1064 aa17.92■□□□□ 0.46
SNF8-203ENST00000504000 ZKSCAN1P17029 563 aaPredicted RBP17.92■□□□□ 0.46
SNF8-203ENST00000504000 TEFQ10587 303 aa17.92■□□□□ 0.46
SNF8-203ENST00000504000 LTV1Q96GA3 475 aaPredicted RBP17.92■□□□□ 0.46
SNF8-203ENST00000504000 LGR6Q9HBX8 967 aa17.92■□□□□ 0.46
SNF8-203ENST00000504000 SPG7Q9UQ90 795 aa17.92■□□□□ 0.46
SNF8-203ENST00000504000 CCDC171Q6TFL3 1326 aa17.92■□□□□ 0.46
SNF8-203ENST00000504000 BTBD11A6QL63 1104 aa17.92■□□□□ 0.46
SNF8-203ENST00000504000 TPM3P06753 285 aa17.92■□□□□ 0.46
SNF8-203ENST00000504000 GJB2P29033 226 aa17.92■□□□□ 0.46
SNF8-203ENST00000504000 OS9Q13438 667 aaPredicted RBP17.92■□□□□ 0.46
SNF8-203ENST00000504000 PLEKHO1Q53GL0 409 aaPredicted RBP17.92■□□□□ 0.46
SNF8-203ENST00000504000 NBPF6Q5VWK0 638 aa17.92■□□□□ 0.46
SNF8-203ENST00000504000 KSR2Q6VAB6 950 aa17.92■□□□□ 0.46
SNF8-203ENST00000504000 MAP4K1Q92918 833 aa17.92■□□□□ 0.46
SNF8-203ENST00000504000 NBPF4Q96M43 638 aa17.92■□□□□ 0.46
SNF8-203ENST00000504000 ADCY5O95622 1261 aa17.91■□□□□ 0.46
SNF8-203ENST00000504000 HMGN5P82970 282 aaKnown RBP17.91■□□□□ 0.46
SNF8-203ENST00000504000 ELP1O95163 1332 aa17.91■□□□□ 0.46
SNF8-203ENST00000504000 IFIT2P09913 472 aaKnown RBP17.9■□□□□ 0.46
SNF8-203ENST00000504000 KCNA6P17658 529 aa17.9■□□□□ 0.46
SNF8-203ENST00000504000 PSMA5P28066 241 aa17.9■□□□□ 0.46
SNF8-203ENST00000504000 PTH1RQ03431 593 aa17.9■□□□□ 0.46
SNF8-203ENST00000504000 FOXD4L6Q3SYB3 417 aaPredicted RBP17.9■□□□□ 0.46
SNF8-203ENST00000504000 FOXD4L3Q6VB84 417 aaPredicted RBP17.9■□□□□ 0.46
SNF8-203ENST00000504000 JAKMIP1Q96N16 626 aaKnown RBP17.9■□□□□ 0.46
SNF8-203ENST00000504000 SPTLC3Q9NUV7 552 aa17.9■□□□□ 0.46
SNF8-203ENST00000504000 PHF8Q9UPP1 1060 aa17.9■□□□□ 0.46
SNF8-203ENST00000504000 PDCP20941 246 aa17.9■□□□□ 0.46
SNF8-203ENST00000504000 CEBPAP49715 358 aaPredicted RBP17.9■□□□□ 0.46
SNF8-203ENST00000504000 ANKRD1Q15327 319 aa17.9■□□□□ 0.46
SNF8-203ENST00000504000 NUTM2GQ5VZR2 741 aa17.9■□□□□ 0.46
SNF8-203ENST00000504000 USHBP1Q8N6Y0 703 aa17.9■□□□□ 0.46
SNF8-203ENST00000504000 C9orf78Q9NZ63 289 aaPredicted RBP17.9■□□□□ 0.46
SNF8-203ENST00000504000 USP25Q9UHP3 1055 aa17.9■□□□□ 0.46
SNF8-203ENST00000504000 LARGE1O95461 756 aa17.89■□□□□ 0.45
SNF8-203ENST00000504000 HCLS1P14317 486 aaPredicted RBP17.89■□□□□ 0.45
SNF8-203ENST00000504000 MYRIPQ8NFW9 859 aa17.89■□□□□ 0.45
SNF8-203ENST00000504000 LINS1Q8NG48 757 aa17.89■□□□□ 0.45
SNF8-203ENST00000504000 GIGYF1O75420 1035 aaPredicted RBP17.88■□□□□ 0.45
SNF8-203ENST00000504000 GTF2F1P35269 517 aaKnown RBP eCLIP17.88■□□□□ 0.45
SNF8-203ENST00000504000 ADCK5Q3MIX3 580 aa17.88■□□□□ 0.45
SNF8-203ENST00000504000 PRPF40BQ6NWY9 871 aaKnown RBP17.88■□□□□ 0.45
SNF8-203ENST00000504000 CCDC83Q8IWF9 413 aa17.88■□□□□ 0.45
SNF8-203ENST00000504000 MAP3K2Q9Y2U5 619 aa17.88■□□□□ 0.45
SNF8-203ENST00000504000 FIBPO43427 364 aa17.88■□□□□ 0.45
SNF8-203ENST00000504000 NOLC1Q14978 699 aaKnown RBP eCLIP17.88■□□□□ 0.45
SNF8-203ENST00000504000 TSGA10IPQ3SY00 556 aa17.88■□□□□ 0.45
SNF8-203ENST00000504000 VSIG10Q8N0Z9 540 aa17.88■□□□□ 0.45
SNF8-203ENST00000504000 JCADQ9P266 1359 aa17.88■□□□□ 0.45
SNF8-203ENST00000504000 RNMTO43148 476 aaKnown RBP17.87■□□□□ 0.45
SNF8-203ENST00000504000 KCNQ3O43525 872 aa17.87■□□□□ 0.45
SNF8-203ENST00000504000 DNM1Q05193 864 aaKnown RBP17.87■□□□□ 0.45
SNF8-203ENST00000504000 ME3Q16798 604 aa17.87■□□□□ 0.45
SNF8-203ENST00000504000 RNF20Q5VTR2 975 aa17.87■□□□□ 0.45
SNF8-203ENST00000504000 CREB3L3Q68CJ9 461 aa17.87■□□□□ 0.45
SNF8-203ENST00000504000 ZNF530Q6P9A1 599 aaPredicted RBP17.87■□□□□ 0.45
SNF8-203ENST00000504000 ST3GAL1Q11201 340 aa17.86■□□□□ 0.45
SNF8-203ENST00000504000 FAM13BQ9NYF5 915 aa17.86■□□□□ 0.45
SNF8-203ENST00000504000 RBM8AQ9Y5S9 174 aaKnown RBP17.86■□□□□ 0.45
SNF8-203ENST00000504000 GRM8O00222 908 aa17.86■□□□□ 0.45
SNF8-203ENST00000504000 CCDC192P0DO97 292 aa17.86■□□□□ 0.45
SNF8-203ENST00000504000 KRT85P78386 507 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms