RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 NBPF15Q8N660 670 aa29■■■□□ 2.23
LSM6-203ENST00000503982 TSPYL4Q9UJ04 414 aa29■■■□□ 2.23
LSM6-203ENST00000503982 RRP7AQ9Y3A4 280 aaKnown RBP29■■■□□ 2.23
LSM6-203ENST00000503982 COL11A2P13942 1736 aaPredicted RBP29■■■□□ 2.23
LSM6-203ENST00000503982 FAM177BA6PVY3 158 aa28.99■■■□□ 2.23
LSM6-203ENST00000503982 EIF4A1P60842 406 aaKnown RBP28.99■■■□□ 2.23
LSM6-203ENST00000503982 CLEC4GQ6UXB4 293 aa28.99■■■□□ 2.23
LSM6-203ENST00000503982 CCDC146Q8IYE0 955 aa28.99■■■□□ 2.23
LSM6-203ENST00000503982 LMOD3Q0VAK6 560 aa28.98■■■□□ 2.23
LSM6-203ENST00000503982 NEUROD2Q15784 382 aa28.98■■■□□ 2.23
LSM6-203ENST00000503982 NIP7Q9Y221 180 aaKnown RBP eCLIP28.98■■■□□ 2.23
LSM6-203ENST00000503982 KIF3CO14782 793 aa28.97■■■□□ 2.23
LSM6-203ENST00000503982 MYL6BP14649 208 aa28.96■■■□□ 2.23
LSM6-203ENST00000503982 TMPOP42166 694 aaKnown RBP28.95■■■□□ 2.22
LSM6-203ENST00000503982 C16orf71Q8IYS4 520 aaPredicted RBP28.95■■■□□ 2.22
LSM6-203ENST00000503982 NMRK2Q9NPI5 230 aa28.95■■■□□ 2.22
LSM6-203ENST00000503982 GTF2E1P29083 439 aaPredicted RBP28.94■■■□□ 2.22
LSM6-203ENST00000503982 KIF6Q6ZMV9 814 aa28.94■■■□□ 2.22
LSM6-203ENST00000503982 KDM2BQ8NHM5 1336 aa28.94■■■□□ 2.22
LSM6-203ENST00000503982 NUP98P52948 1817 aa28.93■■■□□ 2.22
LSM6-203ENST00000503982 C21orf2O43822 256 aa28.93■■■□□ 2.22
LSM6-203ENST00000503982 HLFQ16534 295 aa28.92■■■□□ 2.22
LSM6-203ENST00000503982 TPTE2Q6XPS3 522 aa28.92■■■□□ 2.22
LSM6-203ENST00000503982 CNKSR1Q969H4 720 aa28.92■■■□□ 2.22
LSM6-203ENST00000503982 LMNB1P20700 586 aa28.91■■■□□ 2.22
LSM6-203ENST00000503982 MASTLQ96GX5 879 aa28.91■■■□□ 2.22
LSM6-203ENST00000503982 LAS1LQ9Y4W2 734 aaKnown RBP28.91■■■□□ 2.22
LSM6-203ENST00000503982 EIF2S2P20042 333 aaKnown RBP28.9■■■□□ 2.22
LSM6-203ENST00000503982 RUNDC1Q96C34 613 aa28.9■■■□□ 2.22
LSM6-203ENST00000503982 TIAM2Q8IVF5 1701 aa28.89■■■□□ 2.22
LSM6-203ENST00000503982 STYK1Q6J9G0 422 aa28.89■■■□□ 2.22
LSM6-203ENST00000503982 SLX4Q8IY92 1834 aa28.89■■■□□ 2.22
LSM6-203ENST00000503982 HSPA6P17066 643 aa28.88■■■□□ 2.21
LSM6-203ENST00000503982 ZBTB3Q9H5J0 574 aa28.88■■■□□ 2.21
LSM6-203ENST00000503982 ARFGEF2Q9Y6D5 1785 aa28.88■■■□□ 2.21
LSM6-203ENST00000503982 RGL2O15211 777 aa28.87■■■□□ 2.21
LSM6-203ENST00000503982 SRGNP10124 158 aa28.87■■■□□ 2.21
LSM6-203ENST00000503982 MAP3K15Q6ZN16 1313 aa28.87■■■□□ 2.21
LSM6-203ENST00000503982 TNRC6CQ9HCJ0 1690 aaKnown RBP28.86■■■□□ 2.21
LSM6-203ENST00000503982 TOMM70O94826 608 aa28.86■■■□□ 2.21
LSM6-203ENST00000503982 TTLL7Q6ZT98 887 aa28.86■■■□□ 2.21
LSM6-203ENST00000503982 PRKRIP1Q9H875 184 aaPredicted RBP28.86■■■□□ 2.21
LSM6-203ENST00000503982 RRAGCQ9HB90 399 aa28.86■■■□□ 2.21
LSM6-203ENST00000503982 FER1L6Q2WGJ9 1857 aa28.85■■■□□ 2.21
LSM6-203ENST00000503982 NFKBIEO00221 500 aa28.85■■■□□ 2.21
LSM6-203ENST00000503982 PRPF40BQ6NWY9 871 aaKnown RBP28.85■■■□□ 2.21
LSM6-203ENST00000503982 NYXQ9GZU5 481 aa28.85■■■□□ 2.21
LSM6-203ENST00000503982 ADAMTS8Q9UP79 889 aa28.85■■■□□ 2.21
LSM6-203ENST00000503982 ERVV-1B6SEH8 477 aa28.84■■■□□ 2.21
LSM6-203ENST00000503982 GPTP24298 496 aa28.84■■■□□ 2.21
LSM6-203ENST00000503982 NECTIN2Q92692 538 aa28.84■■■□□ 2.21
LSM6-203ENST00000503982 BABAM1Q9NWV8 329 aa28.84■■■□□ 2.21
LSM6-203ENST00000503982 ERBB4Q15303 1308 aa28.84■■■□□ 2.21
LSM6-203ENST00000503982 NPR1P16066 1061 aa28.83■■■□□ 2.21
LSM6-203ENST00000503982 ZC3H4Q9UPT8 1303 aaKnown RBP28.83■■■□□ 2.21
LSM6-203ENST00000503982 DICER1Q9UPY3 1922 aaKnown RBP28.82■■■□□ 2.2
LSM6-203ENST00000503982 SOGA3Q5TF21 947 aa28.82■■■□□ 2.2
LSM6-203ENST00000503982 PRELPP51888 382 aa28.81■■■□□ 2.2
LSM6-203ENST00000503982 TAOK3Q9H2K8 898 aa28.81■■■□□ 2.2
LSM6-203ENST00000503982 NUTM1Q86Y26 1132 aa28.8■■■□□ 2.2
LSM6-203ENST00000503982 ANXA1P04083 346 aa28.79■■■□□ 2.2
LSM6-203ENST00000503982 ERFEQ4G0M1 354 aa28.79■■■□□ 2.2
LSM6-203ENST00000503982 ZNF316A6NFI3 1004 aaPredicted RBP28.78■■■□□ 2.2
LSM6-203ENST00000503982 GLTPD2A6NH11 291 aa28.77■■■□□ 2.2
LSM6-203ENST00000503982 CCDC93Q567U6 631 aa28.77■■■□□ 2.2
LSM6-203ENST00000503982 RBM46Q8TBY0 533 aaKnown RBP28.77■■■□□ 2.2
LSM6-203ENST00000503982 TRIM35Q9UPQ4 493 aa28.77■■■□□ 2.2
LSM6-203ENST00000503982 AIMP1Q12904 312 aaKnown RBP28.76■■■□□ 2.19
LSM6-203ENST00000503982 DPY19L2Q6NUT2 758 aa28.76■■■□□ 2.19
LSM6-203ENST00000503982 GIGYF2Q6Y7W6 1299 aaKnown RBP28.76■■■□□ 2.19
LSM6-203ENST00000503982 ALDH1B1P30837 517 aa28.75■■■□□ 2.19
LSM6-203ENST00000503982 ABCC12Q96J65 1359 aa28.75■■■□□ 2.19
LSM6-203ENST00000503982 PROSER3Q2NL68 480 aa28.74■■■□□ 2.19
LSM6-203ENST00000503982 PPP1R42Q7Z4L9 355 aa28.74■■■□□ 2.19
LSM6-203ENST00000503982 RPGRQ92834 1020 aaKnown RBP28.74■■■□□ 2.19
LSM6-203ENST00000503982 UBN2Q6ZU65 1347 aa28.73■■■□□ 2.19
LSM6-203ENST00000503982 LTBP3Q9NS15 1303 aa28.73■■■□□ 2.19
LSM6-203ENST00000503982 APLP1P51693 650 aa28.73■■■□□ 2.19
LSM6-203ENST00000503982 KRT24Q2M2I5 525 aa28.73■■■□□ 2.19
LSM6-203ENST00000503982 SUSD4Q5VX71 490 aa28.73■■■□□ 2.19
LSM6-203ENST00000503982 KLRG2A4D1S0 409 aaPredicted RBP28.72■■■□□ 2.19
LSM6-203ENST00000503982 CHL1O00533 1208 aa28.72■■■□□ 2.19
LSM6-203ENST00000503982 VEGFAP15692 232 aaPredicted RBP28.72■■■□□ 2.19
LSM6-203ENST00000503982 PDIA6Q15084 440 aa28.72■■■□□ 2.19
LSM6-203ENST00000503982 COPS6Q7L5N1 327 aa28.71■■■□□ 2.19
LSM6-203ENST00000503982 ZNF34Q8IZ26 560 aa28.71■■■□□ 2.19
LSM6-203ENST00000503982 ANKRD36CQ5JPF3 1778 aa28.7■■■□□ 2.19
LSM6-203ENST00000503982 PARP10Q53GL7 1025 aa28.7■■■□□ 2.18
LSM6-203ENST00000503982 XAGE3Q8WTP9 111 aa28.7■■■□□ 2.18
LSM6-203ENST00000503982 APAF1O14727 1248 aa28.69■■■□□ 2.18
LSM6-203ENST00000503982 FSTL1Q12841 308 aa28.69■■■□□ 2.18
LSM6-203ENST00000503982 HDGFL1Q5TGJ6 251 aa28.69■■■□□ 2.18
LSM6-203ENST00000503982 OLFM4Q6UX06 510 aa28.69■■■□□ 2.18
LSM6-203ENST00000503982 IBTKQ9P2D0 1353 aaPredicted RBP28.69■■■□□ 2.18
LSM6-203ENST00000503982 FKBP4Q02790 459 aaKnown RBP eCLIP28.68■■■□□ 2.18
LSM6-203ENST00000503982 RTKN2Q8IZC4 609 aa28.68■■■□□ 2.18
LSM6-203ENST00000503982 DDX21Q9NR30 783 aaKnown RBP eCLIP28.68■■■□□ 2.18
LSM6-203ENST00000503982 CEP350Q5VT06 3117 aa28.67■■■□□ 2.18
LSM6-203ENST00000503982 NTSR2O95665 410 aa28.67■■■□□ 2.18
LSM6-203ENST00000503982 HSP90AB3PQ58FF7 597 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms