RNA–Protein interactions for RNA: ENST00000503884.5

PROM1-204, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-204ENST00000503884 BTBD11A6QL63 1104 aa12.06□□□□□ -0.48
PROM1-204ENST00000503884 POTECB2RU33 542 aa12.06□□□□□ -0.48
PROM1-204ENST00000503884 PDE6BP35913 854 aa12.06□□□□□ -0.48
PROM1-204ENST00000503884 HTRA3P83110 453 aa12.06□□□□□ -0.48
PROM1-204ENST00000503884 KLRG1Q96E93 195 aa12.06□□□□□ -0.48
PROM1-204ENST00000503884 PRAMEF22A3QJZ6 481 aa12.05□□□□□ -0.48
PROM1-204ENST00000503884 PPP2R1AP30153 589 aa12.05□□□□□ -0.48
PROM1-204ENST00000503884 CNGB1Q14028 1251 aaPredicted RBP12.05□□□□□ -0.48
PROM1-204ENST00000503884 CFAP53Q96M91 514 aa12.05□□□□□ -0.48
PROM1-204ENST00000503884 SPINK5Q9NQ38 1064 aaPredicted RBP12.05□□□□□ -0.48
PROM1-204ENST00000503884 LTBP3Q9NS15 1303 aa12.05□□□□□ -0.48
PROM1-204ENST00000503884 LAMB4A4D0S4 1761 aa12.05□□□□□ -0.48
PROM1-204ENST00000503884 RGL2O15211 777 aa12.04□□□□□ -0.48
PROM1-204ENST00000503884 C21orf2O43822 256 aa12.04□□□□□ -0.48
PROM1-204ENST00000503884 SRGNP10124 158 aa12.04□□□□□ -0.48
PROM1-204ENST00000503884 VEGFAP15692 232 aaPredicted RBP12.04□□□□□ -0.48
PROM1-204ENST00000503884 SAMD1Q6SPF0 538 aaPredicted RBP12.04□□□□□ -0.48
PROM1-204ENST00000503884 CLEC4GQ6UXB4 293 aa12.04□□□□□ -0.48
PROM1-204ENST00000503884 DZIP3Q86Y13 1208 aaKnown RBP12.04□□□□□ -0.48
PROM1-204ENST00000503884 CCDC24Q8N4L8 307 aa12.04□□□□□ -0.48
PROM1-204ENST00000503884 SMC1BQ8NDV3 1235 aa12.04□□□□□ -0.48
PROM1-204ENST00000503884 SETDB2Q96T68 719 aa12.04□□□□□ -0.48
PROM1-204ENST00000503884 KDM3BQ7LBC6 1761 aa12.04□□□□□ -0.48
PROM1-204ENST00000503884 KLRG2A4D1S0 409 aaPredicted RBP12.03□□□□□ -0.48
PROM1-204ENST00000503884 NBPF26B4DH59 902 aa12.03□□□□□ -0.48
PROM1-204ENST00000503884 HTATSF1O43719 755 aaKnown RBP12.03□□□□□ -0.48
PROM1-204ENST00000503884 SNRPA1P09661 255 aaKnown RBP12.03□□□□□ -0.48
PROM1-204ENST00000503884 STYK1Q6J9G0 422 aa12.03□□□□□ -0.48
PROM1-204ENST00000503884 NBPF10Q6P3W6 841 aaKnown RBP12.03□□□□□ -0.48
PROM1-204ENST00000503884 MCM10Q7L590 875 aa12.03□□□□□ -0.48
PROM1-204ENST00000503884 NBPF15Q8N660 670 aa12.03□□□□□ -0.48
PROM1-204ENST00000503884 CNBD1Q8NA66 436 aa12.03□□□□□ -0.48
PROM1-204ENST00000503884 ZNF622Q969S3 477 aaKnown RBP eCLIP12.03□□□□□ -0.48
PROM1-204ENST00000503884 NUDCQ9Y266 331 aa12.03□□□□□ -0.48
PROM1-204ENST00000503884 ZNF330Q9Y3S2 320 aaPredicted RBP12.03□□□□□ -0.48
PROM1-204ENST00000503884 U2AF1L5P0DN76 240 aaPredicted RBP12.02□□□□□ -0.49
PROM1-204ENST00000503884 PIP4K2AP48426 406 aaPredicted RBP12.02□□□□□ -0.49
PROM1-204ENST00000503884 U2AF1Q01081 240 aaKnown RBP eCLIP12.02□□□□□ -0.49
PROM1-204ENST00000503884 C7orf43Q8WVR3 580 aa12.02□□□□□ -0.49
PROM1-204ENST00000503884 DCTN1Q14203 1278 aa12.01□□□□□ -0.49
PROM1-204ENST00000503884 PRPF40BQ6NWY9 871 aaKnown RBP12.01□□□□□ -0.49
PROM1-204ENST00000503884 CNKSR1Q969H4 720 aa12.01□□□□□ -0.49
PROM1-204ENST00000503884 MASTLQ96GX5 879 aa12.01□□□□□ -0.49
PROM1-204ENST00000503884 NUP98P52948 1817 aa12.01□□□□□ -0.49
PROM1-204ENST00000503884 SCN4AP35499 1836 aa12□□□□□ -0.49
PROM1-204ENST00000503884 ST5P78524 1137 aa12□□□□□ -0.49
PROM1-204ENST00000503884 ERFEQ4G0M1 354 aa12□□□□□ -0.49
PROM1-204ENST00000503884 NPM2Q86SE8 214 aaKnown RBP12□□□□□ -0.49
PROM1-204ENST00000503884 RTF1Q92541 710 aaKnown RBP12□□□□□ -0.49
PROM1-204ENST00000503884 TAOK3Q9H2K8 898 aa12□□□□□ -0.49
PROM1-204ENST00000503884 CAPN15O75808 1086 aa11.99□□□□□ -0.49
PROM1-204ENST00000503884 TAF7Q15545 349 aaPredicted RBP11.99□□□□□ -0.49
PROM1-204ENST00000503884 SOGA3Q5TF21 947 aa11.99□□□□□ -0.49
PROM1-204ENST00000503884 DPY19L2Q6NUT2 758 aa11.99□□□□□ -0.49
PROM1-204ENST00000503884 ZNF219Q9P2Y4 722 aaPredicted RBP11.99□□□□□ -0.49
PROM1-204ENST00000503884 SNED1Q8TER0 1413 aa11.99□□□□□ -0.49
PROM1-204ENST00000503884 NBPF5PQ86XG9 351 aaPredicted RBP11.98□□□□□ -0.49
PROM1-204ENST00000503884 ZNF652Q9Y2D9 606 aa11.98□□□□□ -0.49
PROM1-204ENST00000503884 DDNO94850 711 aaPredicted RBP11.97□□□□□ -0.49
PROM1-204ENST00000503884 NPR1P16066 1061 aa11.97□□□□□ -0.49
PROM1-204ENST00000503884 HLFQ16534 295 aa11.97□□□□□ -0.49
PROM1-204ENST00000503884 PLEKHF1Q96S99 279 aa11.97□□□□□ -0.49
PROM1-204ENST00000503884 ADAMTSL1Q8N6G6 1762 aa11.97□□□□□ -0.49
PROM1-204ENST00000503884 COL13A1Q5TAT6 717 aaPredicted RBP11.96□□□□□ -0.49
PROM1-204ENST00000503884 TPTE2Q6XPS3 522 aa11.96□□□□□ -0.49
PROM1-204ENST00000503884 L3MBTL3Q96JM7 780 aaPredicted RBP11.96□□□□□ -0.49
PROM1-204ENST00000503884 MIS18AQ9NYP9 233 aa11.96□□□□□ -0.49
PROM1-204ENST00000503884 NIP7Q9Y221 180 aaKnown RBP eCLIP11.96□□□□□ -0.49
PROM1-204ENST00000503884 NPHP1O15259 732 aa11.95□□□□□ -0.5
PROM1-204ENST00000503884 POTEIP0CG38 1075 aa11.95□□□□□ -0.5
PROM1-204ENST00000503884 POTEJP0CG39 1038 aa11.95□□□□□ -0.5
PROM1-204ENST00000503884 EIF4A1P60842 406 aaKnown RBP11.95□□□□□ -0.5
PROM1-204ENST00000503884 FKBP4Q02790 459 aaKnown RBP eCLIP11.95□□□□□ -0.5
PROM1-204ENST00000503884 CCDC93Q567U6 631 aa11.95□□□□□ -0.5
PROM1-204ENST00000503884 PNISRQ8TF01 805 aaKnown RBP11.95□□□□□ -0.5
PROM1-204ENST00000503884 RIC1Q4ADV7 1423 aa11.94□□□□□ -0.5
PROM1-204ENST00000503884 PASKQ96RG2 1323 aa11.94□□□□□ -0.5
PROM1-204ENST00000503884 ERVV-1B6SEH8 477 aa11.94□□□□□ -0.5
PROM1-204ENST00000503884 CRY2Q49AN0 593 aa11.94□□□□□ -0.5
PROM1-204ENST00000503884 CHADLQ6NUI6 762 aa11.94□□□□□ -0.5
PROM1-204ENST00000503884 OLFM4Q6UX06 510 aa11.94□□□□□ -0.5
PROM1-204ENST00000503884 ABCC12Q96J65 1359 aa11.93□□□□□ -0.5
PROM1-204ENST00000503884 IBTKQ9P2D0 1353 aaPredicted RBP11.93□□□□□ -0.5
PROM1-204ENST00000503884 NFE2L2Q16236 605 aa11.93□□□□□ -0.5
PROM1-204ENST00000503884 MAP3K15Q6ZN16 1313 aa11.92□□□□□ -0.5
PROM1-204ENST00000503884 ZNF541Q9H0D2 1346 aa11.92□□□□□ -0.5
PROM1-204ENST00000503884 COL4A5P29400 1685 aa11.92□□□□□ -0.5
PROM1-204ENST00000503884 IQCA1LA6NCM1 817 aa11.92□□□□□ -0.5
PROM1-204ENST00000503884 FZD9O00144 591 aa11.92□□□□□ -0.5
PROM1-204ENST00000503884 ALDH1B1P30837 517 aa11.92□□□□□ -0.5
PROM1-204ENST00000503884 TTLL7Q6ZT98 887 aa11.92□□□□□ -0.5
PROM1-204ENST00000503884 LRP10Q7Z4F1 713 aa11.92□□□□□ -0.5
PROM1-204ENST00000503884 RTKN2Q8IZC4 609 aa11.92□□□□□ -0.5
PROM1-204ENST00000503884 TAF1DQ9H5J8 278 aaPredicted RBP11.92□□□□□ -0.5
PROM1-204ENST00000503884 ZNF277Q9NRM2 450 aaPredicted RBP11.92□□□□□ -0.5
PROM1-204ENST00000503884 CREBZFQ9NS37 354 aa11.92□□□□□ -0.5
PROM1-204ENST00000503884 ERBB4Q15303 1308 aa11.91□□□□□ -0.5
PROM1-204ENST00000503884 UBN2Q6ZU65 1347 aa11.91□□□□□ -0.5
PROM1-204ENST00000503884 FAM177BA6PVY3 158 aa11.91□□□□□ -0.5
PROM1-204ENST00000503884 ITGBL1O95965 494 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms