RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 KIF3CO14782 793 aa25.58■■□□□ 1.69
UBE2D3-215ENST00000503418 TMPOP42166 694 aaKnown RBP25.58■■□□□ 1.69
UBE2D3-215ENST00000503418 WDR43Q15061 677 aaKnown RBP eCLIP25.58■■□□□ 1.69
UBE2D3-215ENST00000503418 NBPF5PQ86XG9 351 aaPredicted RBP25.58■■□□□ 1.69
UBE2D3-215ENST00000503418 CACNA1SQ13698 1873 aa25.57■■□□□ 1.68
UBE2D3-215ENST00000503418 LMOD3Q0VAK6 560 aa25.57■■□□□ 1.68
UBE2D3-215ENST00000503418 NIP7Q9Y221 180 aaKnown RBP eCLIP25.57■■□□□ 1.68
UBE2D3-215ENST00000503418 RRP7AQ9Y3A4 280 aaKnown RBP25.57■■□□□ 1.68
UBE2D3-215ENST00000503418 NEUROD2Q15784 382 aa25.55■■□□□ 1.68
UBE2D3-215ENST00000503418 ZNF219Q9P2Y4 722 aaPredicted RBP25.55■■□□□ 1.68
UBE2D3-215ENST00000503418 CCDC88AQ3V6T2 1871 aa25.54■■□□□ 1.68
UBE2D3-215ENST00000503418 FAM177BA6PVY3 158 aa25.54■■□□□ 1.68
UBE2D3-215ENST00000503418 MYL6BP14649 208 aa25.54■■□□□ 1.68
UBE2D3-215ENST00000503418 HLFQ16534 295 aa25.54■■□□□ 1.68
UBE2D3-215ENST00000503418 NMRK2Q9NPI5 230 aa25.54■■□□□ 1.68
UBE2D3-215ENST00000503418 PRKRIP1Q9H875 184 aaPredicted RBP25.53■■□□□ 1.68
UBE2D3-215ENST00000503418 NUP98P52948 1817 aa25.52■■□□□ 1.68
UBE2D3-215ENST00000503418 RGL2O15211 777 aa25.52■■□□□ 1.68
UBE2D3-215ENST00000503418 RUNDC1Q96C34 613 aa25.52■■□□□ 1.68
UBE2D3-215ENST00000503418 C21orf2O43822 256 aa25.51■■□□□ 1.67
UBE2D3-215ENST00000503418 LMNB1P20700 586 aa25.51■■□□□ 1.67
UBE2D3-215ENST00000503418 TPTE2Q6XPS3 522 aa25.51■■□□□ 1.67
UBE2D3-215ENST00000503418 KIF6Q6ZMV9 814 aa25.51■■□□□ 1.67
UBE2D3-215ENST00000503418 SRGNP10124 158 aa25.5■■□□□ 1.67
UBE2D3-215ENST00000503418 STYK1Q6J9G0 422 aa25.5■■□□□ 1.67
UBE2D3-215ENST00000503418 MAP3K15Q6ZN16 1313 aa25.5■■□□□ 1.67
UBE2D3-215ENST00000503418 SLX4Q8IY92 1834 aa25.5■■□□□ 1.67
UBE2D3-215ENST00000503418 KDM2BQ8NHM5 1336 aa25.5■■□□□ 1.67
UBE2D3-215ENST00000503418 CNKSR1Q969H4 720 aa25.5■■□□□ 1.67
UBE2D3-215ENST00000503418 MASTLQ96GX5 879 aa25.5■■□□□ 1.67
UBE2D3-215ENST00000503418 ADAMTS8Q9UP79 889 aa25.5■■□□□ 1.67
UBE2D3-215ENST00000503418 ARFGEF2Q9Y6D5 1785 aa25.49■■□□□ 1.67
UBE2D3-215ENST00000503418 TIAM2Q8IVF5 1701 aa25.49■■□□□ 1.67
UBE2D3-215ENST00000503418 NFKBIEO00221 500 aa25.49■■□□□ 1.67
UBE2D3-215ENST00000503418 PRELPP51888 382 aa25.49■■□□□ 1.67
UBE2D3-215ENST00000503418 TTLL7Q6ZT98 887 aa25.49■■□□□ 1.67
UBE2D3-215ENST00000503418 ERVV-1B6SEH8 477 aa25.48■■□□□ 1.67
UBE2D3-215ENST00000503418 EIF2S2P20042 333 aaKnown RBP25.48■■□□□ 1.67
UBE2D3-215ENST00000503418 GTF2E1P29083 439 aaPredicted RBP25.48■■□□□ 1.67
UBE2D3-215ENST00000503418 ZBTB3Q9H5J0 574 aa25.48■■□□□ 1.67
UBE2D3-215ENST00000503418 BABAM1Q9NWV8 329 aa25.48■■□□□ 1.67
UBE2D3-215ENST00000503418 FER1L6Q2WGJ9 1857 aa25.47■■□□□ 1.67
UBE2D3-215ENST00000503418 ERBB4Q15303 1308 aa25.47■■□□□ 1.67
UBE2D3-215ENST00000503418 PRPF40BQ6NWY9 871 aaKnown RBP25.47■■□□□ 1.67
UBE2D3-215ENST00000503418 TNRC6CQ9HCJ0 1690 aaKnown RBP25.46■■□□□ 1.67
UBE2D3-215ENST00000503418 TOMM70O94826 608 aa25.46■■□□□ 1.67
UBE2D3-215ENST00000503418 HSPA6P17066 643 aa25.46■■□□□ 1.67
UBE2D3-215ENST00000503418 LAS1LQ9Y4W2 734 aaKnown RBP25.46■■□□□ 1.67
UBE2D3-215ENST00000503418 ZC3H4Q9UPT8 1303 aaKnown RBP25.45■■□□□ 1.66
UBE2D3-215ENST00000503418 C16orf71Q8IYS4 520 aaPredicted RBP25.45■■□□□ 1.66
UBE2D3-215ENST00000503418 TRIM35Q9UPQ4 493 aa25.45■■□□□ 1.66
UBE2D3-215ENST00000503418 NPR1P16066 1061 aa25.44■■□□□ 1.66
UBE2D3-215ENST00000503418 GPTP24298 496 aa25.43■■□□□ 1.66
UBE2D3-215ENST00000503418 NECTIN2Q92692 538 aa25.43■■□□□ 1.66
UBE2D3-215ENST00000503418 NYXQ9GZU5 481 aa25.43■■□□□ 1.66
UBE2D3-215ENST00000503418 RRAGCQ9HB90 399 aa25.43■■□□□ 1.66
UBE2D3-215ENST00000503418 DICER1Q9UPY3 1922 aaKnown RBP25.42■■□□□ 1.66
UBE2D3-215ENST00000503418 ANXA1P04083 346 aa25.42■■□□□ 1.66
UBE2D3-215ENST00000503418 NUTM1Q86Y26 1132 aa25.42■■□□□ 1.66
UBE2D3-215ENST00000503418 TAOK3Q9H2K8 898 aa25.42■■□□□ 1.66
UBE2D3-215ENST00000503418 KLRG2A4D1S0 409 aaPredicted RBP25.41■■□□□ 1.66
UBE2D3-215ENST00000503418 PROSER3Q2NL68 480 aa25.41■■□□□ 1.66
UBE2D3-215ENST00000503418 SOGA3Q5TF21 947 aa25.41■■□□□ 1.66
UBE2D3-215ENST00000503418 ABCC12Q96J65 1359 aa25.41■■□□□ 1.66
UBE2D3-215ENST00000503418 UBN2Q6ZU65 1347 aa25.4■■□□□ 1.66
UBE2D3-215ENST00000503418 CHL1O00533 1208 aa25.4■■□□□ 1.66
UBE2D3-215ENST00000503418 PDIA6Q15084 440 aa25.4■■□□□ 1.66
UBE2D3-215ENST00000503418 KRT24Q2M2I5 525 aa25.4■■□□□ 1.66
UBE2D3-215ENST00000503418 GIGYF2Q6Y7W6 1299 aaKnown RBP25.4■■□□□ 1.66
UBE2D3-215ENST00000503418 GLTPD2A6NH11 291 aa25.39■■□□□ 1.66
UBE2D3-215ENST00000503418 ZEB1P37275 1124 aaPredicted RBP25.39■■□□□ 1.66
UBE2D3-215ENST00000503418 ERFEQ4G0M1 354 aa25.39■■□□□ 1.66
UBE2D3-215ENST00000503418 LRP10Q7Z4F1 713 aa25.39■■□□□ 1.66
UBE2D3-215ENST00000503418 CEP350Q5VT06 3117 aa25.39■■□□□ 1.66
UBE2D3-215ENST00000503418 LTBP3Q9NS15 1303 aa25.38■■□□□ 1.65
UBE2D3-215ENST00000503418 RBM46Q8TBY0 533 aaKnown RBP25.38■■□□□ 1.65
UBE2D3-215ENST00000503418 IBTKQ9P2D0 1353 aaPredicted RBP25.37■■□□□ 1.65
UBE2D3-215ENST00000503418 CCDC93Q567U6 631 aa25.37■■□□□ 1.65
UBE2D3-215ENST00000503418 SUSD4Q5VX71 490 aa25.37■■□□□ 1.65
UBE2D3-215ENST00000503418 ZNF34Q8IZ26 560 aa25.37■■□□□ 1.65
UBE2D3-215ENST00000503418 AIMP1Q12904 312 aaKnown RBP25.36■■□□□ 1.65
UBE2D3-215ENST00000503418 C7orf43Q8WVR3 580 aa25.36■■□□□ 1.65
UBE2D3-215ENST00000503418 ALDH1B1P30837 517 aa25.35■■□□□ 1.65
UBE2D3-215ENST00000503418 APAF1O14727 1248 aa25.34■■□□□ 1.65
UBE2D3-215ENST00000503418 DPY19L2Q6NUT2 758 aa25.34■■□□□ 1.65
UBE2D3-215ENST00000503418 OLFM4Q6UX06 510 aa25.34■■□□□ 1.65
UBE2D3-215ENST00000503418 COPS6Q7L5N1 327 aa25.34■■□□□ 1.65
UBE2D3-215ENST00000503418 PPP1R42Q7Z4L9 355 aa25.34■■□□□ 1.65
UBE2D3-215ENST00000503418 XAGE3Q8WTP9 111 aa25.34■■□□□ 1.65
UBE2D3-215ENST00000503418 ANKRD36CQ5JPF3 1778 aa25.33■■□□□ 1.65
UBE2D3-215ENST00000503418 NTSR2O95665 410 aa25.33■■□□□ 1.65
UBE2D3-215ENST00000503418 CRY2Q49AN0 593 aa25.33■■□□□ 1.65
UBE2D3-215ENST00000503418 PARP10Q53GL7 1025 aa25.33■■□□□ 1.65
UBE2D3-215ENST00000503418 RPGRQ92834 1020 aaKnown RBP25.33■■□□□ 1.65
UBE2D3-215ENST00000503418 CFAP44Q96MT7 982 aa25.33■■□□□ 1.65
UBE2D3-215ENST00000503418 RIC1Q4ADV7 1423 aa25.32■■□□□ 1.64
UBE2D3-215ENST00000503418 VEGFAP15692 232 aaPredicted RBP25.32■■□□□ 1.64
UBE2D3-215ENST00000503418 HDGFL1Q5TGJ6 251 aa25.32■■□□□ 1.64
UBE2D3-215ENST00000503418 DDX21Q9NR30 783 aaKnown RBP eCLIP25.32■■□□□ 1.64
UBE2D3-215ENST00000503418 CHPF2Q9P2E5 772 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms