RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 FANCIQ9NVI1 1328 aa23.59■■□□□ 1.37
PDLIM7-209ENST00000503346 ELL2O00472 640 aaPredicted RBP23.59■■□□□ 1.37
PDLIM7-209ENST00000503346 ANXA1P04083 346 aa23.59■■□□□ 1.37
PDLIM7-209ENST00000503346 SERPINB2P05120 415 aa23.59■■□□□ 1.37
PDLIM7-209ENST00000503346 DBF4Q9UBU7 674 aaPredicted RBP23.59■■□□□ 1.37
PDLIM7-209ENST00000503346 CARMIL3Q8ND23 1372 aa23.58■■□□□ 1.37
PDLIM7-209ENST00000503346 HLFQ16534 295 aa23.58■■□□□ 1.37
PDLIM7-209ENST00000503346 TSPYL6Q8N831 410 aa23.58■■□□□ 1.37
PDLIM7-209ENST00000503346 SETDB2Q96T68 719 aa23.58■■□□□ 1.37
PDLIM7-209ENST00000503346 CHMP4AQ9BY43 222 aa23.58■■□□□ 1.37
PDLIM7-209ENST00000503346 SPINK5Q9NQ38 1064 aaPredicted RBP23.58■■□□□ 1.37
PDLIM7-209ENST00000503346 TGFB2P61812 414 aa23.57■■□□□ 1.36
PDLIM7-209ENST00000503346 MYH16Q9H6N6 1097 aa23.56■■□□□ 1.36
PDLIM7-209ENST00000503346 DCAF8L1A6NGE4 600 aa23.55■■□□□ 1.36
PDLIM7-209ENST00000503346 GOLGA2Q08379 1002 aa23.55■■□□□ 1.36
PDLIM7-209ENST00000503346 COPS6Q7L5N1 327 aa23.55■■□□□ 1.36
PDLIM7-209ENST00000503346 XAGE3Q8WTP9 111 aa23.55■■□□□ 1.36
PDLIM7-209ENST00000503346 ZBTB3Q9H5J0 574 aa23.55■■□□□ 1.36
PDLIM7-209ENST00000503346 HYPKQ9NX55 129 aa23.55■■□□□ 1.36
PDLIM7-209ENST00000503346 NRXN2Q9P2S2 1712 aa23.54■■□□□ 1.36
PDLIM7-209ENST00000503346 ATP10DQ9P241 1426 aa23.54■■□□□ 1.36
PDLIM7-209ENST00000503346 TWISTNBQ3B726 338 aaPredicted RBP23.54■■□□□ 1.36
PDLIM7-209ENST00000503346 CCDC30Q5VVM6 783 aa23.54■■□□□ 1.36
PDLIM7-209ENST00000503346 NIP7Q9Y221 180 aaKnown RBP eCLIP23.54■■□□□ 1.36
PDLIM7-209ENST00000503346 PXDNLA1KZ92 1463 aa23.54■■□□□ 1.36
PDLIM7-209ENST00000503346 KIF13BQ9NQT8 1826 aa23.54■■□□□ 1.36
PDLIM7-209ENST00000503346 GIGYF2Q6Y7W6 1299 aaKnown RBP23.53■■□□□ 1.36
PDLIM7-209ENST00000503346 AIMP1Q12904 312 aaKnown RBP23.52■■□□□ 1.36
PDLIM7-209ENST00000503346 PRR5LQ6MZQ0 368 aa23.52■■□□□ 1.36
PDLIM7-209ENST00000503346 EXOSC9Q06265 439 aaKnown RBP23.5■■□□□ 1.35
PDLIM7-209ENST00000503346 CNBD1Q8NA66 436 aa23.5■■□□□ 1.35
PDLIM7-209ENST00000503346 A0A0G2JLW4 131 aa23.49■■□□□ 1.35
PDLIM7-209ENST00000503346 E9PSI1 815 aa23.49■■□□□ 1.35
PDLIM7-209ENST00000503346 DPEP1P16444 411 aa23.49■■□□□ 1.35
PDLIM7-209ENST00000503346 GPR162Q16538 588 aa23.49■■□□□ 1.35
PDLIM7-209ENST00000503346 NBPF5PQ86XG9 351 aaPredicted RBP23.49■■□□□ 1.35
PDLIM7-209ENST00000503346 ZNF34Q8IZ26 560 aa23.49■■□□□ 1.35
PDLIM7-209ENST00000503346 AFDNP55196 1824 aaKnown RBP23.48■■□□□ 1.35
PDLIM7-209ENST00000503346 VAMP4O75379 141 aa23.48■■□□□ 1.35
PDLIM7-209ENST00000503346 PLBD2Q8NHP8 589 aa23.48■■□□□ 1.35
PDLIM7-209ENST00000503346 BRIP1Q9BX63 1249 aa23.48■■□□□ 1.35
PDLIM7-209ENST00000503346 KIAA1551Q9HCM1 1747 aa23.47■■□□□ 1.35
PDLIM7-209ENST00000503346 KCNA3P22001 575 aa23.47■■□□□ 1.35
PDLIM7-209ENST00000503346 ST5P78524 1137 aa23.47■■□□□ 1.35
PDLIM7-209ENST00000503346 HSP90AB3PQ58FF7 597 aa23.47■■□□□ 1.35
PDLIM7-209ENST00000503346 TPTE2Q6XPS3 522 aa23.47■■□□□ 1.35
PDLIM7-209ENST00000503346 ANKRD13DQ6ZTN6 518 aa23.47■■□□□ 1.35
PDLIM7-209ENST00000503346 UBN2Q6ZU65 1347 aa23.47■■□□□ 1.35
PDLIM7-209ENST00000503346 YBX3P16989 372 aaKnown RBP eCLIP23.46■■□□□ 1.35
PDLIM7-209ENST00000503346 GPTP24298 496 aa23.46■■□□□ 1.35
PDLIM7-209ENST00000503346 SLFN5Q08AF3 891 aa23.46■■□□□ 1.35
PDLIM7-209ENST00000503346 PELP1Q8IZL8 1130 aaKnown RBP23.46■■□□□ 1.35
PDLIM7-209ENST00000503346 STK31Q9BXU1 1019 aa23.46■■□□□ 1.35
PDLIM7-209ENST00000503346 PHAXQ9H814 394 aaKnown RBP23.46■■□□□ 1.35
PDLIM7-209ENST00000503346 IBTKQ9P2D0 1353 aaPredicted RBP23.46■■□□□ 1.35
PDLIM7-209ENST00000503346 NPHP1O15259 732 aa23.45■■□□□ 1.34
PDLIM7-209ENST00000503346 TCIRG1Q13488 830 aa23.45■■□□□ 1.34
PDLIM7-209ENST00000503346 PARP10Q53GL7 1025 aa23.45■■□□□ 1.34
PDLIM7-209ENST00000503346 NYXQ9GZU5 481 aa23.45■■□□□ 1.34
PDLIM7-209ENST00000503346 PDZRN3Q9UPQ7 1066 aa23.45■■□□□ 1.34
PDLIM7-209ENST00000503346 CHRNA5P30532 468 aa23.44■■□□□ 1.34
PDLIM7-209ENST00000503346 PDE6BP35913 854 aa23.44■■□□□ 1.34
PDLIM7-209ENST00000503346 CCDC24Q8N4L8 307 aa23.44■■□□□ 1.34
PDLIM7-209ENST00000503346 GRIN3BO60391 1043 aa23.43■■□□□ 1.34
PDLIM7-209ENST00000503346 SUSD4Q5VX71 490 aa23.43■■□□□ 1.34
PDLIM7-209ENST00000503346 NUP98P52948 1817 aa23.43■■□□□ 1.34
PDLIM7-209ENST00000503346 FAM177BA6PVY3 158 aa23.42■■□□□ 1.34
PDLIM7-209ENST00000503346 TCERG1O14776 1098 aaKnown RBP23.42■■□□□ 1.34
PDLIM7-209ENST00000503346 C2CD5Q86YS7 1000 aa23.42■■□□□ 1.34
PDLIM7-209ENST00000503346 PIM2Q9P1W9 311 aa23.42■■□□□ 1.34
PDLIM7-209ENST00000503346 WWC3Q9ULE0 1092 aa23.42■■□□□ 1.34
PDLIM7-209ENST00000503346 H0YIN7 160 aa23.41■■□□□ 1.34
PDLIM7-209ENST00000503346 NTSR2O95665 410 aa23.41■■□□□ 1.34
PDLIM7-209ENST00000503346 SLC4A2P04920 1241 aa23.41■■□□□ 1.34
PDLIM7-209ENST00000503346 PPP1R42Q7Z4L9 355 aa23.41■■□□□ 1.34
PDLIM7-209ENST00000503346 TRMT2AQ8IZ69 625 aaKnown RBP23.41■■□□□ 1.34
PDLIM7-209ENST00000503346 CDCA7LQ96GN5 454 aa23.41■■□□□ 1.34
PDLIM7-209ENST00000503346 N4BP2Q86UW6 1770 aaPredicted RBP23.4■■□□□ 1.34
PDLIM7-209ENST00000503346 DDX58O95786 925 aaKnown RBP23.4■■□□□ 1.34
PDLIM7-209ENST00000503346 GTF2E1P29083 439 aaPredicted RBP23.4■■□□□ 1.34
PDLIM7-209ENST00000503346 RIC3Q7Z5B4 369 aa23.4■■□□□ 1.34
PDLIM7-209ENST00000503346 NLRP10Q86W26 655 aa23.4■■□□□ 1.34
PDLIM7-209ENST00000503346 ISCA1Q9BUE6 129 aa23.4■■□□□ 1.34
PDLIM7-209ENST00000503346 KLRG2A4D1S0 409 aaPredicted RBP23.39■■□□□ 1.33
PDLIM7-209ENST00000503346 NUTM1Q86Y26 1132 aa23.39■■□□□ 1.33
PDLIM7-209ENST00000503346 UTP14AQ9BVJ6 771 aaKnown RBP23.39■■□□□ 1.33
PDLIM7-209ENST00000503346 BCS1LQ9Y276 419 aa23.39■■□□□ 1.33
PDLIM7-209ENST00000503346 RNF123Q5XPI4 1314 aa23.38■■□□□ 1.33
PDLIM7-209ENST00000503346 GOLGB1Q14789 3259 aaKnown RBP23.38■■□□□ 1.33
PDLIM7-209ENST00000503346 TRIM28Q13263 835 aaKnown RBP23.38■■□□□ 1.33
PDLIM7-209ENST00000503346 DALRD3Q5D0E6 543 aaKnown RBP23.38■■□□□ 1.33
PDLIM7-209ENST00000503346 G2E3Q7L622 706 aa23.38■■□□□ 1.33
PDLIM7-209ENST00000503346 ABCC12Q96J65 1359 aa23.38■■□□□ 1.33
PDLIM7-209ENST00000503346 ANKRD31Q8N7Z5 1873 aa23.37■■□□□ 1.33
PDLIM7-209ENST00000503346 RIC1Q4ADV7 1423 aa23.37■■□□□ 1.33
PDLIM7-209ENST00000503346 ERFEQ4G0M1 354 aa23.37■■□□□ 1.33
PDLIM7-209ENST00000503346 SRGNP10124 158 aa23.36■■□□□ 1.33
PDLIM7-209ENST00000503346 HNRNPUQ00839 825 aaKnown RBP eCLIP23.36■■□□□ 1.33
PDLIM7-209ENST00000503346 FLIIQ13045 1269 aa23.36■■□□□ 1.33
PDLIM7-209ENST00000503346 KSR2Q6VAB6 950 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms