RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 NPHP1O15259 732 aa21.43■■□□□ 1.02
SCLT1-204ENST00000503215 NBPF5PQ86XG9 351 aaPredicted RBP21.43■■□□□ 1.02
SCLT1-204ENST00000503215 NIP7Q9Y221 180 aaKnown RBP eCLIP21.43■■□□□ 1.02
SCLT1-204ENST00000503215 NFKBIEO00221 500 aa21.42■■□□□ 1.02
SCLT1-204ENST00000503215 NEUROD2Q15784 382 aa21.42■■□□□ 1.02
SCLT1-204ENST00000503215 TTLL7Q6ZT98 887 aa21.42■■□□□ 1.02
SCLT1-204ENST00000503215 TSPYL4Q9UJ04 414 aa21.42■■□□□ 1.02
SCLT1-204ENST00000503215 SBF1O95248 1867 aa21.42■■□□□ 1.02
SCLT1-204ENST00000503215 COL11A2P13942 1736 aaPredicted RBP21.42■■□□□ 1.02
SCLT1-204ENST00000503215 C21orf2O43822 256 aa21.41■■□□□ 1.02
SCLT1-204ENST00000503215 MYL6BP14649 208 aa21.41■■□□□ 1.02
SCLT1-204ENST00000503215 ST5P78524 1137 aa21.41■■□□□ 1.02
SCLT1-204ENST00000503215 ADAMTS8Q9UP79 889 aa21.41■■□□□ 1.02
SCLT1-204ENST00000503215 ZNF652Q9Y2D9 606 aa21.41■■□□□ 1.02
SCLT1-204ENST00000503215 CEP350Q5VT06 3117 aa21.4■■□□□ 1.02
SCLT1-204ENST00000503215 SRGNP10124 158 aa21.4■■□□□ 1.02
SCLT1-204ENST00000503215 PRKRIP1Q9H875 184 aaPredicted RBP21.39■■□□□ 1.02
SCLT1-204ENST00000503215 LMNB1P20700 586 aa21.38■■□□□ 1.01
SCLT1-204ENST00000503215 TRIM35Q9UPQ4 493 aa21.38■■□□□ 1.01
SCLT1-204ENST00000503215 PDZRN3Q9UPQ7 1066 aa21.38■■□□□ 1.01
SCLT1-204ENST00000503215 LAMB4A4D0S4 1761 aa21.38■■□□□ 1.01
SCLT1-204ENST00000503215 STYK1Q6J9G0 422 aa21.37■■□□□ 1.01
SCLT1-204ENST00000503215 RGL2O15211 777 aa21.36■■□□□ 1.01
SCLT1-204ENST00000503215 ANXA1P04083 346 aa21.36■■□□□ 1.01
SCLT1-204ENST00000503215 HSPA6P17066 643 aa21.36■■□□□ 1.01
SCLT1-204ENST00000503215 EIF2S2P20042 333 aaKnown RBP21.36■■□□□ 1.01
SCLT1-204ENST00000503215 WDR43Q15061 677 aaKnown RBP eCLIP21.36■■□□□ 1.012e-6■■■■■ 30.3
SCLT1-204ENST00000503215 PDIA6Q15084 440 aa21.36■■□□□ 1.01
SCLT1-204ENST00000503215 KRT24Q2M2I5 525 aa21.36■■□□□ 1.01
SCLT1-204ENST00000503215 PROSER3Q2NL68 480 aa21.36■■□□□ 1.01
SCLT1-204ENST00000503215 PRPF40BQ6NWY9 871 aaKnown RBP21.36■■□□□ 1.01
SCLT1-204ENST00000503215 TPTE2Q6XPS3 522 aa21.36■■□□□ 1.01
SCLT1-204ENST00000503215 RUNDC1Q96C34 613 aa21.36■■□□□ 1.01
SCLT1-204ENST00000503215 MASTLQ96GX5 879 aa21.36■■□□□ 1.01
SCLT1-204ENST00000503215 ZBTB3Q9H5J0 574 aa21.36■■□□□ 1.01
SCLT1-204ENST00000503215 RRAGCQ9HB90 399 aa21.36■■□□□ 1.01
SCLT1-204ENST00000503215 MAP3K15Q6ZN16 1313 aa21.36■■□□□ 1.01
SCLT1-204ENST00000503215 SLX4Q8IY92 1834 aa21.36■■□□□ 1.01
SCLT1-204ENST00000503215 LRP10Q7Z4F1 713 aa21.36■■□□□ 1.01
SCLT1-204ENST00000503215 CNKSR1Q969H4 720 aa21.36■■□□□ 1.01
SCLT1-204ENST00000503215 KLRG2A4D1S0 409 aaPredicted RBP21.35■■□□□ 1.01
SCLT1-204ENST00000503215 ERVV-1B6SEH8 477 aa21.35■■□□□ 1.01
SCLT1-204ENST00000503215 TOMM70O94826 608 aa21.35■■□□□ 1.01
SCLT1-204ENST00000503215 GPTP24298 496 aa21.35■■□□□ 1.01
SCLT1-204ENST00000503215 NUTM1Q86Y26 1132 aa21.35■■□□□ 1.01
SCLT1-204ENST00000503215 NECTIN2Q92692 538 aa21.35■■□□□ 1.01
SCLT1-204ENST00000503215 LMOD3Q0VAK6 560 aa21.34■■□□□ 1.01
SCLT1-204ENST00000503215 OLFM4Q6UX06 510 aa21.34■■□□□ 1.01
SCLT1-204ENST00000503215 C7orf43Q8WVR3 580 aa21.34■■□□□ 1.01
SCLT1-204ENST00000503215 CHL1O00533 1208 aa21.33■■□□□ 1
SCLT1-204ENST00000503215 KIF6Q6ZMV9 814 aa21.33■■□□□ 1
SCLT1-204ENST00000503215 BABAM1Q9NWV8 329 aa21.33■■□□□ 1
SCLT1-204ENST00000503215 LAS1LQ9Y4W2 734 aaKnown RBP21.33■■□□□ 1
SCLT1-204ENST00000503215 UBN2Q6ZU65 1347 aa21.33■■□□□ 1
SCLT1-204ENST00000503215 KDM2BQ8NHM5 1336 aa21.33■■□□□ 1
SCLT1-204ENST00000503215 ERFEQ4G0M1 354 aa21.32■■□□□ 1
SCLT1-204ENST00000503215 SUSD4Q5VX71 490 aa21.32■■□□□ 1
SCLT1-204ENST00000503215 ABCC12Q96J65 1359 aa21.32■■□□□ 1
SCLT1-204ENST00000503215 CCDC88AQ3V6T2 1871 aa21.31■■□□□ 1
SCLT1-204ENST00000503215 NPR1P16066 1061 aa21.31■■□□□ 1
SCLT1-204ENST00000503215 GLTPD2A6NH11 291 aa21.3■■□□□ 1
SCLT1-204ENST00000503215 GTF2E1P29083 439 aaPredicted RBP21.3■■□□□ 1
SCLT1-204ENST00000503215 ZNF34Q8IZ26 560 aa21.3■■□□□ 1
SCLT1-204ENST00000503215 ERBB4Q15303 1308 aa21.3■■□□□ 1
SCLT1-204ENST00000503215 NUP98P52948 1817 aa21.29■■□□□ 1
SCLT1-204ENST00000503215 CCDC184Q52MB2 194 aa21.29■■□□□ 1
SCLT1-204ENST00000503215 TAOK3Q9H2K8 898 aa21.29■■□□□ 1
SCLT1-204ENST00000503215 CACNA1SQ13698 1873 aa21.29■■□□□ 1
SCLT1-204ENST00000503215 FER1L6Q2WGJ9 1857 aa21.29■■□□□ 1
SCLT1-204ENST00000503215 GIGYF2Q6Y7W6 1299 aaKnown RBP21.28■■□□□ 1
SCLT1-204ENST00000503215 RBM46Q8TBY0 533 aaKnown RBP21.28■■□□□ 1
SCLT1-204ENST00000503215 ZC3H4Q9UPT8 1303 aaKnown RBP21.28■■□□□ 1
SCLT1-204ENST00000503215 TNRC6CQ9HCJ0 1690 aaKnown RBP21.27■■□□□ 1
SCLT1-204ENST00000503215 C3orf67Q6ZVT6 689 aa21.27■■□□□ 1
SCLT1-204ENST00000503215 SLC51AQ86UW1 340 aa21.27■■□□□ 1
SCLT1-204ENST00000503215 LTBP3Q9NS15 1303 aa21.26■□□□□ 0.99
SCLT1-204ENST00000503215 POTECB2RU33 542 aa21.26■□□□□ 0.99
SCLT1-204ENST00000503215 APAF1O14727 1248 aa21.26■□□□□ 0.99
SCLT1-204ENST00000503215 AIMP1Q12904 312 aaKnown RBP21.26■□□□□ 0.99
SCLT1-204ENST00000503215 COPS6Q7L5N1 327 aa21.26■□□□□ 0.99
SCLT1-204ENST00000503215 C16orf71Q8IYS4 520 aaPredicted RBP21.26■□□□□ 0.99
SCLT1-204ENST00000503215 XAGE3Q8WTP9 111 aa21.26■□□□□ 0.99
SCLT1-204ENST00000503215 NYXQ9GZU5 481 aa21.26■□□□□ 0.99
SCLT1-204ENST00000503215 NTSR2O95665 410 aa21.25■□□□□ 0.99
SCLT1-204ENST00000503215 CRY2Q49AN0 593 aa21.25■□□□□ 0.99
SCLT1-204ENST00000503215 TIAM2Q8IVF5 1701 aa21.24■□□□□ 0.99
SCLT1-204ENST00000503215 HTRA3P83110 453 aa21.23■□□□□ 0.99
SCLT1-204ENST00000503215 CCDC93Q567U6 631 aa21.23■□□□□ 0.99
SCLT1-204ENST00000503215 SOGA3Q5TF21 947 aa21.23■□□□□ 0.99
SCLT1-204ENST00000503215 ZNF428Q96B54 188 aa21.23■□□□□ 0.99
SCLT1-204ENST00000503215 ZNF277Q9NRM2 450 aaPredicted RBP21.23■□□□□ 0.99
SCLT1-204ENST00000503215 CHPF2Q9P2E5 772 aa21.23■□□□□ 0.99
SCLT1-204ENST00000503215 ARFGEF2Q9Y6D5 1785 aa21.23■□□□□ 0.99
SCLT1-204ENST00000503215 VEGFAP15692 232 aaPredicted RBP21.23■□□□□ 0.99
SCLT1-204ENST00000503215 SYNE4Q8N205 404 aa21.23■□□□□ 0.99
SCLT1-204ENST00000503215 DDX21Q9NR30 783 aaKnown RBP eCLIP21.23■□□□□ 0.99
SCLT1-204ENST00000503215 MBIPQ9NS73 344 aa21.23■□□□□ 0.99
SCLT1-204ENST00000503215 DDNO94850 711 aaPredicted RBP21.22■□□□□ 0.99
SCLT1-204ENST00000503215 CFAP44Q96MT7 982 aa21.22■□□□□ 0.99
SCLT1-204ENST00000503215 ZNF853P0CG23 659 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms