RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 DIAPH3Q9NSV4 1193 aa29.37■■■□□ 2.29
DDX41-202ENST00000503078 LARGE1O95461 756 aa29.37■■■□□ 2.29
DDX41-202ENST00000503078 CPA1P15085 419 aa29.37■■■□□ 2.29
DDX41-202ENST00000503078 NUTM2GQ5VZR2 741 aa29.37■■■□□ 2.29
DDX41-202ENST00000503078 CEMIPQ8WUJ3 1361 aa29.37■■■□□ 2.29
DDX41-202ENST00000503078 HOXB7P09629 217 aa29.36■■■□□ 2.29
DDX41-202ENST00000503078 EIF4A1P60842 406 aaKnown RBP29.36■■■□□ 2.29
DDX41-202ENST00000503078 TPRNQ4KMQ1 711 aa29.36■■■□□ 2.29
DDX41-202ENST00000503078 DNTTIP2Q5QJE6 756 aaKnown RBP29.36■■■□□ 2.29
DDX41-202ENST00000503078 ZNF830Q96NB3 372 aaPredicted RBP29.36■■■□□ 2.29
DDX41-202ENST00000503078 PI4KAP2A4QPH2 592 aa29.35■■■□□ 2.29
DDX41-202ENST00000503078 VPS53Q5VIR6 699 aa29.35■■■□□ 2.29
DDX41-202ENST00000503078 MPNDQ8N594 471 aa29.35■■■□□ 2.29
DDX41-202ENST00000503078 PI4KAP1Q8N8J0 262 aa29.35■■■□□ 2.29
DDX41-202ENST00000503078 CHPF2Q9P2E5 772 aa29.35■■■□□ 2.29
DDX41-202ENST00000503078 KDM4AO75164 1064 aa29.35■■■□□ 2.29
DDX41-202ENST00000503078 GJB2P29033 226 aa29.35■■■□□ 2.29
DDX41-202ENST00000503078 NOLC1Q14978 699 aaKnown RBP eCLIP29.35■■■□□ 2.29
DDX41-202ENST00000503078 FUCA2Q9BTY2 467 aa29.35■■■□□ 2.29
DDX41-202ENST00000503078 OS9Q13438 667 aaPredicted RBP29.34■■■□□ 2.29
DDX41-202ENST00000503078 CCDC83Q8IWF9 413 aa29.34■■■□□ 2.29
DDX41-202ENST00000503078 MYRIPQ8NFW9 859 aa29.34■■■□□ 2.29
DDX41-202ENST00000503078 ZSCAN31Q96LW9 406 aaPredicted RBP29.34■■■□□ 2.29
DDX41-202ENST00000503078 CHMP4AQ9BY43 222 aa29.34■■■□□ 2.29
DDX41-202ENST00000503078 PDRG1Q9NUG6 133 aa29.34■■■□□ 2.29
DDX41-202ENST00000503078 MTMR6Q9Y217 621 aa29.34■■■□□ 2.29
DDX41-202ENST00000503078 USHBP1Q8N6Y0 703 aa29.33■■■□□ 2.29
DDX41-202ENST00000503078 TM6SF1Q9BZW5 370 aa29.33■■■□□ 2.29
DDX41-202ENST00000503078 SH2B1Q9NRF2 756 aaPredicted RBP29.33■■■□□ 2.29
DDX41-202ENST00000503078 USP54Q70EL1 1684 aa29.33■■■□□ 2.29
DDX41-202ENST00000503078 JAKMIP1Q96N16 626 aaKnown RBP29.33■■■□□ 2.29
DDX41-202ENST00000503078 TTC12Q9H892 705 aaPredicted RBP29.33■■■□□ 2.29
DDX41-202ENST00000503078 PTH1RQ03431 593 aa29.32■■■□□ 2.28
DDX41-202ENST00000503078 CLASRPQ8N2M8 674 aaKnown RBP29.32■■■□□ 2.28
DDX41-202ENST00000503078 KCNB2Q92953 911 aa29.32■■■□□ 2.28
DDX41-202ENST00000503078 PRIMPOLQ96LW4 560 aa29.32■■■□□ 2.28
DDX41-202ENST00000503078 MED1Q15648 1581 aaPredicted RBP29.32■■■□□ 2.28
DDX41-202ENST00000503078 ZSWIM6Q9HCJ5 1215 aa29.32■■■□□ 2.28
DDX41-202ENST00000503078 DNM1Q05193 864 aaKnown RBP29.31■■■□□ 2.28
DDX41-202ENST00000503078 MTX1Q13505 466 aa29.31■■■□□ 2.28
DDX41-202ENST00000503078 ADCK5Q3MIX3 580 aa29.31■■■□□ 2.28
DDX41-202ENST00000503078 CYP46A1Q9Y6A2 500 aa29.31■■■□□ 2.28
DDX41-202ENST00000503078 KCNA6P17658 529 aa29.31■■■□□ 2.28
DDX41-202ENST00000503078 PRPF40BQ6NWY9 871 aaKnown RBP29.31■■■□□ 2.28
DDX41-202ENST00000503078 GIMAP6Q6P9H5 292 aa29.31■■■□□ 2.28
DDX41-202ENST00000503078 ANKARQ7Z5J8 1434 aa29.31■■■□□ 2.28
DDX41-202ENST00000503078 ABTB2Q8N961 1025 aa29.3■■■□□ 2.28
DDX41-202ENST00000503078 ECHDC1Q9NTX5 307 aa29.3■■■□□ 2.28
DDX41-202ENST00000503078 KDM3BQ7LBC6 1761 aa29.3■■■□□ 2.28
DDX41-202ENST00000503078 ADCY9O60503 1353 aa29.29■■■□□ 2.28
DDX41-202ENST00000503078 HMGN5P82970 282 aaKnown RBP29.28■■■□□ 2.28
DDX41-202ENST00000503078 GPATCH3Q96I76 525 aa29.28■■■□□ 2.28
DDX41-202ENST00000503078 SPTLC3Q9NUV7 552 aa29.28■■■□□ 2.28
DDX41-202ENST00000503078 LGR6Q9HBX8 967 aa29.27■■■□□ 2.28
DDX41-202ENST00000503078 ZBTB7CA1YPR0 619 aa29.26■■■□□ 2.28
DDX41-202ENST00000503078 ST3GAL1Q11201 340 aa29.26■■■□□ 2.27
DDX41-202ENST00000503078 NECTIN1Q15223 517 aa29.26■■■□□ 2.27
DDX41-202ENST00000503078 ERC1Q8IUD2 1116 aa29.25■■■□□ 2.27
DDX41-202ENST00000503078 EVI5LQ96CN4 794 aa29.25■■■□□ 2.27
DDX41-202ENST00000503078 VPS37CA5D8V6 355 aaPredicted RBP29.25■■■□□ 2.27
DDX41-202ENST00000503078 ANXA1P04083 346 aa29.25■■■□□ 2.27
DDX41-202ENST00000503078 IFIT2P09913 472 aaKnown RBP29.25■■■□□ 2.27
DDX41-202ENST00000503078 ZKSCAN1P17029 563 aaPredicted RBP29.25■■■□□ 2.27
DDX41-202ENST00000503078 ME3Q16798 604 aa29.25■■■□□ 2.27
DDX41-202ENST00000503078 CCDC171Q6TFL3 1326 aa29.24■■■□□ 2.27
DDX41-202ENST00000503078 KCNQ3O43525 872 aa29.24■■■□□ 2.27
DDX41-202ENST00000503078 C17orf53Q8N3J3 647 aaPredicted RBP29.24■■■□□ 2.27
DDX41-202ENST00000503078 PLCB2Q00722 1185 aa29.24■■■□□ 2.27
DDX41-202ENST00000503078 GTF2F1P35269 517 aaKnown RBP eCLIP29.23■■■□□ 2.27
DDX41-202ENST00000503078 DTNBO60941 627 aa29.23■■■□□ 2.27
DDX41-202ENST00000503078 CHD2O14647 1828 aaKnown RBP29.22■■■□□ 2.27
DDX41-202ENST00000503078 AP5Z1O43299 807 aa29.21■■■□□ 2.27
DDX41-202ENST00000503078 ALDH1L1O75891 902 aa29.21■■■□□ 2.27
DDX41-202ENST00000503078 CCDC192P0DO97 292 aa29.21■■■□□ 2.27
DDX41-202ENST00000503078 PDIA4P13667 645 aaKnown RBP29.21■■■□□ 2.27
DDX41-202ENST00000503078 C9orf78Q9NZ63 289 aaPredicted RBP29.21■■■□□ 2.27
DDX41-202ENST00000503078 LTN1O94822 1766 aa29.21■■■□□ 2.27
DDX41-202ENST00000503078 ZNF142P52746 1687 aaPredicted RBP29.21■■■□□ 2.27
DDX41-202ENST00000503078 TPM3P06753 285 aa29.21■■■□□ 2.27
DDX41-202ENST00000503078 DBF4Q9UBU7 674 aaPredicted RBP29.21■■■□□ 2.27
DDX41-202ENST00000503078 RBM8AQ9Y5S9 174 aaKnown RBP29.21■■■□□ 2.27
DDX41-202ENST00000503078 BTBD11A6QL63 1104 aa29.2■■■□□ 2.27
DDX41-202ENST00000503078 TEFQ10587 303 aa29.2■■■□□ 2.27
DDX41-202ENST00000503078 CREB3L3Q68CJ9 461 aa29.2■■■□□ 2.27
DDX41-202ENST00000503078 NECAB1Q8N987 351 aa29.2■■■□□ 2.27
DDX41-202ENST00000503078 IP6K1Q92551 441 aa29.2■■■□□ 2.27
DDX41-202ENST00000503078 NBPF6Q5VWK0 638 aa29.2■■■□□ 2.26
DDX41-202ENST00000503078 ANKLE2Q86XL3 938 aa29.2■■■□□ 2.26
DDX41-202ENST00000503078 NBPF4Q96M43 638 aa29.2■■■□□ 2.26
DDX41-202ENST00000503078 TPCN1Q9ULQ1 816 aa29.2■■■□□ 2.26
DDX41-202ENST00000503078 PA2G4Q9UQ80 394 aaKnown RBP29.2■■■□□ 2.26
DDX41-202ENST00000503078 HDAC5Q9UQL6 1122 aa29.2■■■□□ 2.26
DDX41-202ENST00000503078 LARP1BQ659C4 914 aaKnown RBP29.19■■■□□ 2.26
DDX41-202ENST00000503078 AACSQ86V21 672 aa29.19■■■□□ 2.26
DDX41-202ENST00000503078 MAP4K1Q92918 833 aa29.19■■■□□ 2.26
DDX41-202ENST00000503078 MAP3K2Q9Y2U5 619 aa29.19■■■□□ 2.26
DDX41-202ENST00000503078 HIP1O00291 1037 aa29.18■■■□□ 2.26
DDX41-202ENST00000503078 KRT85P78386 507 aa29.18■■■□□ 2.26
DDX41-202ENST00000503078 C14orf37Q86TY3 774 aa29.18■■■□□ 2.26
DDX41-202ENST00000503078 DDX54Q8TDD1 881 aaKnown RBP29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms