RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 APBB1O00213 710 aa7.82□□□□□ -1.16
CLCN3-203ENST00000502998 PES1O00541 588 aaKnown RBP7.82□□□□□ -1.16
CLCN3-203ENST00000502998 HSP90AB1P08238 724 aaKnown RBP7.82□□□□□ -1.16
CLCN3-203ENST00000502998 IFNL1Q8IU54 200 aa7.82□□□□□ -1.16
CLCN3-203ENST00000502998 OGFOD1Q8N543 542 aa7.82□□□□□ -1.16
CLCN3-203ENST00000502998 MYRIPQ8NFW9 859 aa7.82□□□□□ -1.16
CLCN3-203ENST00000502998 KCNV2Q8TDN2 545 aa7.82□□□□□ -1.16
CLCN3-203ENST00000502998 PTPRUQ92729 1446 aa7.82□□□□□ -1.16
CLCN3-203ENST00000502998 MAF1Q9H063 256 aa7.82□□□□□ -1.16
CLCN3-203ENST00000502998 DEF6Q9H4E7 631 aa7.82□□□□□ -1.16
CLCN3-203ENST00000502998 GRPEL1Q9HAV7 217 aa7.82□□□□□ -1.16
CLCN3-203ENST00000502998 NCOA3Q9Y6Q9 1424 aa7.82□□□□□ -1.16
CLCN3-203ENST00000502998 AHDC1Q5TGY3 1603 aaPredicted RBP7.81□□□□□ -1.16
CLCN3-203ENST00000502998 AFF2P51816 1311 aa7.81□□□□□ -1.16
CLCN3-203ENST00000502998 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.81□□□□□ -1.16
CLCN3-203ENST00000502998 SETBP1Q9Y6X0 1596 aa7.81□□□□□ -1.16
CLCN3-203ENST00000502998 PPFIA2O75334 1257 aa7.81□□□□□ -1.16
CLCN3-203ENST00000502998 PPFIA4O75335 1185 aa7.81□□□□□ -1.16
CLCN3-203ENST00000502998 SLFN14P0C7P3 912 aa7.81□□□□□ -1.16
CLCN3-203ENST00000502998 PLCG2P16885 1265 aa7.81□□□□□ -1.16
CLCN3-203ENST00000502998 CASQ1P31415 396 aa7.81□□□□□ -1.16
CLCN3-203ENST00000502998 COPB2P35606 906 aa7.81□□□□□ -1.16
CLCN3-203ENST00000502998 NUBP1P53384 320 aa7.81□□□□□ -1.16
CLCN3-203ENST00000502998 AMOTQ4VCS5 1084 aa7.81□□□□□ -1.16
CLCN3-203ENST00000502998 ZFYVE27Q5T4F4 411 aa7.81□□□□□ -1.16
CLCN3-203ENST00000502998 MORC4Q8TE76 937 aa7.81□□□□□ -1.16
CLCN3-203ENST00000502998 CFAP53Q96M91 514 aa7.81□□□□□ -1.16
CLCN3-203ENST00000502998 ARPC5LQ9BPX5 153 aa7.81□□□□□ -1.16
CLCN3-203ENST00000502998 ARHGEF10LQ9HCE6 1279 aa7.81□□□□□ -1.16
CLCN3-203ENST00000502998 AMOTL2Q9Y2J4 779 aa7.81□□□□□ -1.16
CLCN3-203ENST00000502998 SHPRHQ149N8 1683 aa7.81□□□□□ -1.16
CLCN3-203ENST00000502998 ERBB3P21860 1342 aa7.8□□□□□ -1.16
CLCN3-203ENST00000502998 NEXMIFQ5QGS0 1516 aa7.8□□□□□ -1.16
CLCN3-203ENST00000502998 NUTM2BA6NNL0 878 aaPredicted RBP7.8□□□□□ -1.16
CLCN3-203ENST00000502998 NUTM2EB1AL46 878 aaPredicted RBP7.8□□□□□ -1.16
CLCN3-203ENST00000502998 TRAF1Q13077 416 aa7.8□□□□□ -1.16
CLCN3-203ENST00000502998 SF3B2Q13435 895 aaKnown RBP7.8□□□□□ -1.16
CLCN3-203ENST00000502998 MEX3CQ5U5Q3 659 aaKnown RBP7.8□□□□□ -1.16
CLCN3-203ENST00000502998 BRINP3Q76B58 766 aa7.8□□□□□ -1.16
CLCN3-203ENST00000502998 NUTM2AQ8IVF1 878 aaPredicted RBP7.8□□□□□ -1.16
CLCN3-203ENST00000502998 TMEM106CQ9BVX2 250 aa7.8□□□□□ -1.16
CLCN3-203ENST00000502998 TMEM121BQ9BXQ6 578 aaPredicted RBP7.8□□□□□ -1.16
CLCN3-203ENST00000502998 XRN1Q8IZH2 1706 aaKnown RBP7.8□□□□□ -1.16
CLCN3-203ENST00000502998 ZC3H4Q9UPT8 1303 aaKnown RBP7.79□□□□□ -1.16
CLCN3-203ENST00000502998 HFM1A2PYH4 1435 aa7.79□□□□□ -1.16
CLCN3-203ENST00000502998 RIOK3O14730 519 aaKnown RBP7.79□□□□□ -1.16
CLCN3-203ENST00000502998 ATF3P18847 181 aa7.79□□□□□ -1.16
CLCN3-203ENST00000502998 CHAF1AQ13111 956 aaPredicted RBP7.79□□□□□ -1.16
CLCN3-203ENST00000502998 MMRN1Q13201 1228 aa7.79□□□□□ -1.16
CLCN3-203ENST00000502998 ATP2B3Q16720 1220 aa7.79□□□□□ -1.16
CLCN3-203ENST00000502998 MAP9Q49MG5 647 aa7.79□□□□□ -1.16
CLCN3-203ENST00000502998 DNAJC21Q5F1R6 531 aaKnown RBP7.79□□□□□ -1.16
CLCN3-203ENST00000502998 CLEC4GQ6UXB4 293 aa7.79□□□□□ -1.16
CLCN3-203ENST00000502998 CADPS2Q86UW7 1296 aa7.79□□□□□ -1.16
CLCN3-203ENST00000502998 DDX17Q92841 729 aaKnown RBP7.79□□□□□ -1.16
CLCN3-203ENST00000502998 AGAP3Q96P47 875 aa7.79□□□□□ -1.16
CLCN3-203ENST00000502998 IRF2BPLQ9H1B7 796 aa7.79□□□□□ -1.16
CLCN3-203ENST00000502998 C19orf44Q9H6X5 657 aa7.79□□□□□ -1.16
CLCN3-203ENST00000502998 ETAA1Q9NY74 926 aa7.79□□□□□ -1.16
CLCN3-203ENST00000502998 METP08581 1390 aa7.79□□□□□ -1.16
CLCN3-203ENST00000502998 IBTKQ9P2D0 1353 aaPredicted RBP7.79□□□□□ -1.16
CLCN3-203ENST00000502998 KIF1BO60333 1816 aa7.78□□□□□ -1.16
CLCN3-203ENST00000502998 IPO5O00410 1097 aaKnown RBP7.78□□□□□ -1.16
CLCN3-203ENST00000502998 KIF4AO95239 1232 aa7.78□□□□□ -1.16
CLCN3-203ENST00000502998 ATP2B1P20020 1258 aa7.78□□□□□ -1.16
CLCN3-203ENST00000502998 PAX3P23760 479 aa7.78□□□□□ -1.16
CLCN3-203ENST00000502998 PPP2R5AQ15172 486 aa7.78□□□□□ -1.16
CLCN3-203ENST00000502998 NLRP13Q86W25 1043 aa7.78□□□□□ -1.16
CLCN3-203ENST00000502998 SPNS2Q8IVW8 549 aa7.78□□□□□ -1.16
CLCN3-203ENST00000502998 SUGP1Q8IWZ8 645 aaKnown RBP7.78□□□□□ -1.16
CLCN3-203ENST00000502998 TNPO1Q92973 898 aaKnown RBP7.78□□□□□ -1.16
CLCN3-203ENST00000502998 EVI5LQ96CN4 794 aa7.78□□□□□ -1.16
CLCN3-203ENST00000502998 ZNF396Q96N95 335 aaPredicted RBP7.78□□□□□ -1.16
CLCN3-203ENST00000502998 LZTS2Q9BRK4 669 aa7.78□□□□□ -1.16
CLCN3-203ENST00000502998 PANK2Q9BZ23 570 aa7.78□□□□□ -1.16
CLCN3-203ENST00000502998 UTP6Q9NYH9 597 aaKnown RBP7.78□□□□□ -1.16
CLCN3-203ENST00000502998 JRKLQ9Y4A0 524 aa7.78□□□□□ -1.16
CLCN3-203ENST00000502998 SH3BP5O60239 455 aa7.77□□□□□ -1.17
CLCN3-203ENST00000502998 VDRP11473 427 aa7.77□□□□□ -1.17
CLCN3-203ENST00000502998 SKILP12757 684 aa7.77□□□□□ -1.17
CLCN3-203ENST00000502998 NAT1P18440 290 aa7.77□□□□□ -1.17
CLCN3-203ENST00000502998 FLT3P36888 993 aa7.77□□□□□ -1.17
CLCN3-203ENST00000502998 ADCY2Q08462 1091 aa7.77□□□□□ -1.17
CLCN3-203ENST00000502998 MUM1L1Q5H9M0 696 aa7.77□□□□□ -1.17
CLCN3-203ENST00000502998 WWC2Q6AWC2 1192 aa7.77□□□□□ -1.17
CLCN3-203ENST00000502998 PNISRQ8TF01 805 aaKnown RBP7.77□□□□□ -1.17
CLCN3-203ENST00000502998 POLR3CQ9BUI4 534 aaPredicted RBP7.77□□□□□ -1.17
CLCN3-203ENST00000502998 C22orf23Q9BZE7 217 aa7.77□□□□□ -1.17
CLCN3-203ENST00000502998 QTRT2Q9H974 415 aaKnown RBP7.77□□□□□ -1.17
CLCN3-203ENST00000502998 METTL14Q9HCE5 456 aaKnown RBP7.77□□□□□ -1.17
CLCN3-203ENST00000502998 PNMA2Q9UL42 364 aa7.77□□□□□ -1.17
CLCN3-203ENST00000502998 TBC1D2BQ9UPU7 963 aa7.77□□□□□ -1.17
CLCN3-203ENST00000502998 DCCP43146 1447 aa7.77□□□□□ -1.17
CLCN3-203ENST00000502998 A0A1B0GUL7 405 aa7.76□□□□□ -1.17
CLCN3-203ENST00000502998 SNPHO15079 494 aa7.76□□□□□ -1.17
CLCN3-203ENST00000502998 RBM5P52756 815 aaKnown RBP eCLIP7.76□□□□□ -1.17
CLCN3-203ENST00000502998 MCM6Q14566 821 aa7.76□□□□□ -1.17
CLCN3-203ENST00000502998 RASA3Q14644 834 aa7.76□□□□□ -1.17
CLCN3-203ENST00000502998 BMS1Q14692 1282 aaKnown RBP7.76□□□□□ -1.17
CLCN3-203ENST00000502998 TERF2Q15554 542 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms