RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 C11orf91Q3C1V1 193 aa10.92□□□□□ -0.66
NEDD4-203ENST00000502612 ZNF280CQ8ND82 737 aa10.92□□□□□ -0.66
NEDD4-203ENST00000502612 ZDHHC3Q9NYG2 299 aa10.92□□□□□ -0.66
NEDD4-203ENST00000502612 MSX1P28360 303 aa10.91□□□□□ -0.66
NEDD4-203ENST00000502612 IFT43Q96FT9 208 aa10.91□□□□□ -0.66
NEDD4-203ENST00000502612 GPAMQ9HCL2 828 aa10.91□□□□□ -0.66
NEDD4-203ENST00000502612 CCDC87Q9NVE4 849 aa10.91□□□□□ -0.66
NEDD4-203ENST00000502612 FZD6O60353 706 aa10.9□□□□□ -0.66
NEDD4-203ENST00000502612 BRD2P25440 801 aaKnown RBP10.9□□□□□ -0.66
NEDD4-203ENST00000502612 LAPTM4AQ15012 233 aa10.9□□□□□ -0.66
NEDD4-203ENST00000502612 IRX2Q9BZI1 471 aaPredicted RBP10.9□□□□□ -0.66
NEDD4-203ENST00000502612 SENP3-EIF4A1A0A087X0R7 540 aa10.89□□□□□ -0.67
NEDD4-203ENST00000502612 TATP17735 454 aaPredicted RBP10.89□□□□□ -0.67
NEDD4-203ENST00000502612 WDR44Q5JSH3 913 aa10.89□□□□□ -0.67
NEDD4-203ENST00000502612 ZNF428Q96B54 188 aa10.89□□□□□ -0.67
NEDD4-203ENST00000502612 SUSD3Q96L08 255 aa10.89□□□□□ -0.67
NEDD4-203ENST00000502612 DCTN4Q9UJW0 460 aa10.89□□□□□ -0.67
NEDD4-203ENST00000502612 MAN1A2O60476 641 aa10.88□□□□□ -0.67
NEDD4-203ENST00000502612 BICDL1Q6ZP65 573 aa10.88□□□□□ -0.67
NEDD4-203ENST00000502612 TREML1Q86YW5 311 aa10.88□□□□□ -0.67
NEDD4-203ENST00000502612 ABTB2Q8N961 1025 aa10.88□□□□□ -0.67
NEDD4-203ENST00000502612 ZIC5Q96T25 663 aa10.88□□□□□ -0.67
NEDD4-203ENST00000502612 A0A1B0GTH6 734 aa10.87□□□□□ -0.67
NEDD4-203ENST00000502612 AAMPQ13685 434 aa10.87□□□□□ -0.67
NEDD4-203ENST00000502612 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.87□□□□□ -0.67
NEDD4-203ENST00000502612 GAS2L1Q99501 681 aaPredicted RBP10.87□□□□□ -0.67
NEDD4-203ENST00000502612 RUBCNLQ9H714 662 aa10.87□□□□□ -0.67
NEDD4-203ENST00000502612 ZAP70P43403 619 aa10.86□□□□□ -0.67
NEDD4-203ENST00000502612 ARSJQ5FYB0 599 aaPredicted RBP10.86□□□□□ -0.67
NEDD4-203ENST00000502612 LRRC69Q6ZNQ3 347 aa10.86□□□□□ -0.67
NEDD4-203ENST00000502612 ANKRD33BA6NCL7 494 aa10.85□□□□□ -0.67
NEDD4-203ENST00000502612 LCE2BO14633 110 aa10.85□□□□□ -0.67
NEDD4-203ENST00000502612 GMPR2Q9P2T1 348 aaKnown RBP10.85□□□□□ -0.67
NEDD4-203ENST00000502612 A0A1W2PNR3 127 aa10.84□□□□□ -0.67
NEDD4-203ENST00000502612 TGFBR3LH3BV60 316 aa10.84□□□□□ -0.67
NEDD4-203ENST00000502612 EDEM1Q92611 657 aa10.84□□□□□ -0.67
NEDD4-203ENST00000502612 DMGDHQ9UI17 866 aaKnown RBP10.84□□□□□ -0.67
NEDD4-203ENST00000502612 BRPF3Q9ULD4 1205 aa10.84□□□□□ -0.67
NEDD4-203ENST00000502612 POLIQ9UNA4 740 aa10.84□□□□□ -0.67
NEDD4-203ENST00000502612 USP20Q9Y2K6 914 aa10.84□□□□□ -0.67
NEDD4-203ENST00000502612 DYRK1BQ9Y463 629 aa10.84□□□□□ -0.67
NEDD4-203ENST00000502612 MICAL2O94851 1124 aa10.83□□□□□ -0.68
NEDD4-203ENST00000502612 THBS1P07996 1170 aa10.83□□□□□ -0.68
NEDD4-203ENST00000502612 DNM1Q05193 864 aaKnown RBP10.83□□□□□ -0.68
NEDD4-203ENST00000502612 ALKBH2Q6NS38 261 aa10.83□□□□□ -0.68
NEDD4-203ENST00000502612 NPAS4Q8IUM7 802 aa10.83□□□□□ -0.68
NEDD4-203ENST00000502612 GPR152Q8TDT2 470 aa10.83□□□□□ -0.68
NEDD4-203ENST00000502612 ASB16Q96NS5 453 aa10.83□□□□□ -0.68
NEDD4-203ENST00000502612 NDUFB5O43674 189 aa10.82□□□□□ -0.68
NEDD4-203ENST00000502612 PTSQ03393 145 aa10.82□□□□□ -0.68
NEDD4-203ENST00000502612 TMC7Q7Z402 723 aa10.82□□□□□ -0.68
NEDD4-203ENST00000502612 OPLAHO14841 1288 aa10.81□□□□□ -0.68
NEDD4-203ENST00000502612 F11P03951 625 aa10.81□□□□□ -0.68
NEDD4-203ENST00000502612 PDGFAP04085 211 aa10.81□□□□□ -0.68
NEDD4-203ENST00000502612 IDH3AP50213 366 aa10.81□□□□□ -0.68
NEDD4-203ENST00000502612 RBCK1Q9BYM8 510 aa10.81□□□□□ -0.68
NEDD4-203ENST00000502612 CRISPLD1Q9H336 500 aa10.81□□□□□ -0.68
NEDD4-203ENST00000502612 GPC6Q9Y625 555 aaPredicted RBP10.81□□□□□ -0.68
NEDD4-203ENST00000502612 SNRPBP14678 240 aaKnown RBP10.8□□□□□ -0.68
NEDD4-203ENST00000502612 BTLAQ7Z6A9 289 aa10.8□□□□□ -0.68
NEDD4-203ENST00000502612 NPM2Q86SE8 214 aaKnown RBP10.8□□□□□ -0.68
NEDD4-203ENST00000502612 CUEDC1Q9NWM3 386 aaPredicted RBP10.8□□□□□ -0.68
NEDD4-203ENST00000502612 SLC35F4A4IF30 521 aa10.79□□□□□ -0.68
NEDD4-203ENST00000502612 A6NHS1 94 aa10.79□□□□□ -0.68
NEDD4-203ENST00000502612 IGHA2P01877 340 aa10.79□□□□□ -0.68
NEDD4-203ENST00000502612 GRNP28799 593 aaKnown RBP10.79□□□□□ -0.68
NEDD4-203ENST00000502612 IER5Q5VY09 327 aa10.79□□□□□ -0.68
NEDD4-203ENST00000502612 RIPOR1Q6ZS17 1223 aa10.79□□□□□ -0.68
NEDD4-203ENST00000502612 RGL4Q8IZJ4 473 aa10.79□□□□□ -0.68
NEDD4-203ENST00000502612 NUDT16Q96DE0 195 aaKnown RBP10.79□□□□□ -0.68
NEDD4-203ENST00000502612 TRIM47Q96LD4 638 aa10.79□□□□□ -0.68
NEDD4-203ENST00000502612 NEUROD4Q9HD90 331 aa10.79□□□□□ -0.68
NEDD4-203ENST00000502612 GPR182O15218 404 aa10.78□□□□□ -0.68
NEDD4-203ENST00000502612 MZF1P28698 734 aaPredicted RBP10.78□□□□□ -0.68
NEDD4-203ENST00000502612 TYRO3Q06418 890 aa10.78□□□□□ -0.68
NEDD4-203ENST00000502612 HIF1AQ16665 826 aa10.78□□□□□ -0.68
NEDD4-203ENST00000502612 Q6ZNB5 142 aa10.78□□□□□ -0.68
NEDD4-203ENST00000502612 TMC1Q8TDI8 760 aa10.78□□□□□ -0.68
NEDD4-203ENST00000502612 ANKIB1Q9P2G1 1089 aa10.78□□□□□ -0.68
NEDD4-203ENST00000502612 INPP5BP32019 993 aa10.77□□□□□ -0.69
NEDD4-203ENST00000502612 TAGLNQ01995 201 aaKnown RBP10.77□□□□□ -0.69
NEDD4-203ENST00000502612 ZSCAN29Q8IWY8 852 aaPredicted RBP10.77□□□□□ -0.69
NEDD4-203ENST00000502612 GJD3Q8N144 294 aa10.77□□□□□ -0.69
NEDD4-203ENST00000502612 PGBD3Q8N328 593 aa10.77□□□□□ -0.69
NEDD4-203ENST00000502612 FAM129BQ96TA1 746 aa10.77□□□□□ -0.69
NEDD4-203ENST00000502612 GGNBP2Q9H3C7 697 aa10.77□□□□□ -0.69
NEDD4-203ENST00000502612 SENP2Q9HC62 589 aa10.77□□□□□ -0.69
NEDD4-203ENST00000502612 GJA3Q9Y6H8 435 aa10.77□□□□□ -0.69
NEDD4-203ENST00000502612 RBM25P49756 843 aaKnown RBP10.76□□□□□ -0.69
NEDD4-203ENST00000502612 CCDC155Q8N6L0 562 aa10.76□□□□□ -0.69
NEDD4-203ENST00000502612 KIFC2Q96AC6 838 aa10.76□□□□□ -0.69
NEDD4-203ENST00000502612 ARSDP51689 593 aa10.75□□□□□ -0.69
NEDD4-203ENST00000502612 TRIP4Q15650 581 aaPredicted RBP10.75□□□□□ -0.69
NEDD4-203ENST00000502612 CEP63Q96MT8 703 aa10.75□□□□□ -0.69
NEDD4-203ENST00000502612 ZCCHC2Q9C0B9 1178 aaKnown RBP10.75□□□□□ -0.69
NEDD4-203ENST00000502612 POTECB2RU33 542 aa10.74□□□□□ -0.69
NEDD4-203ENST00000502612 P4HBP07237 508 aaKnown RBP10.74□□□□□ -0.69
NEDD4-203ENST00000502612 ERCC3P19447 782 aa10.74□□□□□ -0.69
NEDD4-203ENST00000502612 UBAP2LQ14157 1087 aaKnown RBP10.74□□□□□ -0.69
NEDD4-203ENST00000502612 RTCBQ9Y3I0 505 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms