RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 DBF4Q9UBU7 674 aaPredicted RBP9.44□□□□□ -0.9
USP46-203ENST00000502443 AFDNP55196 1824 aaKnown RBP9.43□□□□□ -0.9
USP46-203ENST00000502443 MAP3K15Q6ZN16 1313 aa9.43□□□□□ -0.9
USP46-203ENST00000502443 FANCIQ9NVI1 1328 aa9.43□□□□□ -0.9
USP46-203ENST00000502443 ERVV-1B6SEH8 477 aa9.43□□□□□ -0.9
USP46-203ENST00000502443 NPHP1O15259 732 aa9.43□□□□□ -0.9
USP46-203ENST00000502443 SERPINB2P05120 415 aa9.43□□□□□ -0.9
USP46-203ENST00000502443 GOLGA2Q08379 1002 aa9.43□□□□□ -0.9
USP46-203ENST00000502443 AIMP1Q12904 312 aaKnown RBP9.43□□□□□ -0.9
USP46-203ENST00000502443 COPS6Q7L5N1 327 aa9.43□□□□□ -0.9
USP46-203ENST00000502443 LRP10Q7Z4F1 713 aa9.43□□□□□ -0.9
USP46-203ENST00000502443 XAGE3Q8WTP9 111 aa9.43□□□□□ -0.9
USP46-203ENST00000502443 ZBTB3Q9H5J0 574 aa9.43□□□□□ -0.9
USP46-203ENST00000502443 MYH16Q9H6N6 1097 aa9.43□□□□□ -0.9
USP46-203ENST00000502443 SPINK5Q9NQ38 1064 aaPredicted RBP9.43□□□□□ -0.9
USP46-203ENST00000502443 NUP98P52948 1817 aa9.42□□□□□ -0.9
USP46-203ENST00000502443 KIF13BQ9NQT8 1826 aa9.42□□□□□ -0.9
USP46-203ENST00000502443 CARMIL3Q8ND23 1372 aa9.42□□□□□ -0.9
USP46-203ENST00000502443 ZNF521Q96K83 1311 aa9.42□□□□□ -0.9
USP46-203ENST00000502443 RGL2O15211 777 aa9.42□□□□□ -0.9
USP46-203ENST00000502443 GPR162Q16538 588 aa9.42□□□□□ -0.9
USP46-203ENST00000502443 TWISTNBQ3B726 338 aaPredicted RBP9.42□□□□□ -0.9
USP46-203ENST00000502443 CCDC30Q5VVM6 783 aa9.42□□□□□ -0.9
USP46-203ENST00000502443 PELP1Q8IZL8 1130 aaKnown RBP9.42□□□□□ -0.9
USP46-203ENST00000502443 CHMP4AQ9BY43 222 aa9.42□□□□□ -0.9
USP46-203ENST00000502443 HYPKQ9NX55 129 aa9.42□□□□□ -0.9
USP46-203ENST00000502443 NIP7Q9Y221 180 aaKnown RBP eCLIP9.42□□□□□ -0.9
USP46-203ENST00000502443 C10orf71Q711Q0 1435 aa9.41□□□□□ -0.9
USP46-203ENST00000502443 A0A0G2JLW4 131 aa9.41□□□□□ -0.9
USP46-203ENST00000502443 TGFB2P61812 414 aa9.41□□□□□ -0.9
USP46-203ENST00000502443 EXOSC9Q06265 439 aaKnown RBP9.41□□□□□ -0.9
USP46-203ENST00000502443 GIGYF2Q6Y7W6 1299 aaKnown RBP9.41□□□□□ -0.9
USP46-203ENST00000502443 NBPF5PQ86XG9 351 aaPredicted RBP9.41□□□□□ -0.9
USP46-203ENST00000502443 CNBD1Q8NA66 436 aa9.41□□□□□ -0.9
USP46-203ENST00000502443 WWC3Q9ULE0 1092 aa9.41□□□□□ -0.9
USP46-203ENST00000502443 N4BP2Q86UW6 1770 aaPredicted RBP9.41□□□□□ -0.9
USP46-203ENST00000502443 NRXN2Q9P2S2 1712 aa9.4□□□□□ -0.9
USP46-203ENST00000502443 FAM177BA6PVY3 158 aa9.4□□□□□ -0.9
USP46-203ENST00000502443 TCERG1O14776 1098 aaKnown RBP9.4□□□□□ -0.9
USP46-203ENST00000502443 DPEP1P16444 411 aa9.4□□□□□ -0.9
USP46-203ENST00000502443 GPTP24298 496 aa9.4□□□□□ -0.9
USP46-203ENST00000502443 PRR5LQ6MZQ0 368 aa9.4□□□□□ -0.9
USP46-203ENST00000502443 CCDC24Q8N4L8 307 aa9.4□□□□□ -0.9
USP46-203ENST00000502443 STK31Q9BXU1 1019 aa9.4□□□□□ -0.9
USP46-203ENST00000502443 PXDNLA1KZ92 1463 aa9.4□□□□□ -0.91
USP46-203ENST00000502443 E9PSI1 815 aa9.39□□□□□ -0.91
USP46-203ENST00000502443 VAMP4O75379 141 aa9.39□□□□□ -0.91
USP46-203ENST00000502443 GTF2E1P29083 439 aaPredicted RBP9.39□□□□□ -0.91
USP46-203ENST00000502443 ST5P78524 1137 aa9.39□□□□□ -0.91
USP46-203ENST00000502443 TPTE2Q6XPS3 522 aa9.39□□□□□ -0.91
USP46-203ENST00000502443 ANKRD13DQ6ZTN6 518 aa9.39□□□□□ -0.91
USP46-203ENST00000502443 PLBD2Q8NHP8 589 aa9.39□□□□□ -0.91
USP46-203ENST00000502443 CDCA7LQ96GN5 454 aa9.39□□□□□ -0.91
USP46-203ENST00000502443 PHAXQ9H814 394 aaKnown RBP9.39□□□□□ -0.91
USP46-203ENST00000502443 ATP10DQ9P241 1426 aa9.39□□□□□ -0.91
USP46-203ENST00000502443 SLC4A2P04920 1241 aa9.38□□□□□ -0.91
USP46-203ENST00000502443 YBX3P16989 372 aaKnown RBP eCLIP9.38□□□□□ -0.91
USP46-203ENST00000502443 CHRNA5P30532 468 aa9.38□□□□□ -0.91
USP46-203ENST00000502443 HNRNPUQ00839 825 aaKnown RBP eCLIP9.38□□□□□ -0.91
USP46-203ENST00000502443 SLFN5Q08AF3 891 aa9.38□□□□□ -0.91
USP46-203ENST00000502443 TCIRG1Q13488 830 aa9.38□□□□□ -0.91
USP46-203ENST00000502443 HSP90AB3PQ58FF7 597 aa9.38□□□□□ -0.91
USP46-203ENST00000502443 RIC3Q7Z5B4 369 aa9.38□□□□□ -0.91
USP46-203ENST00000502443 ZNF34Q8IZ26 560 aa9.38□□□□□ -0.91
USP46-203ENST00000502443 BRIP1Q9BX63 1249 aa9.38□□□□□ -0.91
USP46-203ENST00000502443 NYXQ9GZU5 481 aa9.38□□□□□ -0.91
USP46-203ENST00000502443 KIAA1551Q9HCM1 1747 aa9.38□□□□□ -0.91
USP46-203ENST00000502443 UBN2Q6ZU65 1347 aa9.37□□□□□ -0.91
USP46-203ENST00000502443 ANKRD31Q8N7Z5 1873 aa9.37□□□□□ -0.91
USP46-203ENST00000502443 H0YIN7 160 aa9.37□□□□□ -0.91
USP46-203ENST00000502443 DDX58O95786 925 aaKnown RBP9.37□□□□□ -0.91
USP46-203ENST00000502443 KCNA3P22001 575 aa9.37□□□□□ -0.91
USP46-203ENST00000502443 PDE6BP35913 854 aa9.37□□□□□ -0.91
USP46-203ENST00000502443 PARP10Q53GL7 1025 aa9.37□□□□□ -0.91
USP46-203ENST00000502443 SUSD4Q5VX71 490 aa9.37□□□□□ -0.91
USP46-203ENST00000502443 PPP1R42Q7Z4L9 355 aa9.37□□□□□ -0.91
USP46-203ENST00000502443 NUTM1Q86Y26 1132 aa9.37□□□□□ -0.91
USP46-203ENST00000502443 C2CD5Q86YS7 1000 aa9.37□□□□□ -0.91
USP46-203ENST00000502443 PIM2Q9P1W9 311 aa9.37□□□□□ -0.91
USP46-203ENST00000502443 BCS1LQ9Y276 419 aa9.37□□□□□ -0.91
USP46-203ENST00000502443 CACNA1FO60840 1977 aa9.37□□□□□ -0.91
USP46-203ENST00000502443 ANKRD36CQ5JPF3 1778 aa9.37□□□□□ -0.91
USP46-203ENST00000502443 ATP5J2-PTCD1G3V325 749 aa9.36□□□□□ -0.91
USP46-203ENST00000502443 GRIN3BO60391 1043 aa9.36□□□□□ -0.91
USP46-203ENST00000502443 ERFEQ4G0M1 354 aa9.36□□□□□ -0.91
USP46-203ENST00000502443 G2E3Q7L622 706 aa9.36□□□□□ -0.91
USP46-203ENST00000502443 ZNF428Q96B54 188 aa9.36□□□□□ -0.91
USP46-203ENST00000502443 UTP14AQ9BVJ6 771 aaKnown RBP9.36□□□□□ -0.91
USP46-203ENST00000502443 ARFGEF2Q9Y6D5 1785 aa9.36□□□□□ -0.91
USP46-203ENST00000502443 BRCA1P38398 1863 aaKnown RBP9.36□□□□□ -0.91
USP46-203ENST00000502443 GOLGB1Q14789 3259 aaKnown RBP9.36□□□□□ -0.91
USP46-203ENST00000502443 PI4KAP2A4QPH2 592 aa9.35□□□□□ -0.91
USP46-203ENST00000502443 DALRD3Q5D0E6 543 aaKnown RBP9.35□□□□□ -0.91
USP46-203ENST00000502443 KSR2Q6VAB6 950 aa9.35□□□□□ -0.91
USP46-203ENST00000502443 NLRP10Q86W26 655 aa9.35□□□□□ -0.91
USP46-203ENST00000502443 PI4KAP1Q8N8J0 262 aa9.35□□□□□ -0.91
USP46-203ENST00000502443 ZNF622Q969S3 477 aaKnown RBP eCLIP9.35□□□□□ -0.91
USP46-203ENST00000502443 TRMT112Q9UI30 125 aaKnown RBP9.35□□□□□ -0.91
USP46-203ENST00000502443 PDZRN3Q9UPQ7 1066 aa9.35□□□□□ -0.91
USP46-203ENST00000502443 MAP3K2Q9Y2U5 619 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms