RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-222ENST00000498801 ZNF511Q8NB15 262 aa10.49□□□□□ -0.73
GARNL3-222ENST00000498801 NFATC2IPQ8NCF5 419 aa10.49□□□□□ -0.73
GARNL3-222ENST00000498801 CARD14Q9BXL6 1004 aa10.49□□□□□ -0.73
GARNL3-222ENST00000498801 MAGEB6P1A0A0J9YX57 407 aa10.48□□□□□ -0.73
GARNL3-222ENST00000498801 FAM174AQ8TBP5 190 aa10.48□□□□□ -0.73
GARNL3-222ENST00000498801 CEP126Q9P2H0 1117 aa10.48□□□□□ -0.73
GARNL3-222ENST00000498801 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.47□□□□□ -0.73
GARNL3-222ENST00000498801 RNF223E7ERA6 249 aa10.47□□□□□ -0.73
GARNL3-222ENST00000498801 BPHLQ86WA6 291 aaPredicted RBP10.47□□□□□ -0.73
GARNL3-222ENST00000498801 FOXJ1Q92949 421 aa10.47□□□□□ -0.73
GARNL3-222ENST00000498801 PLEKHH1Q9ULM0 1364 aa10.47□□□□□ -0.73
GARNL3-222ENST00000498801 ARHGEF28Q8N1W1 1705 aaKnown RBP10.47□□□□□ -0.73
GARNL3-222ENST00000498801 UBAP1LF5GYI3 381 aa10.46□□□□□ -0.73
GARNL3-222ENST00000498801 SKIP12755 728 aa10.46□□□□□ -0.73
GARNL3-222ENST00000498801 AGERQ15109 404 aa10.46□□□□□ -0.73
GARNL3-222ENST00000498801 NBPF8Q3BBV2 869 aa10.46□□□□□ -0.73
GARNL3-222ENST00000498801 C4orf48Q5BLP8 95 aa10.46□□□□□ -0.73
GARNL3-222ENST00000498801 TMEM132EQ6IEE7 984 aa10.46□□□□□ -0.73
GARNL3-222ENST00000498801 TRAIPQ9BWF2 469 aa10.46□□□□□ -0.73
GARNL3-222ENST00000498801 SBNO2Q9Y2G9 1366 aa10.46□□□□□ -0.74
GARNL3-222ENST00000498801 AHDC1Q5TGY3 1603 aaPredicted RBP10.46□□□□□ -0.74
GARNL3-222ENST00000498801 ANKARQ7Z5J8 1434 aa10.45□□□□□ -0.74
GARNL3-222ENST00000498801 USP17L3A6NCW0 530 aa10.45□□□□□ -0.74
GARNL3-222ENST00000498801 USP17L4A6NCW7 530 aa10.45□□□□□ -0.74
GARNL3-222ENST00000498801 USP17L5A8MUK1 530 aa10.45□□□□□ -0.74
GARNL3-222ENST00000498801 GGCXP38435 758 aa10.45□□□□□ -0.74
GARNL3-222ENST00000498801 SLFNL1Q499Z3 407 aa10.45□□□□□ -0.74
GARNL3-222ENST00000498801 ERFEQ4G0M1 354 aa10.45□□□□□ -0.74
GARNL3-222ENST00000498801 USP17L2Q6R6M4 530 aa10.45□□□□□ -0.74
GARNL3-222ENST00000498801 USP17L1Q7RTZ2 530 aa10.45□□□□□ -0.74
GARNL3-222ENST00000498801 DZIP3Q86Y13 1208 aaKnown RBP10.45□□□□□ -0.74
GARNL3-222ENST00000498801 ANKLE1Q8NAG6 615 aa10.45□□□□□ -0.74
GARNL3-222ENST00000498801 C1orf167Q5SNV9 1468 aa10.44□□□□□ -0.74
GARNL3-222ENST00000498801 ROCK2O75116 1388 aaKnown RBP10.44□□□□□ -0.74
GARNL3-222ENST00000498801 ZEB1P37275 1124 aaPredicted RBP10.44□□□□□ -0.74
GARNL3-222ENST00000498801 SH3BP2P78314 561 aa10.44□□□□□ -0.74
GARNL3-222ENST00000498801 PLA2G2CQ5R387 149 aa10.44□□□□□ -0.74
GARNL3-222ENST00000498801 RNF135Q8IUD6 432 aa10.44□□□□□ -0.74
GARNL3-222ENST00000498801 PHTF2Q8N3S3 785 aa10.44□□□□□ -0.74
GARNL3-222ENST00000498801 EIF3AQ14152 1382 aaKnown RBP10.43□□□□□ -0.74
GARNL3-222ENST00000498801 TRIM32Q13049 653 aa10.43□□□□□ -0.74
GARNL3-222ENST00000498801 CDCA8Q53HL2 280 aa10.43□□□□□ -0.74
GARNL3-222ENST00000498801 PLEKHM2Q8IWE5 1019 aa10.43□□□□□ -0.74
GARNL3-222ENST00000498801 C1QTNF2Q9BXJ5 285 aa10.43□□□□□ -0.74
GARNL3-222ENST00000498801 SLAIN2Q9P270 581 aa10.43□□□□□ -0.74
GARNL3-222ENST00000498801 ROBO1Q9Y6N7 1651 aa10.43□□□□□ -0.74
GARNL3-222ENST00000498801 TULP4Q9NRJ4 1543 aa10.43□□□□□ -0.74
GARNL3-222ENST00000498801 FMN2Q9NZ56 1722 aa10.42□□□□□ -0.74
GARNL3-222ENST00000498801 ZBTB24O43167 697 aaPredicted RBP10.42□□□□□ -0.74
GARNL3-222ENST00000498801 ATF3P18847 181 aa10.42□□□□□ -0.74
GARNL3-222ENST00000498801 NBPF1Q3BBV0 1214 aa10.42□□□□□ -0.74
GARNL3-222ENST00000498801 SLC10A4Q96EP9 437 aa10.42□□□□□ -0.74
GARNL3-222ENST00000498801 PRAM1Q96QH2 718 aa10.42□□□□□ -0.74
GARNL3-222ENST00000498801 ATG7O95352 703 aa10.41□□□□□ -0.74
GARNL3-222ENST00000498801 PPP1R18Q6NYC8 613 aa10.41□□□□□ -0.74
GARNL3-222ENST00000498801 WAPLQ7Z5K2 1190 aa10.41□□□□□ -0.74
GARNL3-222ENST00000498801 DEPDC4Q8N2C3 294 aa10.41□□□□□ -0.74
GARNL3-222ENST00000498801 PLPP7Q8NBV4 271 aa10.41□□□□□ -0.74
GARNL3-222ENST00000498801 STK26Q9P289 416 aa10.41□□□□□ -0.74
GARNL3-222ENST00000498801 ATP7BP35670 1465 aa10.41□□□□□ -0.74
GARNL3-222ENST00000498801 COL16A1Q07092 1604 aaPredicted RBP10.4□□□□□ -0.74
GARNL3-222ENST00000498801 NHSL1Q5SYE7 1610 aa10.4□□□□□ -0.74
GARNL3-222ENST00000498801 CSB-PGBD3P0DP91 1061 aa10.4□□□□□ -0.74
GARNL3-222ENST00000498801 BRINP3Q76B58 766 aa10.4□□□□□ -0.74
GARNL3-222ENST00000498801 VRTNQ9H8Y1 702 aa10.4□□□□□ -0.74
GARNL3-222ENST00000498801 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.4□□□□□ -0.74
GARNL3-222ENST00000498801 USTQ9Y2C2 406 aa10.4□□□□□ -0.74
GARNL3-222ENST00000498801 CENPJQ9HC77 1338 aaPredicted RBP10.39□□□□□ -0.75
GARNL3-222ENST00000498801 NCOA4Q13772 614 aa10.39□□□□□ -0.75
GARNL3-222ENST00000498801 TRMT44Q8IYL2 757 aaKnown RBP10.39□□□□□ -0.75
GARNL3-222ENST00000498801 CARD11Q9BXL7 1154 aa10.39□□□□□ -0.75
GARNL3-222ENST00000498801 TRAK1Q9UPV9 953 aa10.39□□□□□ -0.75
GARNL3-222ENST00000498801 USP32Q8NFA0 1604 aa10.39□□□□□ -0.75
GARNL3-222ENST00000498801 KIF1AQ12756 1690 aa10.38□□□□□ -0.75
GARNL3-222ENST00000498801 GIGYF1O75420 1035 aaPredicted RBP10.38□□□□□ -0.75
GARNL3-222ENST00000498801 SKOR1P84550 965 aa10.38□□□□□ -0.75
GARNL3-222ENST00000498801 TOPAZ1Q8N9V7 1692 aa10.38□□□□□ -0.75
GARNL3-222ENST00000498801 WNT7BP56706 349 aa10.37□□□□□ -0.75
GARNL3-222ENST00000498801 PDE4CQ08493 712 aa10.37□□□□□ -0.75
GARNL3-222ENST00000498801 NBPF20Q3BBV1 942 aa10.37□□□□□ -0.75
GARNL3-222ENST00000498801 MAP7D1Q3KQU3 841 aa10.37□□□□□ -0.75
GARNL3-222ENST00000498801 TRAF7Q6Q0C0 670 aa10.37□□□□□ -0.75
GARNL3-222ENST00000498801 POGKQ9P215 609 aa10.37□□□□□ -0.75
GARNL3-222ENST00000498801 PXDNQ92626 1479 aa10.36□□□□□ -0.75
GARNL3-222ENST00000498801 WASLO00401 505 aaPredicted RBP10.36□□□□□ -0.75
GARNL3-222ENST00000498801 RPIAP49247 311 aa10.36□□□□□ -0.75
GARNL3-222ENST00000498801 CCDC85AQ96PX6 553 aaPredicted RBP10.36□□□□□ -0.75
GARNL3-222ENST00000498801 QRICH2Q9H0J4 1663 aa10.36□□□□□ -0.75
GARNL3-222ENST00000498801 SOS2Q07890 1332 aaPredicted RBP10.35□□□□□ -0.75
GARNL3-222ENST00000498801 LZTS3O60299 673 aaPredicted RBP10.35□□□□□ -0.75
GARNL3-222ENST00000498801 HSPA1LP34931 641 aa10.35□□□□□ -0.75
GARNL3-222ENST00000498801 PIP4K2BP78356 416 aa10.35□□□□□ -0.75
GARNL3-222ENST00000498801 MMRN1Q13201 1228 aa10.35□□□□□ -0.75
GARNL3-222ENST00000498801 TSGA10IPQ3SY00 556 aa10.35□□□□□ -0.75
GARNL3-222ENST00000498801 MKRN1Q9UHC7 482 aaKnown RBP10.35□□□□□ -0.75
GARNL3-222ENST00000498801 CDV3Q9UKY7 258 aaKnown RBP10.35□□□□□ -0.75
GARNL3-222ENST00000498801 PRR36Q9H6K5 1346 aa10.34□□□□□ -0.75
GARNL3-222ENST00000498801 ESPNB1AK53 854 aa10.34□□□□□ -0.75
GARNL3-222ENST00000498801 ELOAQ14241 798 aaKnown RBP10.34□□□□□ -0.75
GARNL3-222ENST00000498801 EML3Q32P44 896 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms