RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 IGSF5Q9NSI5 407 aa5.05□□□□□ -1.6
CLTC-209ENST00000498711 LZTS3O60299 673 aaPredicted RBP5.05□□□□□ -1.6
CLTC-209ENST00000498711 PUS10Q3MIT2 529 aaKnown RBP5.05□□□□□ -1.6
CLTC-209ENST00000498711 PUS7Q96PZ0 661 aaKnown RBP5.05□□□□□ -1.6
CLTC-209ENST00000498711 USB1Q9BQ65 265 aaKnown RBP5.05□□□□□ -1.6
CLTC-209ENST00000498711 KNDC1Q76NI1 1749 aa5.05□□□□□ -1.6
CLTC-209ENST00000498711 XRN1Q8IZH2 1706 aaKnown RBP5.05□□□□□ -1.6
CLTC-209ENST00000498711 ARHGAP33O14559 1287 aa5.04□□□□□ -1.6
CLTC-209ENST00000498711 ACTN4O43707 911 aaKnown RBP5.04□□□□□ -1.6
CLTC-209ENST00000498711 PLIN1O60240 522 aa5.04□□□□□ -1.6
CLTC-209ENST00000498711 PDE3AQ14432 1141 aa5.04□□□□□ -1.6
CLTC-209ENST00000498711 MRRFQ96E11 262 aaKnown RBP5.04□□□□□ -1.6
CLTC-209ENST00000498711 CDCA7Q9BWT1 371 aaPredicted RBP5.04□□□□□ -1.6
CLTC-209ENST00000498711 SLAIN2Q9P270 581 aa5.04□□□□□ -1.6
CLTC-209ENST00000498711 ATP2B4P23634 1241 aa5.04□□□□□ -1.6
CLTC-209ENST00000498711 SWI5Q1ZZU3 235 aa5.04□□□□□ -1.6
CLTC-209ENST00000498711 LCE2DQ5TA82 110 aaPredicted RBP5.04□□□□□ -1.6
CLTC-209ENST00000498711 CHD2O14647 1828 aaKnown RBP5.04□□□□□ -1.6
CLTC-209ENST00000498711 ZFYVE9O95405 1425 aa5.04□□□□□ -1.6
CLTC-209ENST00000498711 MCCD1P59942 119 aaPredicted RBP5.03□□□□□ -1.6
CLTC-209ENST00000498711 NFKBIBQ15653 356 aa5.03□□□□□ -1.6
CLTC-209ENST00000498711 PTPRNQ16849 979 aa5.03□□□□□ -1.6
CLTC-209ENST00000498711 CC2D1BQ5T0F9 858 aaKnown RBP5.03□□□□□ -1.6
CLTC-209ENST00000498711 RNF19BQ6ZMZ0 732 aa5.03□□□□□ -1.6
CLTC-209ENST00000498711 ANKMY2Q8IV38 441 aa5.03□□□□□ -1.6
CLTC-209ENST00000498711 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.03□□□□□ -1.6
CLTC-209ENST00000498711 SIRT1Q96EB6 747 aa5.03□□□□□ -1.6
CLTC-209ENST00000498711 POLR3GLQ9BT43 218 aa5.03□□□□□ -1.6
CLTC-209ENST00000498711 PRR14Q9BWN1 585 aa5.03□□□□□ -1.6
CLTC-209ENST00000498711 MAP10Q9P2G4 905 aa5.03□□□□□ -1.6
CLTC-209ENST00000498711 CEP126Q9P2H0 1117 aa5.03□□□□□ -1.6
CLTC-209ENST00000498711 GPSM3Q9Y4H4 160 aa5.03□□□□□ -1.6
CLTC-209ENST00000498711 XIRP1Q702N8 1843 aaKnown RBP5.03□□□□□ -1.6
CLTC-209ENST00000498711 KIF1BO60333 1816 aa5.03□□□□□ -1.6
CLTC-209ENST00000498711 NEFMP07197 916 aa5.03□□□□□ -1.6
CLTC-209ENST00000498711 SERPINB4P48594 390 aa5.03□□□□□ -1.6
CLTC-209ENST00000498711 RNF135Q8IUD6 432 aa5.03□□□□□ -1.6
CLTC-209ENST00000498711 PLPP7Q8NBV4 271 aa5.03□□□□□ -1.6
CLTC-209ENST00000498711 BCL2L13Q9BXK5 485 aa5.03□□□□□ -1.6
CLTC-209ENST00000498711 NBPF3Q9H094 633 aa5.03□□□□□ -1.6
CLTC-209ENST00000498711 DCCP43146 1447 aa5.03□□□□□ -1.6
CLTC-209ENST00000498711 MARSP56192 900 aaKnown RBP5.03□□□□□ -1.6
CLTC-209ENST00000498711 KIAA1522Q9P206 1035 aaPredicted RBP5.03□□□□□ -1.6
CLTC-209ENST00000498711 SALL2Q9Y467 1007 aaPredicted RBP5.03□□□□□ -1.6
CLTC-209ENST00000498711 ADGRB2O60241 1585 aa5.02□□□□□ -1.61
CLTC-209ENST00000498711 SETD1AO15047 1707 aaKnown RBP5.02□□□□□ -1.61
CLTC-209ENST00000498711 STRCP1A6NGW2 1772 aa5.02□□□□□ -1.61
CLTC-209ENST00000498711 ZNF16P17020 682 aaPredicted RBP5.02□□□□□ -1.61
CLTC-209ENST00000498711 PTK2Q05397 1052 aa5.02□□□□□ -1.61
CLTC-209ENST00000498711 EML3Q32P44 896 aa5.02□□□□□ -1.61
CLTC-209ENST00000498711 BLOC1S3Q6QNY0 202 aa5.02□□□□□ -1.61
CLTC-209ENST00000498711 KNSTRNQ9Y448 316 aa5.02□□□□□ -1.61
CLTC-209ENST00000498711 ADGRB1O14514 1584 aa5.02□□□□□ -1.61
CLTC-209ENST00000498711 PLEKHG1Q9ULL1 1385 aa5.02□□□□□ -1.61
CLTC-209ENST00000498711 DMRTA1Q5VZB9 504 aa5.02□□□□□ -1.61
CLTC-209ENST00000498711 THEMISQ8N1K5 641 aaPredicted RBP5.02□□□□□ -1.61
CLTC-209ENST00000498711 C1orf216Q8TAB5 229 aa5.02□□□□□ -1.61
CLTC-209ENST00000498711 SLC52A1Q9NWF4 448 aa5.02□□□□□ -1.61
CLTC-209ENST00000498711 BIN2Q9UBW5 565 aaPredicted RBP5.02□□□□□ -1.61
CLTC-209ENST00000498711 VPS9D1Q9Y2B5 631 aa5.02□□□□□ -1.61
CLTC-209ENST00000498711 JUNDP17535 347 aa5.01□□□□□ -1.61
CLTC-209ENST00000498711 DPYDQ12882 1025 aa5.01□□□□□ -1.61
CLTC-209ENST00000498711 MAP7D1Q3KQU3 841 aa5.01□□□□□ -1.61
CLTC-209ENST00000498711 OGFOD1Q8N543 542 aa5.01□□□□□ -1.61
CLTC-209ENST00000498711 ARMC2Q8NEN0 867 aa5.01□□□□□ -1.61
CLTC-209ENST00000498711 GPKOWQ92917 476 aaPredicted RBP eCLIP5.01□□□□□ -1.61
CLTC-209ENST00000498711 ZFRQ96KR1 1074 aaKnown RBP5.01□□□□□ -1.61
CLTC-209ENST00000498711 CARD14Q9BXL6 1004 aa5.01□□□□□ -1.61
CLTC-209ENST00000498711 CGNL1Q0VF96 1302 aa5.01□□□□□ -1.61
CLTC-209ENST00000498711 TMEM2Q9UHN6 1383 aa5.01□□□□□ -1.61
CLTC-209ENST00000498711 PPLO60437 1756 aa5.01□□□□□ -1.61
CLTC-209ENST00000498711 RGL3Q3MIN7 710 aa5.01□□□□□ -1.61
CLTC-209ENST00000498711 NOM1Q5C9Z4 860 aaKnown RBP5.01□□□□□ -1.61
CLTC-209ENST00000498711 PDXDC2PQ6P474 469 aa5.01□□□□□ -1.61
CLTC-209ENST00000498711 BRICD5Q6PL45 260 aa5.01□□□□□ -1.61
CLTC-209ENST00000498711 TRIM50Q86XT4 487 aa5.01□□□□□ -1.61
CLTC-209ENST00000498711 PHTF2Q8N3S3 785 aa5.01□□□□□ -1.61
CLTC-209ENST00000498711 PCDHB9Q9Y5E1 797 aa5.01□□□□□ -1.61
CLTC-209ENST00000498711 AHDC1Q5TGY3 1603 aaPredicted RBP5.01□□□□□ -1.61
CLTC-209ENST00000498711 NRXN3Q9Y4C0 1643 aa5.01□□□□□ -1.61
CLTC-209ENST00000498711 IGHDP01880 384 aa5□□□□□ -1.61
CLTC-209ENST00000498711 CTHP32929 405 aa5□□□□□ -1.61
CLTC-209ENST00000498711 ATP1A2P50993 1020 aa5□□□□□ -1.61
CLTC-209ENST00000498711 KCNH2Q12809 1159 aa5□□□□□ -1.61
CLTC-209ENST00000498711 WDR63Q8IWG1 891 aa5□□□□□ -1.61
CLTC-209ENST00000498711 LRCH3Q96II8 777 aa5□□□□□ -1.61
CLTC-209ENST00000498711 ANTXR1Q9H6X2 564 aa5□□□□□ -1.61
CLTC-209ENST00000498711 LRRC7Q96NW7 1537 aa5□□□□□ -1.61
CLTC-209ENST00000498711 MAPK8IP3Q9UPT6 1336 aa5□□□□□ -1.61
CLTC-209ENST00000498711 FMNL1O95466 1100 aaPredicted RBP5□□□□□ -1.61
CLTC-209ENST00000498711 CLDN10P78369 228 aa5□□□□□ -1.61
CLTC-209ENST00000498711 WDR43Q15061 677 aaKnown RBP eCLIP5□□□□□ -1.61
CLTC-209ENST00000498711 GIPC2Q8TF65 315 aa5□□□□□ -1.61
CLTC-209ENST00000498711 FAM163AQ96GL9 167 aaPredicted RBP5□□□□□ -1.61
CLTC-209ENST00000498711 ZNF594Q96JF6 807 aaPredicted RBP5□□□□□ -1.61
CLTC-209ENST00000498711 LAS1LQ9Y4W2 734 aaKnown RBP5□□□□□ -1.61
CLTC-209ENST00000498711 MYO5BQ9ULV0 1848 aa5□□□□□ -1.61
CLTC-209ENST00000498711 NEXMIFQ5QGS0 1516 aa5□□□□□ -1.61
CLTC-209ENST00000498711 KIF3BO15066 747 aa5□□□□□ -1.61
CLTC-209ENST00000498711 PBX2P40425 430 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms