RNA–Protein interactions for RNA: ENST00000498613.1

TMEM39B-209, Transcript of transmembrane protein 39B, humanhuman

TSL 3

Gene TMEM39B, Length 854 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-209ENST00000498613 ANKRD13DQ6ZTN6 518 aa16.3■□□□□ 0.2
TMEM39B-209ENST00000498613 YTHDC1Q96MU7 727 aaKnown RBP16.3■□□□□ 0.2
TMEM39B-209ENST00000498613 SETDB2Q96T68 719 aa16.3■□□□□ 0.2
TMEM39B-209ENST00000498613 PDIA6Q15084 440 aa16.29■□□□□ 0.2
TMEM39B-209ENST00000498613 MSL1Q68DK7 614 aa16.29■□□□□ 0.2
TMEM39B-209ENST00000498613 RIC3Q7Z5B4 369 aa16.29■□□□□ 0.2
TMEM39B-209ENST00000498613 AMIGO3Q86WK7 504 aa16.29■□□□□ 0.2
TMEM39B-209ENST00000498613 XAGE3Q8WTP9 111 aa16.29■□□□□ 0.2
TMEM39B-209ENST00000498613 SRP68Q9UHB9 627 aaKnown RBP16.29■□□□□ 0.2
TMEM39B-209ENST00000498613 GOLGB1Q14789 3259 aaKnown RBP16.29■□□□□ 0.2
TMEM39B-209ENST00000498613 MAP3K15Q6ZN16 1313 aa16.28■□□□□ 0.2
TMEM39B-209ENST00000498613 ANXA1P04083 346 aa16.28■□□□□ 0.2
TMEM39B-209ENST00000498613 FHDC1Q9C0D6 1143 aaPredicted RBP16.28■□□□□ 0.2
TMEM39B-209ENST00000498613 UBR3Q6ZT12 1888 aa16.28■□□□□ 0.2
TMEM39B-209ENST00000498613 CAMTA2O94983 1202 aa16.27■□□□□ 0.2
TMEM39B-209ENST00000498613 MMP10P09238 476 aa16.27■□□□□ 0.2
TMEM39B-209ENST00000498613 FKBP8Q14318 412 aa16.27■□□□□ 0.2
TMEM39B-209ENST00000498613 ALDH1L2Q3SY69 923 aa16.27■□□□□ 0.2
TMEM39B-209ENST00000498613 BICDL1Q6ZP65 573 aa16.27■□□□□ 0.2
TMEM39B-209ENST00000498613 PLBD2Q8NHP8 589 aa16.27■□□□□ 0.2
TMEM39B-209ENST00000498613 SGIP1Q9BQI5 828 aa16.27■□□□□ 0.2
TMEM39B-209ENST00000498613 SYT17Q9BSW7 474 aa16.27■□□□□ 0.2
TMEM39B-209ENST00000498613 ZBTB3Q9H5J0 574 aa16.27■□□□□ 0.2
TMEM39B-209ENST00000498613 QSER1Q2KHR3 1735 aa16.27■□□□□ 0.19
TMEM39B-209ENST00000498613 TCERG1O14776 1098 aaKnown RBP16.26■□□□□ 0.19
TMEM39B-209ENST00000498613 GTF2E1P29083 439 aaPredicted RBP16.26■□□□□ 0.19
TMEM39B-209ENST00000498613 PROSER3Q2NL68 480 aa16.26■□□□□ 0.19
TMEM39B-209ENST00000498613 TTLL7Q6ZT98 887 aa16.26■□□□□ 0.19
TMEM39B-209ENST00000498613 NEXNQ0ZGT2 675 aa16.25■□□□□ 0.19
TMEM39B-209ENST00000498613 TPTE2Q6XPS3 522 aa16.25■□□□□ 0.19
TMEM39B-209ENST00000498613 GIGYF2Q6Y7W6 1299 aaKnown RBP16.25■□□□□ 0.19
TMEM39B-209ENST00000498613 NIP7Q9Y221 180 aaKnown RBP eCLIP16.25■□□□□ 0.19
TMEM39B-209ENST00000498613 LAMB4A4D0S4 1761 aa16.25■□□□□ 0.19
TMEM39B-209ENST00000498613 TM4SF1P30408 202 aa16.24■□□□□ 0.19
TMEM39B-209ENST00000498613 FKBP5Q13451 457 aaPredicted RBP16.24■□□□□ 0.19
TMEM39B-209ENST00000498613 KSR2Q6VAB6 950 aa16.24■□□□□ 0.19
TMEM39B-209ENST00000498613 PPP1R42Q7Z4L9 355 aa16.24■□□□□ 0.19
TMEM39B-209ENST00000498613 PHAXQ9H814 394 aaKnown RBP16.24■□□□□ 0.19
TMEM39B-209ENST00000498613 CEP350Q5VT06 3117 aa16.24■□□□□ 0.19
TMEM39B-209ENST00000498613 IPO8O15397 1037 aaKnown RBP16.23■□□□□ 0.19
TMEM39B-209ENST00000498613 TCIRG1Q13488 830 aa16.23■□□□□ 0.19
TMEM39B-209ENST00000498613 NFIXQ14938 502 aa16.23■□□□□ 0.19
TMEM39B-209ENST00000498613 PARP10Q53GL7 1025 aa16.23■□□□□ 0.19
TMEM39B-209ENST00000498613 NBPF5PQ86XG9 351 aaPredicted RBP16.23■□□□□ 0.19
TMEM39B-209ENST00000498613 KLHL34Q8N239 644 aa16.23■□□□□ 0.19
TMEM39B-209ENST00000498613 NYXQ9GZU5 481 aa16.23■□□□□ 0.19
TMEM39B-209ENST00000498613 SMC4Q9NTJ3 1288 aa16.23■□□□□ 0.19
TMEM39B-209ENST00000498613 SERPINB2P05120 415 aa16.22■□□□□ 0.19
TMEM39B-209ENST00000498613 C1QTNF8P60827 252 aa16.22■□□□□ 0.19
TMEM39B-209ENST00000498613 FLIIQ13045 1269 aa16.22■□□□□ 0.19
TMEM39B-209ENST00000498613 TBC1D9BQ66K14 1250 aa16.22■□□□□ 0.19
TMEM39B-209ENST00000498613 LRP10Q7Z4F1 713 aa16.22■□□□□ 0.19
TMEM39B-209ENST00000498613 BCL2L12Q9HB09 334 aa16.22■□□□□ 0.19
TMEM39B-209ENST00000498613 HSP90B1P14625 803 aaKnown RBP16.21■□□□□ 0.19
TMEM39B-209ENST00000498613 HLFQ16534 295 aa16.21■□□□□ 0.19
TMEM39B-209ENST00000498613 COL24A1Q17RW2 1714 aa16.2■□□□□ 0.18
TMEM39B-209ENST00000498613 PI4KAP2A4QPH2 592 aa16.2■□□□□ 0.18
TMEM39B-209ENST00000498613 ST5P78524 1137 aa16.2■□□□□ 0.18
TMEM39B-209ENST00000498613 PI4KAP1Q8N8J0 262 aa16.2■□□□□ 0.18
TMEM39B-209ENST00000498613 SSH1Q8WYL5 1049 aa16.2■□□□□ 0.18
TMEM39B-209ENST00000498613 MAP3K2Q9Y2U5 619 aa16.2■□□□□ 0.18
TMEM39B-209ENST00000498613 CD2APQ9Y5K6 639 aa16.2■□□□□ 0.18
TMEM39B-209ENST00000498613 CARMIL3Q8ND23 1372 aa16.2■□□□□ 0.18
TMEM39B-209ENST00000498613 PTPRCP08575 1304 aa16.19■□□□□ 0.18
TMEM39B-209ENST00000498613 TUBGCP6Q96RT7 1819 aa16.19■□□□□ 0.18
TMEM39B-209ENST00000498613 CACNA1FO60840 1977 aa16.19■□□□□ 0.18
TMEM39B-209ENST00000498613 POLRMTO00411 1230 aaKnown RBP16.19■□□□□ 0.18
TMEM39B-209ENST00000498613 GPTP24298 496 aa16.19■□□□□ 0.18
TMEM39B-209ENST00000498613 ZNF34Q8IZ26 560 aa16.19■□□□□ 0.18
TMEM39B-209ENST00000498613 MRPL50Q8N5N7 158 aaKnown RBP16.19■□□□□ 0.18
TMEM39B-209ENST00000498613 CNBD1Q8NA66 436 aa16.19■□□□□ 0.18
TMEM39B-209ENST00000498613 METTL22Q9BUU2 404 aaPredicted RBP16.19■□□□□ 0.18
TMEM39B-209ENST00000498613 UTP14AQ9BVJ6 771 aaKnown RBP16.19■□□□□ 0.18
TMEM39B-209ENST00000498613 PDZRN3Q9UPQ7 1066 aa16.19■□□□□ 0.18
TMEM39B-209ENST00000498613 FAM177BA6PVY3 158 aa16.18■□□□□ 0.18
TMEM39B-209ENST00000498613 RARSP54136 660 aaKnown RBP16.18■□□□□ 0.18
TMEM39B-209ENST00000498613 G2E3Q7L622 706 aa16.18■□□□□ 0.18
TMEM39B-209ENST00000498613 DNAAF4Q8WXU2 420 aa16.18■□□□□ 0.18
TMEM39B-209ENST00000498613 PDE6BP35913 854 aa16.17■□□□□ 0.18
TMEM39B-209ENST00000498613 TRIM28Q13263 835 aaKnown RBP16.17■□□□□ 0.18
TMEM39B-209ENST00000498613 CCDC191Q8NCU4 936 aa16.17■□□□□ 0.18
TMEM39B-209ENST00000498613 MYD88Q99836 296 aa16.17■□□□□ 0.18
TMEM39B-209ENST00000498613 BCL2L13Q9BXK5 485 aa16.17■□□□□ 0.18
TMEM39B-209ENST00000498613 API5Q9BZZ5 524 aaKnown RBP16.17■□□□□ 0.18
TMEM39B-209ENST00000498613 TRMT112Q9UI30 125 aaKnown RBP16.17■□□□□ 0.18
TMEM39B-209ENST00000498613 KIF16BQ96L93 1317 aa16.17■□□□□ 0.18
TMEM39B-209ENST00000498613 BRPF1P55201 1214 aaPredicted RBP16.16■□□□□ 0.18
TMEM39B-209ENST00000498613 TGFB2P61812 414 aa16.16■□□□□ 0.18
TMEM39B-209ENST00000498613 DDR1Q08345 913 aa16.16■□□□□ 0.18
TMEM39B-209ENST00000498613 ARHGAP45Q92619 1136 aa16.16■□□□□ 0.18
TMEM39B-209ENST00000498613 RNF123Q5XPI4 1314 aa16.16■□□□□ 0.18
TMEM39B-209ENST00000498613 ATP5J2-PTCD1G3V325 749 aa16.15■□□□□ 0.18
TMEM39B-209ENST00000498613 SLC4A10Q6U841 1118 aa16.15■□□□□ 0.18
TMEM39B-209ENST00000498613 LINS1Q8NG48 757 aa16.15■□□□□ 0.18
TMEM39B-209ENST00000498613 FRAT1Q92837 279 aaPredicted RBP16.15■□□□□ 0.18
TMEM39B-209ENST00000498613 BRIP1Q9BX63 1249 aa16.15■□□□□ 0.18
TMEM39B-209ENST00000498613 CWC25Q9NXE8 425 aaPredicted RBP16.15■□□□□ 0.18
TMEM39B-209ENST00000498613 ATP10DQ9P241 1426 aa16.15■□□□□ 0.18
TMEM39B-209ENST00000498613 NOB1Q9ULX3 412 aaKnown RBP16.15■□□□□ 0.18
TMEM39B-209ENST00000498613 C4AP0C0L4 1744 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms