RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 LMOD3Q0VAK6 560 aa19.06■□□□□ 0.64
HDLBP-247ENST00000498595 SOGA3Q5TF21 947 aa19.06■□□□□ 0.64
HDLBP-247ENST00000498595 STYK1Q6J9G0 422 aa19.06■□□□□ 0.64
HDLBP-247ENST00000498595 KIF6Q6ZMV9 814 aa19.06■□□□□ 0.64
HDLBP-247ENST00000498595 MASTLQ96GX5 879 aa19.06■□□□□ 0.64
HDLBP-247ENST00000498595 THUMPD2Q9BTF0 503 aaKnown RBP19.06■□□□□ 0.64
HDLBP-247ENST00000498595 ZNF219Q9P2Y4 722 aaPredicted RBP19.06■□□□□ 0.64
HDLBP-247ENST00000498595 DLEC1Q9Y238 1755 aa19.06■□□□□ 0.64
HDLBP-247ENST00000498595 MYBBP1AQ9BQG0 1328 aaKnown RBP19.05■□□□□ 0.64
HDLBP-247ENST00000498595 APLP1P51693 650 aa19.05■□□□□ 0.64
HDLBP-247ENST00000498595 EIF4A1P60842 406 aaKnown RBP19.05■□□□□ 0.64
HDLBP-247ENST00000498595 NGEFQ8N5V2 710 aa19.05■□□□□ 0.64
HDLBP-247ENST00000498595 RBM46Q8TBY0 533 aaKnown RBP19.05■□□□□ 0.64
HDLBP-247ENST00000498595 BCORQ6W2J9 1755 aa19.04■□□□□ 0.64
HDLBP-247ENST00000498595 SRGNP10124 158 aa19.04■□□□□ 0.64
HDLBP-247ENST00000498595 RIPK4P57078 832 aa19.04■□□□□ 0.64
HDLBP-247ENST00000498595 RRAGCQ9HB90 399 aa19.04■□□□□ 0.64
HDLBP-247ENST00000498595 TSPYL4Q9UJ04 414 aa19.04■□□□□ 0.64
HDLBP-247ENST00000498595 RRP7AQ9Y3A4 280 aaKnown RBP19.04■□□□□ 0.64
HDLBP-247ENST00000498595 FAM177BA6PVY3 158 aa19.03■□□□□ 0.64
HDLBP-247ENST00000498595 NFKBIEO00221 500 aa19.03■□□□□ 0.64
HDLBP-247ENST00000498595 WDR43Q15061 677 aaKnown RBP eCLIP19.03■□□□□ 0.64
HDLBP-247ENST00000498595 PRPF40BQ6NWY9 871 aaKnown RBP19.03■□□□□ 0.64
HDLBP-247ENST00000498595 NPR1P16066 1061 aa19.02■□□□□ 0.64
HDLBP-247ENST00000498595 DPY19L2Q6NUT2 758 aa19.02■□□□□ 0.64
HDLBP-247ENST00000498595 NYXQ9GZU5 481 aa19.02■□□□□ 0.64
HDLBP-247ENST00000498595 GLTPD2A6NH11 291 aa19.01■□□□□ 0.63
HDLBP-247ENST00000498595 ERVV-1B6SEH8 477 aa19.01■□□□□ 0.63
HDLBP-247ENST00000498595 MYL6BP14649 208 aa19.01■□□□□ 0.63
HDLBP-247ENST00000498595 FSTL1Q12841 308 aa19.01■□□□□ 0.63
HDLBP-247ENST00000498595 TAOK3Q9H2K8 898 aa19.01■□□□□ 0.63
HDLBP-247ENST00000498595 LAMB4A4D0S4 1761 aa19.01■□□□□ 0.63
HDLBP-247ENST00000498595 ERBB4Q15303 1308 aa19■□□□□ 0.63
HDLBP-247ENST00000498595 HLFQ16534 295 aa19■□□□□ 0.63
HDLBP-247ENST00000498595 ERFEQ4G0M1 354 aa19■□□□□ 0.63
HDLBP-247ENST00000498595 BABAM1Q9NWV8 329 aa19■□□□□ 0.63
HDLBP-247ENST00000498595 ANKRD31Q8N7Z5 1873 aa19■□□□□ 0.63
HDLBP-247ENST00000498595 MAP3K15Q6ZN16 1313 aa19■□□□□ 0.63
HDLBP-247ENST00000498595 VEGFAP15692 232 aaPredicted RBP18.99■□□□□ 0.63
HDLBP-247ENST00000498595 TMPOP42166 694 aaKnown RBP18.99■□□□□ 0.63
HDLBP-247ENST00000498595 DLG5Q8TDM6 1919 aa18.99■□□□□ 0.63
HDLBP-247ENST00000498595 LTBP3Q9NS15 1303 aa18.99■□□□□ 0.63
HDLBP-247ENST00000498595 KDM3BQ7LBC6 1761 aa18.98■□□□□ 0.63
HDLBP-247ENST00000498595 TNRC6CQ9HCJ0 1690 aaKnown RBP18.98■□□□□ 0.63
HDLBP-247ENST00000498595 COL11A2P13942 1736 aaPredicted RBP18.98■□□□□ 0.63
HDLBP-247ENST00000498595 CCDC93Q567U6 631 aa18.98■□□□□ 0.63
HDLBP-247ENST00000498595 SBF1O95248 1867 aa18.97■□□□□ 0.63
HDLBP-247ENST00000498595 ALDH1B1P30837 517 aa18.97■□□□□ 0.63
HDLBP-247ENST00000498595 PRELPP51888 382 aa18.97■□□□□ 0.63
HDLBP-247ENST00000498595 NEUROD2Q15784 382 aa18.97■□□□□ 0.63
HDLBP-247ENST00000498595 SMC1BQ8NDV3 1235 aa18.97■□□□□ 0.63
HDLBP-247ENST00000498595 KLRG2A4D1S0 409 aaPredicted RBP18.96■□□□□ 0.63
HDLBP-247ENST00000498595 EIF2S2P20042 333 aaKnown RBP18.96■□□□□ 0.63
HDLBP-247ENST00000498595 TTLL7Q6ZT98 887 aa18.96■□□□□ 0.63
HDLBP-247ENST00000498595 CCDC146Q8IYE0 955 aa18.96■□□□□ 0.63
HDLBP-247ENST00000498595 RUNDC1Q96C34 613 aa18.96■□□□□ 0.63
HDLBP-247ENST00000498595 ZBTB3Q9H5J0 574 aa18.96■□□□□ 0.63
HDLBP-247ENST00000498595 GPTP24298 496 aa18.95■□□□□ 0.62
HDLBP-247ENST00000498595 CEP350Q5VT06 3117 aa18.95■□□□□ 0.62
HDLBP-247ENST00000498595 RTKN2Q8IZC4 609 aa18.94■□□□□ 0.62
HDLBP-247ENST00000498595 RPGRQ92834 1020 aaKnown RBP18.94■□□□□ 0.62
HDLBP-247ENST00000498595 PPP1R42Q7Z4L9 355 aa18.93■□□□□ 0.62
HDLBP-247ENST00000498595 NUTM1Q86Y26 1132 aa18.93■□□□□ 0.62
HDLBP-247ENST00000498595 LAS1LQ9Y4W2 734 aaKnown RBP18.93■□□□□ 0.62
HDLBP-247ENST00000498595 TIAM2Q8IVF5 1701 aa18.93■□□□□ 0.62
HDLBP-247ENST00000498595 IBTKQ9P2D0 1353 aaPredicted RBP18.93■□□□□ 0.62
HDLBP-247ENST00000498595 GIGYF2Q6Y7W6 1299 aaKnown RBP18.92■□□□□ 0.62
HDLBP-247ENST00000498595 FKBP4Q02790 459 aaKnown RBP eCLIP18.91■□□□□ 0.62
HDLBP-247ENST00000498595 PARP10Q53GL7 1025 aa18.91■□□□□ 0.62
HDLBP-247ENST00000498595 C7orf43Q8WVR3 580 aa18.91■□□□□ 0.62
HDLBP-247ENST00000498595 SLX4Q8IY92 1834 aa18.9■□□□□ 0.62
HDLBP-247ENST00000498595 ARFGEF2Q9Y6D5 1785 aa18.89■□□□□ 0.61
HDLBP-247ENST00000498595 FER1L6Q2WGJ9 1857 aa18.89■□□□□ 0.61
HDLBP-247ENST00000498595 CRY2Q49AN0 593 aa18.89■□□□□ 0.61
HDLBP-247ENST00000498595 HSP90AB3PQ58FF7 597 aa18.89■□□□□ 0.61
HDLBP-247ENST00000498595 SUSD4Q5VX71 490 aa18.89■□□□□ 0.61
HDLBP-247ENST00000498595 CC2D2BQ6DHV5 1058 aa18.89■□□□□ 0.61
HDLBP-247ENST00000498595 ZNF34Q8IZ26 560 aa18.89■□□□□ 0.61
HDLBP-247ENST00000498595 NECTIN2Q92692 538 aa18.89■□□□□ 0.61
HDLBP-247ENST00000498595 RBM17Q96I25 401 aaKnown RBP18.89■□□□□ 0.61
HDLBP-247ENST00000498595 TMX4Q9H1E5 349 aaPredicted RBP18.89■□□□□ 0.61
HDLBP-247ENST00000498595 PRKRIP1Q9H875 184 aaPredicted RBP18.89■□□□□ 0.61
HDLBP-247ENST00000498595 ADAMTS8Q9UP79 889 aa18.89■□□□□ 0.61
HDLBP-247ENST00000498595 ABCC12Q96J65 1359 aa18.89■□□□□ 0.61
HDLBP-247ENST00000498595 ZNF277Q9NRM2 450 aaPredicted RBP18.88■□□□□ 0.61
HDLBP-247ENST00000498595 UBN2Q6ZU65 1347 aa18.88■□□□□ 0.61
HDLBP-247ENST00000498595 RIC1Q4ADV7 1423 aa18.88■□□□□ 0.61
HDLBP-247ENST00000498595 IQCA1LA6NCM1 817 aa18.87■□□□□ 0.61
HDLBP-247ENST00000498595 CHL1O00533 1208 aa18.87■□□□□ 0.61
HDLBP-247ENST00000498595 DDNO94850 711 aaPredicted RBP18.87■□□□□ 0.61
HDLBP-247ENST00000498595 AIMP1Q12904 312 aaKnown RBP18.87■□□□□ 0.61
HDLBP-247ENST00000498595 CACNA1SQ13698 1873 aa18.87■□□□□ 0.61
HDLBP-247ENST00000498595 PDIA6Q15084 440 aa18.87■□□□□ 0.61
HDLBP-247ENST00000498595 GRIPAP1Q4V328 841 aa18.87■□□□□ 0.61
HDLBP-247ENST00000498595 NLRP3Q96P20 1036 aa18.87■□□□□ 0.61
HDLBP-247ENST00000498595 UTP14AQ9BVJ6 771 aaKnown RBP18.87■□□□□ 0.61
HDLBP-247ENST00000498595 NTSR2O95665 410 aa18.86■□□□□ 0.61
HDLBP-247ENST00000498595 ANXA1P04083 346 aa18.86■□□□□ 0.61
HDLBP-247ENST00000498595 HOXA10P31260 410 aaPredicted RBP18.86■□□□□ 0.61
HDLBP-247ENST00000498595 PROSER3Q2NL68 480 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms