RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 C1QTNF8P60827 252 aa11.16□□□□□ -0.62
HMGXB4-207ENST00000498212 EIF4A1P60842 406 aaKnown RBP11.16□□□□□ -0.62
HMGXB4-207ENST00000498212 LMOD3Q0VAK6 560 aa11.16□□□□□ -0.62
HMGXB4-207ENST00000498212 SETDB2Q96T68 719 aa11.16□□□□□ -0.62
HMGXB4-207ENST00000498212 PRKRIP1Q9H875 184 aaPredicted RBP11.16□□□□□ -0.62
HMGXB4-207ENST00000498212 GPBP1L1Q9HC44 474 aaPredicted RBP11.16□□□□□ -0.62
HMGXB4-207ENST00000498212 NBPF26B4DH59 902 aa11.15□□□□□ -0.62
HMGXB4-207ENST00000498212 NPHP1O15259 732 aa11.15□□□□□ -0.62
HMGXB4-207ENST00000498212 PRR5LQ6MZQ0 368 aa11.15□□□□□ -0.62
HMGXB4-207ENST00000498212 NBPF10Q6P3W6 841 aaKnown RBP11.15□□□□□ -0.62
HMGXB4-207ENST00000498212 CLEC4GQ6UXB4 293 aa11.15□□□□□ -0.62
HMGXB4-207ENST00000498212 C2CD5Q86YS7 1000 aa11.15□□□□□ -0.62
HMGXB4-207ENST00000498212 CCDC146Q8IYE0 955 aa11.15□□□□□ -0.62
HMGXB4-207ENST00000498212 NBPF15Q8N660 670 aa11.15□□□□□ -0.62
HMGXB4-207ENST00000498212 ZNF526Q8TF50 670 aaPredicted RBP11.15□□□□□ -0.62
HMGXB4-207ENST00000498212 ZNF652Q9Y2D9 606 aa11.15□□□□□ -0.62
HMGXB4-207ENST00000498212 DICER1Q9UPY3 1922 aaKnown RBP11.15□□□□□ -0.62
HMGXB4-207ENST00000498212 TIAM2Q8IVF5 1701 aa11.15□□□□□ -0.63
HMGXB4-207ENST00000498212 FER1L6Q2WGJ9 1857 aa11.15□□□□□ -0.63
HMGXB4-207ENST00000498212 H0YIN7 160 aa11.14□□□□□ -0.63
HMGXB4-207ENST00000498212 CNBD1Q8NA66 436 aa11.14□□□□□ -0.63
HMGXB4-207ENST00000498212 RUNDC1Q96C34 613 aa11.14□□□□□ -0.63
HMGXB4-207ENST00000498212 BRIP1Q9BX63 1249 aa11.14□□□□□ -0.63
HMGXB4-207ENST00000498212 TSPYL4Q9UJ04 414 aa11.14□□□□□ -0.63
HMGXB4-207ENST00000498212 ANKRD36CQ5JPF3 1778 aa11.13□□□□□ -0.63
HMGXB4-207ENST00000498212 RGL2O15211 777 aa11.13□□□□□ -0.63
HMGXB4-207ENST00000498212 PDE6BP35913 854 aa11.13□□□□□ -0.63
HMGXB4-207ENST00000498212 ST5P78524 1137 aa11.13□□□□□ -0.63
HMGXB4-207ENST00000498212 NEUROD2Q15784 382 aa11.13□□□□□ -0.63
HMGXB4-207ENST00000498212 CCDC24Q8N4L8 307 aa11.13□□□□□ -0.63
HMGXB4-207ENST00000498212 TTLL6Q8N841 843 aa11.13□□□□□ -0.63
HMGXB4-207ENST00000498212 BABAM1Q9NWV8 329 aa11.13□□□□□ -0.63
HMGXB4-207ENST00000498212 ADAMTS8Q9UP79 889 aa11.13□□□□□ -0.63
HMGXB4-207ENST00000498212 PDZRN3Q9UPQ7 1066 aa11.13□□□□□ -0.63
HMGXB4-207ENST00000498212 RRP7AQ9Y3A4 280 aaKnown RBP11.13□□□□□ -0.63
HMGXB4-207ENST00000498212 SLX4Q8IY92 1834 aa11.13□□□□□ -0.63
HMGXB4-207ENST00000498212 TNRC6CQ9HCJ0 1690 aaKnown RBP11.12□□□□□ -0.63
HMGXB4-207ENST00000498212 C9orf131Q5VYM1 1079 aa11.12□□□□□ -0.63
HMGXB4-207ENST00000498212 NGEFQ8N5V2 710 aa11.12□□□□□ -0.63
HMGXB4-207ENST00000498212 ZNF622Q969S3 477 aaKnown RBP eCLIP11.12□□□□□ -0.633e-6■□□□□ 8.1
HMGXB4-207ENST00000498212 NIP7Q9Y221 180 aaKnown RBP eCLIP11.12□□□□□ -0.63
HMGXB4-207ENST00000498212 MYL6BP14649 208 aa11.11□□□□□ -0.63
HMGXB4-207ENST00000498212 HLFQ16534 295 aa11.11□□□□□ -0.63
HMGXB4-207ENST00000498212 NBPF5PQ86XG9 351 aaPredicted RBP11.11□□□□□ -0.63
HMGXB4-207ENST00000498212 ERBB4Q15303 1308 aa11.1□□□□□ -0.63
HMGXB4-207ENST00000498212 MAP3K15Q6ZN16 1313 aa11.1□□□□□ -0.63
HMGXB4-207ENST00000498212 SENP3-EIF4A1A0A087X0R7 540 aa11.1□□□□□ -0.63
HMGXB4-207ENST00000498212 ERVV-1B6SEH8 477 aa11.1□□□□□ -0.63
HMGXB4-207ENST00000498212 RASSF7Q02833 373 aa11.1□□□□□ -0.63
HMGXB4-207ENST00000498212 TPTE2Q6XPS3 522 aa11.1□□□□□ -0.63
HMGXB4-207ENST00000498212 KIF6Q6ZMV9 814 aa11.1□□□□□ -0.63
HMGXB4-207ENST00000498212 RNF181Q9P0P0 153 aa11.1□□□□□ -0.63
HMGXB4-207ENST00000498212 TRIM35Q9UPQ4 493 aa11.1□□□□□ -0.63
HMGXB4-207ENST00000498212 FAM177BA6PVY3 158 aa11.09□□□□□ -0.63
HMGXB4-207ENST00000498212 SRGNP10124 158 aa11.09□□□□□ -0.63
HMGXB4-207ENST00000498212 EIF2S2P20042 333 aaKnown RBP11.09□□□□□ -0.63
HMGXB4-207ENST00000498212 MASTLQ96GX5 879 aa11.09□□□□□ -0.63
HMGXB4-207ENST00000498212 LAS1LQ9Y4W2 734 aaKnown RBP11.09□□□□□ -0.63
HMGXB4-207ENST00000498212 CHL1O00533 1208 aa11.08□□□□□ -0.64
HMGXB4-207ENST00000498212 KIF3CO14782 793 aa11.08□□□□□ -0.64
HMGXB4-207ENST00000498212 STYK1Q6J9G0 422 aa11.08□□□□□ -0.64
HMGXB4-207ENST00000498212 TTLL7Q6ZT98 887 aa11.08□□□□□ -0.64
HMGXB4-207ENST00000498212 CNKSR1Q969H4 720 aa11.08□□□□□ -0.64
HMGXB4-207ENST00000498212 ZBTB3Q9H5J0 574 aa11.08□□□□□ -0.64
HMGXB4-207ENST00000498212 LAMB2P55268 1798 aa11.08□□□□□ -0.64
HMGXB4-207ENST00000498212 C21orf2O43822 256 aa11.07□□□□□ -0.64
HMGXB4-207ENST00000498212 LMNB1P20700 586 aa11.07□□□□□ -0.64
HMGXB4-207ENST00000498212 GTF2E1P29083 439 aaPredicted RBP11.07□□□□□ -0.64
HMGXB4-207ENST00000498212 POLA2Q14181 598 aa11.07□□□□□ -0.64
HMGXB4-207ENST00000498212 PDIA6Q15084 440 aa11.07□□□□□ -0.64
HMGXB4-207ENST00000498212 GIGYF2Q6Y7W6 1299 aaKnown RBP11.07□□□□□ -0.64
HMGXB4-207ENST00000498212 NYXQ9GZU5 481 aa11.07□□□□□ -0.64
HMGXB4-207ENST00000498212 ZC3H4Q9UPT8 1303 aaKnown RBP11.07□□□□□ -0.64
HMGXB4-207ENST00000498212 ZNF316A6NFI3 1004 aaPredicted RBP11.06□□□□□ -0.64
HMGXB4-207ENST00000498212 NFKBIEO00221 500 aa11.06□□□□□ -0.64
HMGXB4-207ENST00000498212 MYCNP04198 464 aaPredicted RBP11.06□□□□□ -0.64
HMGXB4-207ENST00000498212 NPR1P16066 1061 aa11.06□□□□□ -0.64
HMGXB4-207ENST00000498212 PRPF40BQ6NWY9 871 aaKnown RBP11.06□□□□□ -0.64
HMGXB4-207ENST00000498212 LRP10Q7Z4F1 713 aa11.06□□□□□ -0.64
HMGXB4-207ENST00000498212 NECTIN2Q92692 538 aa11.06□□□□□ -0.64
HMGXB4-207ENST00000498212 NMRK2Q9NPI5 230 aa11.06□□□□□ -0.64
HMGXB4-207ENST00000498212 UBN2Q6ZU65 1347 aa11.06□□□□□ -0.64
HMGXB4-207ENST00000498212 KDM2BQ8NHM5 1336 aa11.06□□□□□ -0.64
HMGXB4-207ENST00000498212 IBTKQ9P2D0 1353 aaPredicted RBP11.05□□□□□ -0.64
HMGXB4-207ENST00000498212 KLRG2A4D1S0 409 aaPredicted RBP11.05□□□□□ -0.64
HMGXB4-207ENST00000498212 APAF1O14727 1248 aa11.05□□□□□ -0.64
HMGXB4-207ENST00000498212 ANXA1P04083 346 aa11.05□□□□□ -0.64
HMGXB4-207ENST00000498212 GPTP24298 496 aa11.05□□□□□ -0.64
HMGXB4-207ENST00000498212 PRELPP51888 382 aa11.05□□□□□ -0.64
HMGXB4-207ENST00000498212 KRT24Q2M2I5 525 aa11.05□□□□□ -0.64
HMGXB4-207ENST00000498212 PROSER3Q2NL68 480 aa11.05□□□□□ -0.64
HMGXB4-207ENST00000498212 RIC1Q4ADV7 1423 aa11.05□□□□□ -0.64
HMGXB4-207ENST00000498212 SOGA3Q5TF21 947 aa11.05□□□□□ -0.64
HMGXB4-207ENST00000498212 NUTM1Q86Y26 1132 aa11.05□□□□□ -0.64
HMGXB4-207ENST00000498212 CFAP44Q96MT7 982 aa11.05□□□□□ -0.64
HMGXB4-207ENST00000498212 ABCC12Q96J65 1359 aa11.04□□□□□ -0.64
HMGXB4-207ENST00000498212 HOXB7P09629 217 aa11.04□□□□□ -0.64
HMGXB4-207ENST00000498212 PPP1R42Q7Z4L9 355 aa11.04□□□□□ -0.64
HMGXB4-207ENST00000498212 ZNF34Q8IZ26 560 aa11.04□□□□□ -0.64
HMGXB4-207ENST00000498212 DDX21Q9NR30 783 aaKnown RBP eCLIP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms