RNA–Protein interactions for RNA: ENST00000498034.5

LMBR1-219, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-219ENST00000498034 ZNF219Q9P2Y4 722 aaPredicted RBP26.82■■□□□ 1.88
LMBR1-219ENST00000498034 HSPA6P17066 643 aa26.81■■□□□ 1.88
LMBR1-219ENST00000498034 NBPF5PQ86XG9 351 aaPredicted RBP26.81■■□□□ 1.88
LMBR1-219ENST00000498034 NGEFQ8N5V2 710 aa26.81■■□□□ 1.88
LMBR1-219ENST00000498034 HLFQ16534 295 aa26.8■■□□□ 1.88
LMBR1-219ENST00000498034 NIP7Q9Y221 180 aaKnown RBP eCLIP26.8■■□□□ 1.88
LMBR1-219ENST00000498034 NFKBIEO00221 500 aa26.79■■□□□ 1.88
LMBR1-219ENST00000498034 C21orf2O43822 256 aa26.79■■□□□ 1.88
LMBR1-219ENST00000498034 LMNB1P20700 586 aa26.79■■□□□ 1.88
LMBR1-219ENST00000498034 RRP7AQ9Y3A4 280 aaKnown RBP26.79■■□□□ 1.88
LMBR1-219ENST00000498034 FAM177BA6PVY3 158 aa26.78■■□□□ 1.88
LMBR1-219ENST00000498034 TOMM70O94826 608 aa26.78■■□□□ 1.88
LMBR1-219ENST00000498034 TMPOP42166 694 aaKnown RBP26.78■■□□□ 1.88
LMBR1-219ENST00000498034 CCDC88AQ3V6T2 1871 aa26.77■■□□□ 1.88
LMBR1-219ENST00000498034 KDM2BQ8NHM5 1336 aa26.77■■□□□ 1.88
LMBR1-219ENST00000498034 RGL2O15211 777 aa26.77■■□□□ 1.88
LMBR1-219ENST00000498034 SRGNP10124 158 aa26.77■■□□□ 1.88
LMBR1-219ENST00000498034 CCDC146Q8IYE0 955 aa26.77■■□□□ 1.88
LMBR1-219ENST00000498034 TSPYL4Q9UJ04 414 aa26.77■■□□□ 1.88
LMBR1-219ENST00000498034 STYK1Q6J9G0 422 aa26.76■■□□□ 1.87
LMBR1-219ENST00000498034 CACNA1SQ13698 1873 aa26.76■■□□□ 1.87
LMBR1-219ENST00000498034 MYL6BP14649 208 aa26.75■■□□□ 1.87
LMBR1-219ENST00000498034 TPTE2Q6XPS3 522 aa26.75■■□□□ 1.87
LMBR1-219ENST00000498034 CNKSR1Q969H4 720 aa26.75■■□□□ 1.87
LMBR1-219ENST00000498034 MASTLQ96GX5 879 aa26.75■■□□□ 1.87
LMBR1-219ENST00000498034 RRAGCQ9HB90 399 aa26.75■■□□□ 1.87
LMBR1-219ENST00000498034 SLX4Q8IY92 1834 aa26.74■■□□□ 1.87
LMBR1-219ENST00000498034 TTLL7Q6ZT98 887 aa26.74■■□□□ 1.87
LMBR1-219ENST00000498034 NEUROD2Q15784 382 aa26.73■■□□□ 1.87
LMBR1-219ENST00000498034 PRPF40BQ6NWY9 871 aaKnown RBP26.73■■□□□ 1.87
LMBR1-219ENST00000498034 MAP3K15Q6ZN16 1313 aa26.72■■□□□ 1.87
LMBR1-219ENST00000498034 ZC3H4Q9UPT8 1303 aaKnown RBP26.72■■□□□ 1.87
LMBR1-219ENST00000498034 ERVV-1B6SEH8 477 aa26.72■■□□□ 1.87
LMBR1-219ENST00000498034 C16orf71Q8IYS4 520 aaPredicted RBP26.72■■□□□ 1.87
LMBR1-219ENST00000498034 FER1L6Q2WGJ9 1857 aa26.72■■□□□ 1.87
LMBR1-219ENST00000498034 LMOD3Q0VAK6 560 aa26.71■■□□□ 1.87
LMBR1-219ENST00000498034 NUP98P52948 1817 aa26.71■■□□□ 1.87
LMBR1-219ENST00000498034 TIAM2Q8IVF5 1701 aa26.7■■□□□ 1.87
LMBR1-219ENST00000498034 WDR43Q15061 677 aaKnown RBP eCLIP26.7■■□□□ 1.86
LMBR1-219ENST00000498034 KIF6Q6ZMV9 814 aa26.7■■□□□ 1.86
LMBR1-219ENST00000498034 ARFGEF2Q9Y6D5 1785 aa26.7■■□□□ 1.86
LMBR1-219ENST00000498034 TNRC6CQ9HCJ0 1690 aaKnown RBP26.7■■□□□ 1.86
LMBR1-219ENST00000498034 KLRG2A4D1S0 409 aaPredicted RBP26.69■■□□□ 1.86
LMBR1-219ENST00000498034 GLTPD2A6NH11 291 aa26.69■■□□□ 1.86
LMBR1-219ENST00000498034 EIF2S2P20042 333 aaKnown RBP26.69■■□□□ 1.86
LMBR1-219ENST00000498034 GTF2E1P29083 439 aaPredicted RBP26.69■■□□□ 1.86
LMBR1-219ENST00000498034 RBM46Q8TBY0 533 aaKnown RBP26.69■■□□□ 1.86
LMBR1-219ENST00000498034 RUNDC1Q96C34 613 aa26.69■■□□□ 1.86
LMBR1-219ENST00000498034 ZBTB3Q9H5J0 574 aa26.69■■□□□ 1.86
LMBR1-219ENST00000498034 NPR1P16066 1061 aa26.68■■□□□ 1.86
LMBR1-219ENST00000498034 PRKRIP1Q9H875 184 aaPredicted RBP26.68■■□□□ 1.86
LMBR1-219ENST00000498034 BABAM1Q9NWV8 329 aa26.68■■□□□ 1.86
LMBR1-219ENST00000498034 ADAMTS8Q9UP79 889 aa26.68■■□□□ 1.86
LMBR1-219ENST00000498034 ERBB4Q15303 1308 aa26.67■■□□□ 1.86
LMBR1-219ENST00000498034 GPTP24298 496 aa26.66■■□□□ 1.86
LMBR1-219ENST00000498034 PDIA6Q15084 440 aa26.66■■□□□ 1.86
LMBR1-219ENST00000498034 NUTM1Q86Y26 1132 aa26.66■■□□□ 1.86
LMBR1-219ENST00000498034 TAOK3Q9H2K8 898 aa26.66■■□□□ 1.86
LMBR1-219ENST00000498034 TRIM35Q9UPQ4 493 aa26.66■■□□□ 1.86
LMBR1-219ENST00000498034 LTBP3Q9NS15 1303 aa26.65■■□□□ 1.86
LMBR1-219ENST00000498034 ERFEQ4G0M1 354 aa26.65■■□□□ 1.86
LMBR1-219ENST00000498034 C7orf43Q8WVR3 580 aa26.65■■□□□ 1.86
LMBR1-219ENST00000498034 NYXQ9GZU5 481 aa26.65■■□□□ 1.86
LMBR1-219ENST00000498034 DICER1Q9UPY3 1922 aaKnown RBP26.65■■□□□ 1.86
LMBR1-219ENST00000498034 UBN2Q6ZU65 1347 aa26.65■■□□□ 1.86
LMBR1-219ENST00000498034 ABCC12Q96J65 1359 aa26.64■■□□□ 1.86
LMBR1-219ENST00000498034 ANXA1P04083 346 aa26.64■■□□□ 1.86
LMBR1-219ENST00000498034 SOGA3Q5TF21 947 aa26.64■■□□□ 1.86
LMBR1-219ENST00000498034 LRP10Q7Z4F1 713 aa26.64■■□□□ 1.86
LMBR1-219ENST00000498034 APLP1P51693 650 aa26.63■■□□□ 1.85
LMBR1-219ENST00000498034 PROSER3Q2NL68 480 aa26.63■■□□□ 1.85
LMBR1-219ENST00000498034 GIGYF2Q6Y7W6 1299 aaKnown RBP26.63■■□□□ 1.85
LMBR1-219ENST00000498034 NECTIN2Q92692 538 aa26.63■■□□□ 1.85
LMBR1-219ENST00000498034 LAS1LQ9Y4W2 734 aaKnown RBP26.63■■□□□ 1.85
LMBR1-219ENST00000498034 SUSD4Q5VX71 490 aa26.62■■□□□ 1.85
LMBR1-219ENST00000498034 ZNF34Q8IZ26 560 aa26.62■■□□□ 1.85
LMBR1-219ENST00000498034 CHL1O00533 1208 aa26.61■■□□□ 1.85
LMBR1-219ENST00000498034 VEGFAP15692 232 aaPredicted RBP26.61■■□□□ 1.85
LMBR1-219ENST00000498034 FSTL1Q12841 308 aa26.61■■□□□ 1.85
LMBR1-219ENST00000498034 KRT24Q2M2I5 525 aa26.61■■□□□ 1.85
LMBR1-219ENST00000498034 CCDC93Q567U6 631 aa26.61■■□□□ 1.85
LMBR1-219ENST00000498034 DPY19L2Q6NUT2 758 aa26.61■■□□□ 1.85
LMBR1-219ENST00000498034 OLFM4Q6UX06 510 aa26.61■■□□□ 1.85
LMBR1-219ENST00000498034 CEP350Q5VT06 3117 aa26.61■■□□□ 1.85
LMBR1-219ENST00000498034 ALDH1B1P30837 517 aa26.59■■□□□ 1.85
LMBR1-219ENST00000498034 POTECB2RU33 542 aa26.58■■□□□ 1.85
LMBR1-219ENST00000498034 CRY2Q49AN0 593 aa26.58■■□□□ 1.85
LMBR1-219ENST00000498034 IBTKQ9P2D0 1353 aaPredicted RBP26.58■■□□□ 1.84
LMBR1-219ENST00000498034 NTSR2O95665 410 aa26.57■■□□□ 1.84
LMBR1-219ENST00000498034 WDR90Q96KV7 1748 aa26.56■■□□□ 1.84
LMBR1-219ENST00000498034 FKBP4Q02790 459 aaKnown RBP eCLIP26.56■■□□□ 1.84
LMBR1-219ENST00000498034 AIMP1Q12904 312 aaKnown RBP26.56■■□□□ 1.84
LMBR1-219ENST00000498034 COPS6Q7L5N1 327 aa26.56■■□□□ 1.84
LMBR1-219ENST00000498034 SMC1BQ8NDV3 1235 aa26.56■■□□□ 1.84
LMBR1-219ENST00000498034 PPP1R42Q7Z4L9 355 aa26.55■■□□□ 1.84
LMBR1-219ENST00000498034 XAGE3Q8WTP9 111 aa26.55■■□□□ 1.84
LMBR1-219ENST00000498034 DDNO94850 711 aaPredicted RBP26.54■■□□□ 1.84
LMBR1-219ENST00000498034 HTRA3P83110 453 aa26.54■■□□□ 1.84
LMBR1-219ENST00000498034 PARP10Q53GL7 1025 aa26.54■■□□□ 1.84
LMBR1-219ENST00000498034 RTKN2Q8IZC4 609 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms