RNA–Protein interactions for RNA: ENST00000497511.5

SKAP2-209, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 4

Gene SKAP2, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-209ENST00000497511 PCDH11YQ9BZA8 1340 aa15.17■□□□□ 0.02
SKAP2-209ENST00000497511 NBPF3Q9H094 633 aa15.17■□□□□ 0.02
SKAP2-209ENST00000497511 LY75O60449 1722 aa15.17■□□□□ 0.02
SKAP2-209ENST00000497511 IGSF1Q8N6C5 1336 aa15.17■□□□□ 0.02
SKAP2-209ENST00000497511 RTL1A6NKG5 1358 aa15.16■□□□□ 0.02
SKAP2-209ENST00000497511 SMARCC1Q92922 1105 aaPredicted RBP15.16■□□□□ 0.02
SKAP2-209ENST00000497511 RABGEF1Q9UJ41 708 aa15.16■□□□□ 0.02
SKAP2-209ENST00000497511 TRIM6-TRIM34B2RNG4 842 aa15.14■□□□□ 0.01
SKAP2-209ENST00000497511 GGNBP2Q9H3C7 697 aa15.14■□□□□ 0.01
SKAP2-209ENST00000497511 ADCY9O60503 1353 aa15.13■□□□□ 0.01
SKAP2-209ENST00000497511 TONSLQ96HA7 1378 aa15.13■□□□□ 0.01
SKAP2-209ENST00000497511 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.13■□□□□ 0.01
SKAP2-209ENST00000497511 BHMG1C9JSJ3 638 aaPredicted RBP15.13■□□□□ 0.01
SKAP2-209ENST00000497511 PRSS12P56730 875 aa15.13■□□□□ 0.01
SKAP2-209ENST00000497511 PROX2Q3B8N5 592 aa15.13■□□□□ 0.01
SKAP2-209ENST00000497511 NSD3Q9BZ95 1437 aa15.13■□□□□ 0.01
SKAP2-209ENST00000497511 RBM27Q9P2N5 1060 aaKnown RBP15.13■□□□□ 0.01
SKAP2-209ENST00000497511 CDHR5Q9HBB8 845 aa15.12■□□□□ 0.01
SKAP2-209ENST00000497511 ST20-MTHFSA0A0A6YYL1 179 aa15.11■□□□□ 0.01
SKAP2-209ENST00000497511 SMIM5Q71RC9 77 aa15.11■□□□□ 0.01
SKAP2-209ENST00000497511 PACS2Q86VP3 889 aa15.11■□□□□ 0.01
SKAP2-209ENST00000497511 CDCA7LQ96GN5 454 aa15.11■□□□□ 0.01
SKAP2-209ENST00000497511 C5P01031 1676 aa15.11■□□□□ 0.01
SKAP2-209ENST00000497511 SSFA2P28290 1259 aa15.1■□□□□ 0.01
SKAP2-209ENST00000497511 HSP90AB2PQ58FF8 381 aa15.1■□□□□ 0.01
SKAP2-209ENST00000497511 MRPL50Q8N5N7 158 aaKnown RBP15.1■□□□□ 0.01
SKAP2-209ENST00000497511 RNF166Q96A37 237 aaPredicted RBP15.1■□□□□ 0.01
SKAP2-209ENST00000497511 FYB1O15117 783 aa15.09■□□□□ 0.01
SKAP2-209ENST00000497511 CYP27B1O15528 508 aa15.09■□□□□ 0.01
SKAP2-209ENST00000497511 KIAA1468Q9P260 1216 aa15.09■□□□□ 0.01
SKAP2-209ENST00000497511 INSRP06213 1382 aa15.09■□□□□ 0.01
SKAP2-209ENST00000497511 RGPD2P0DJD1 1756 aa15.08■□□□□ 0.01
SKAP2-209ENST00000497511 GNPATO15228 680 aa15.08■□□□□ 0
SKAP2-209ENST00000497511 APLP1P51693 650 aa15.08■□□□□ 0
SKAP2-209ENST00000497511 PIGBQ92521 554 aa15.08■□□□□ 0
SKAP2-209ENST00000497511 TESK2Q96S53 571 aa15.08■□□□□ 0
SKAP2-209ENST00000497511 NPDC1Q9NQX5 325 aaPredicted RBP15.08■□□□□ 0
SKAP2-209ENST00000497511 FLT4P35916 1363 aa15.08■□□□□ 0
SKAP2-209ENST00000497511 LOC102724428A0A0B4J2F2 783 aa15.07■□□□□ 0
SKAP2-209ENST00000497511 PPM1GO15355 546 aaPredicted RBP15.07■□□□□ 0
SKAP2-209ENST00000497511 SIK1P57059 783 aa15.07■□□□□ 0
SKAP2-209ENST00000497511 LAPTM4BQ86VI4 370 aa15.07■□□□□ 0
SKAP2-209ENST00000497511 AMIGO3Q86WK7 504 aa15.07■□□□□ 0
SKAP2-209ENST00000497511 TMOD3Q9NYL9 352 aa15.07■□□□□ 0
SKAP2-209ENST00000497511 SPG7Q9UQ90 795 aa15.07■□□□□ 0
SKAP2-209ENST00000497511 BCS1LQ9Y276 419 aa15.07■□□□□ 0
SKAP2-209ENST00000497511 C4BP0C0L5 1744 aa15.06■□□□□ 0
SKAP2-209ENST00000497511 GOLGA8CPA6NN73 597 aa15.06■□□□□ 0
SKAP2-209ENST00000497511 FCHSD2O94868 740 aa15.06■□□□□ 0
SKAP2-209ENST00000497511 MMP10P09238 476 aa15.06■□□□□ 0
SKAP2-209ENST00000497511 ATP6V1AP38606 617 aa15.06■□□□□ 0
SKAP2-209ENST00000497511 TMF1P82094 1093 aa15.06■□□□□ 0
SKAP2-209ENST00000497511 PTGDRQ13258 359 aa15.06■□□□□ 0
SKAP2-209ENST00000497511 RBM26Q5T8P6 1007 aaKnown RBP15.06■□□□□ 0
SKAP2-209ENST00000497511 LINC00116Q8NCU8 138 aa15.06■□□□□ 0
SKAP2-209ENST00000497511 TOMM70O94826 608 aa15.04■□□□□ -0
SKAP2-209ENST00000497511 ARHGAP27Q6ZUM4 889 aa15.04■□□□□ -0
SKAP2-209ENST00000497511 C16orf71Q8IYS4 520 aaPredicted RBP15.04■□□□□ -0
SKAP2-209ENST00000497511 TSKSQ9UJT2 592 aa15.04■□□□□ -0
SKAP2-209ENST00000497511 KIF24Q5T7B8 1368 aa15.03■□□□□ -0
SKAP2-209ENST00000497511 A0A0G2JLW4 131 aa15.02■□□□□ -0
SKAP2-209ENST00000497511 TGFB2P61812 414 aa15.02■□□□□ -0
SKAP2-209ENST00000497511 TRAPPC3LQ5T215 181 aa15.02■□□□□ -0
SKAP2-209ENST00000497511 ASAP1Q9ULH1 1129 aa15.02■□□□□ -0
SKAP2-209ENST00000497511 RTCBQ9Y3I0 505 aaKnown RBP15.02■□□□□ -0
SKAP2-209ENST00000497511 EMILIN1Q9Y6C2 1016 aa15.02■□□□□ -0
SKAP2-209ENST00000497511 TAF1LQ8IZX4 1826 aa15.01□□□□□ -0.01
SKAP2-209ENST00000497511 NBPF26B4DH59 902 aa15.01□□□□□ -0.01
SKAP2-209ENST00000497511 ITPK1Q13572 414 aa15.01□□□□□ -0.01
SKAP2-209ENST00000497511 CDCA8Q53HL2 280 aa15.01□□□□□ -0.01
SKAP2-209ENST00000497511 NLGN1Q8N2Q7 840 aa15.01□□□□□ -0.01
SKAP2-209ENST00000497511 CCDC87Q9NVE4 849 aa15.01□□□□□ -0.01
SKAP2-209ENST00000497511 IFNL2Q8IZJ0 200 aa15□□□□□ -0.01
SKAP2-209ENST00000497511 TTC13Q8NBP0 860 aa15□□□□□ -0.01
SKAP2-209ENST00000497511 NMRK2Q9NPI5 230 aa15□□□□□ -0.01
SKAP2-209ENST00000497511 HIC1Q14526 733 aa14.99□□□□□ -0.01
SKAP2-209ENST00000497511 PADI6Q6TGC4 694 aa14.99□□□□□ -0.01
SKAP2-209ENST00000497511 PARP3Q9Y6F1 533 aa14.99□□□□□ -0.01
SKAP2-209ENST00000497511 PXDNLA1KZ92 1463 aa14.99□□□□□ -0.01
SKAP2-209ENST00000497511 TOGARAM1Q9Y4F4 1720 aa14.98□□□□□ -0.01
SKAP2-209ENST00000497511 UBR3Q6ZT12 1888 aa14.98□□□□□ -0.01
SKAP2-209ENST00000497511 RFC4P35249 363 aa14.98□□□□□ -0.01
SKAP2-209ENST00000497511 GPIHBP1Q8IV16 184 aa14.98□□□□□ -0.01
SKAP2-209ENST00000497511 PHKG2P15735 406 aa14.97□□□□□ -0.01
SKAP2-209ENST00000497511 DPEP1P16444 411 aa14.97□□□□□ -0.01
SKAP2-209ENST00000497511 ATG3Q9NT62 314 aa14.97□□□□□ -0.01
SKAP2-209ENST00000497511 CICQ96RK0 1608 aaPredicted RBP14.96□□□□□ -0.01
SKAP2-209ENST00000497511 C9orf131Q5VYM1 1079 aa14.96□□□□□ -0.01
SKAP2-209ENST00000497511 RBM46Q8TBY0 533 aaKnown RBP14.96□□□□□ -0.01
SKAP2-209ENST00000497511 TATDN2Q93075 761 aa14.96□□□□□ -0.01
SKAP2-209ENST00000497511 EYA1Q99502 592 aa14.96□□□□□ -0.01
SKAP2-209ENST00000497511 FAM198AQ9UFP1 575 aa14.96□□□□□ -0.01
SKAP2-209ENST00000497511 ITGB4P16144 1822 aa14.96□□□□□ -0.01
SKAP2-209ENST00000497511 DNAJC5GQ8N7S2 189 aa14.95□□□□□ -0.02
SKAP2-209ENST00000497511 WNT2BQ93097 391 aa14.95□□□□□ -0.02
SKAP2-209ENST00000497511 KCTD12Q96CX2 325 aaKnown RBP14.95□□□□□ -0.02
SKAP2-209ENST00000497511 PNMA3Q9UL41 463 aa14.95□□□□□ -0.02
SKAP2-209ENST00000497511 WASHC2AQ641Q2 1341 aa14.94□□□□□ -0.02
SKAP2-209ENST00000497511 KDM2BQ8NHM5 1336 aa14.94□□□□□ -0.02
SKAP2-209ENST00000497511 C10orf71Q711Q0 1435 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms