RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 PRELPP51888 382 aa22.67■■□□□ 1.22
SMC4-226ENST00000497311 NBPF5PQ86XG9 351 aaPredicted RBP22.67■■□□□ 1.22
SMC4-226ENST00000497311 ZNF219Q9P2Y4 722 aaPredicted RBP22.67■■□□□ 1.22
SMC4-226ENST00000497311 RGL2O15211 777 aa22.66■■□□□ 1.22
SMC4-226ENST00000497311 C21orf2O43822 256 aa22.66■■□□□ 1.22
SMC4-226ENST00000497311 APLP1P51693 650 aa22.66■■□□□ 1.22
SMC4-226ENST00000497311 RALBP1Q15311 655 aa22.66■■□□□ 1.22
SMC4-226ENST00000497311 CNKSR1Q969H4 720 aa22.66■■□□□ 1.22
SMC4-226ENST00000497311 SRGNP10124 158 aa22.65■■□□□ 1.22
SMC4-226ENST00000497311 STYK1Q6J9G0 422 aa22.65■■□□□ 1.22
SMC4-226ENST00000497311 NIP7Q9Y221 180 aaKnown RBP eCLIP22.65■■□□□ 1.22
SMC4-226ENST00000497311 COL11A2P13942 1736 aaPredicted RBP22.65■■□□□ 1.22
SMC4-226ENST00000497311 CCDC88AQ3V6T2 1871 aa22.64■■□□□ 1.22
SMC4-226ENST00000497311 MASTLQ96GX5 879 aa22.64■■□□□ 1.21
SMC4-226ENST00000497311 THUMPD2Q9BTF0 503 aaKnown RBP22.64■■□□□ 1.21
SMC4-226ENST00000497311 TNRC6CQ9HCJ0 1690 aaKnown RBP22.63■■□□□ 1.21
SMC4-226ENST00000497311 GLTPD2A6NH11 291 aa22.63■■□□□ 1.21
SMC4-226ENST00000497311 EIF4A1P60842 406 aaKnown RBP22.63■■□□□ 1.21
SMC4-226ENST00000497311 TPTE2Q6XPS3 522 aa22.63■■□□□ 1.21
SMC4-226ENST00000497311 LAMB4A4D0S4 1761 aa22.63■■□□□ 1.21
SMC4-226ENST00000497311 KDM3BQ7LBC6 1761 aa22.63■■□□□ 1.21
SMC4-226ENST00000497311 FSTL1Q12841 308 aa22.62■■□□□ 1.21
SMC4-226ENST00000497311 HLFQ16534 295 aa22.61■■□□□ 1.21
SMC4-226ENST00000497311 PRPF40BQ6NWY9 871 aaKnown RBP22.61■■□□□ 1.21
SMC4-226ENST00000497311 NGEFQ8N5V2 710 aa22.61■■□□□ 1.21
SMC4-226ENST00000497311 DDX10Q13206 875 aaKnown RBP22.6■■□□□ 1.21
SMC4-226ENST00000497311 SOGA3Q5TF21 947 aa22.6■■□□□ 1.21
SMC4-226ENST00000497311 RRP7AQ9Y3A4 280 aaKnown RBP22.6■■□□□ 1.21
SMC4-226ENST00000497311 FER1L6Q2WGJ9 1857 aa22.6■■□□□ 1.21
SMC4-226ENST00000497311 SLX4Q8IY92 1834 aa22.59■■□□□ 1.21
SMC4-226ENST00000497311 FAM177BA6PVY3 158 aa22.59■■□□□ 1.21
SMC4-226ENST00000497311 NPR1P16066 1061 aa22.59■■□□□ 1.21
SMC4-226ENST00000497311 DPY19L2Q6NUT2 758 aa22.59■■□□□ 1.21
SMC4-226ENST00000497311 TAOK3Q9H2K8 898 aa22.59■■□□□ 1.21
SMC4-226ENST00000497311 TIAM2Q8IVF5 1701 aa22.59■■□□□ 1.21
SMC4-226ENST00000497311 LTBP3Q9NS15 1303 aa22.58■■□□□ 1.21
SMC4-226ENST00000497311 KLRG2A4D1S0 409 aaPredicted RBP22.58■■□□□ 1.21
SMC4-226ENST00000497311 ERVV-1B6SEH8 477 aa22.58■■□□□ 1.21
SMC4-226ENST00000497311 VEGFAP15692 232 aaPredicted RBP22.58■■□□□ 1.21
SMC4-226ENST00000497311 GTF2E1P29083 439 aaPredicted RBP22.58■■□□□ 1.21
SMC4-226ENST00000497311 RIPK4P57078 832 aa22.58■■□□□ 1.21
SMC4-226ENST00000497311 ERFEQ4G0M1 354 aa22.58■■□□□ 1.21
SMC4-226ENST00000497311 CACNA1SQ13698 1873 aa22.58■■□□□ 1.2
SMC4-226ENST00000497311 MYL6BP14649 208 aa22.57■■□□□ 1.2
SMC4-226ENST00000497311 TSPYL4Q9UJ04 414 aa22.57■■□□□ 1.2
SMC4-226ENST00000497311 MAP3K15Q6ZN16 1313 aa22.57■■□□□ 1.2
SMC4-226ENST00000497311 KIF6Q6ZMV9 814 aa22.56■■□□□ 1.2
SMC4-226ENST00000497311 SMC1BQ8NDV3 1235 aa22.56■■□□□ 1.2
SMC4-226ENST00000497311 MYBBP1AQ9BQG0 1328 aaKnown RBP22.56■■□□□ 1.2
SMC4-226ENST00000497311 ARFGEF2Q9Y6D5 1785 aa22.55■■□□□ 1.2
SMC4-226ENST00000497311 DICER1Q9UPY3 1922 aaKnown RBP22.55■■□□□ 1.2
SMC4-226ENST00000497311 TTLL7Q6ZT98 887 aa22.55■■□□□ 1.2
SMC4-226ENST00000497311 NYXQ9GZU5 481 aa22.55■■□□□ 1.2
SMC4-226ENST00000497311 TMPOP42166 694 aaKnown RBP22.54■■□□□ 1.2
SMC4-226ENST00000497311 LMOD3Q0VAK6 560 aa22.54■■□□□ 1.2
SMC4-226ENST00000497311 DNAJC5GQ8N7S2 189 aa22.54■■□□□ 1.2
SMC4-226ENST00000497311 C7orf43Q8WVR3 580 aa22.54■■□□□ 1.2
SMC4-226ENST00000497311 CCDC93Q567U6 631 aa22.53■■□□□ 1.2
SMC4-226ENST00000497311 BABAM1Q9NWV8 329 aa22.53■■□□□ 1.2
SMC4-226ENST00000497311 ERBB4Q15303 1308 aa22.53■■□□□ 1.2
SMC4-226ENST00000497311 NUP98P52948 1817 aa22.52■■□□□ 1.2
SMC4-226ENST00000497311 ALDH1B1P30837 517 aa22.52■■□□□ 1.2
SMC4-226ENST00000497311 ZBTB3Q9H5J0 574 aa22.52■■□□□ 1.2
SMC4-226ENST00000497311 WDR90Q96KV7 1748 aa22.51■■□□□ 1.19
SMC4-226ENST00000497311 POTECB2RU33 542 aa22.5■■□□□ 1.19
SMC4-226ENST00000497311 EIF2S2P20042 333 aaKnown RBP22.5■■□□□ 1.19
SMC4-226ENST00000497311 GPTP24298 496 aa22.5■■□□□ 1.19
SMC4-226ENST00000497311 NUTM1Q86Y26 1132 aa22.5■■□□□ 1.19
SMC4-226ENST00000497311 HTRA3P83110 453 aa22.49■■□□□ 1.19
SMC4-226ENST00000497311 GIGYF2Q6Y7W6 1299 aaKnown RBP22.49■■□□□ 1.19
SMC4-226ENST00000497311 CCDC146Q8IYE0 955 aa22.49■■□□□ 1.19
SMC4-226ENST00000497311 FKBP4Q02790 459 aaKnown RBP eCLIP22.48■■□□□ 1.19
SMC4-226ENST00000497311 WDR43Q15061 677 aaKnown RBP eCLIP22.48■■□□□ 1.19
SMC4-226ENST00000497311 NEUROD2Q15784 382 aa22.48■■□□□ 1.19
SMC4-226ENST00000497311 CRY2Q49AN0 593 aa22.48■■□□□ 1.19
SMC4-226ENST00000497311 RTKN2Q8IZC4 609 aa22.48■■□□□ 1.19
SMC4-226ENST00000497311 UBN2Q6ZU65 1347 aa22.48■■□□□ 1.19
SMC4-226ENST00000497311 ABCC12Q96J65 1359 aa22.48■■□□□ 1.19
SMC4-226ENST00000497311 DDNO94850 711 aaPredicted RBP22.47■■□□□ 1.19
SMC4-226ENST00000497311 ZNF34Q8IZ26 560 aa22.47■■□□□ 1.19
SMC4-226ENST00000497311 IBTKQ9P2D0 1353 aaPredicted RBP22.47■■□□□ 1.19
SMC4-226ENST00000497311 PDIA6Q15084 440 aa22.46■■□□□ 1.19
SMC4-226ENST00000497311 SUSD4Q5VX71 490 aa22.46■■□□□ 1.19
SMC4-226ENST00000497311 OLFM4Q6UX06 510 aa22.46■■□□□ 1.19
SMC4-226ENST00000497311 RUNDC1Q96C34 613 aa22.46■■□□□ 1.19
SMC4-226ENST00000497311 KLRG1Q96E93 195 aa22.46■■□□□ 1.19
SMC4-226ENST00000497311 LRP10Q7Z4F1 713 aa22.45■■□□□ 1.18
SMC4-226ENST00000497311 PPP1R42Q7Z4L9 355 aa22.45■■□□□ 1.18
SMC4-226ENST00000497311 RPGRQ92834 1020 aaKnown RBP22.45■■□□□ 1.18
SMC4-226ENST00000497311 ZNF277Q9NRM2 450 aaPredicted RBP22.45■■□□□ 1.18
SMC4-226ENST00000497311 RIC1Q4ADV7 1423 aa22.44■■□□□ 1.18
SMC4-226ENST00000497311 PARP10Q53GL7 1025 aa22.44■■□□□ 1.18
SMC4-226ENST00000497311 NTSR2O95665 410 aa22.43■■□□□ 1.18
SMC4-226ENST00000497311 ANXA1P04083 346 aa22.43■■□□□ 1.18
SMC4-226ENST00000497311 PROSER3Q2NL68 480 aa22.43■■□□□ 1.18
SMC4-226ENST00000497311 CHL1O00533 1208 aa22.42■■□□□ 1.18
SMC4-226ENST00000497311 HOXA10P31260 410 aaPredicted RBP22.42■■□□□ 1.18
SMC4-226ENST00000497311 CC2D2BQ6DHV5 1058 aa22.42■■□□□ 1.18
SMC4-226ENST00000497311 SYNE4Q8N205 404 aa22.42■■□□□ 1.18
SMC4-226ENST00000497311 NECTIN2Q92692 538 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms