RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 H2AFB1P0C5Y9 115 aa7.37□□□□□ -1.23
VPS26A-208ENST00000497022 H2AFB2P0C5Z0 115 aa7.37□□□□□ -1.23
VPS26A-208ENST00000497022 TRIM28Q13263 835 aaKnown RBP7.37□□□□□ -1.23
VPS26A-208ENST00000497022 COL9A3Q14050 684 aaPredicted RBP7.37□□□□□ -1.23
VPS26A-208ENST00000497022 WASHC4Q2M389 1173 aa7.37□□□□□ -1.23
VPS26A-208ENST00000497022 ZNF417Q8TAU3 575 aa7.37□□□□□ -1.23
VPS26A-208ENST00000497022 ZNF587Q96SQ5 575 aaPredicted RBP7.37□□□□□ -1.23
VPS26A-208ENST00000497022 SERTAD1Q9UHV2 236 aa7.37□□□□□ -1.23
VPS26A-208ENST00000497022 FLIIQ13045 1269 aa7.36□□□□□ -1.23
VPS26A-208ENST00000497022 PLPP7Q8NBV4 271 aa7.36□□□□□ -1.23
VPS26A-208ENST00000497022 USP3Q9Y6I4 520 aa7.36□□□□□ -1.23
VPS26A-208ENST00000497022 LRP8Q14114 963 aa7.35□□□□□ -1.23
VPS26A-208ENST00000497022 C9orf172C9J069 976 aa7.34□□□□□ -1.23
VPS26A-208ENST00000497022 BACH1O14867 736 aa7.34□□□□□ -1.23
VPS26A-208ENST00000497022 ALBP02768 609 aa7.34□□□□□ -1.23
VPS26A-208ENST00000497022 NID1P14543 1247 aa7.34□□□□□ -1.23
VPS26A-208ENST00000497022 NEUROD1Q13562 356 aa7.34□□□□□ -1.23
VPS26A-208ENST00000497022 MICALL1Q8N3F8 863 aa7.34□□□□□ -1.23
VPS26A-208ENST00000497022 POM121Q96HA1 1249 aa7.34□□□□□ -1.23
VPS26A-208ENST00000497022 STARD13Q9Y3M8 1113 aa7.34□□□□□ -1.23
VPS26A-208ENST00000497022 FAM229AH3BQW9 127 aa7.33□□□□□ -1.24
VPS26A-208ENST00000497022 TXLNAP40222 546 aa7.33□□□□□ -1.24
VPS26A-208ENST00000497022 SCHIP1Q9P0W5 487 aaPredicted RBP7.33□□□□□ -1.24
VPS26A-208ENST00000497022 EML1O00423 815 aa7.32□□□□□ -1.24
VPS26A-208ENST00000497022 RAD21O60216 631 aa7.32□□□□□ -1.24
VPS26A-208ENST00000497022 ADH7P40394 386 aa7.32□□□□□ -1.24
VPS26A-208ENST00000497022 ADGRE1Q14246 886 aa7.32□□□□□ -1.24
VPS26A-208ENST00000497022 TEAD4Q15561 434 aa7.32□□□□□ -1.24
VPS26A-208ENST00000497022 UBTFP17480 764 aaKnown RBP7.31□□□□□ -1.24
VPS26A-208ENST00000497022 SOX11P35716 441 aa7.31□□□□□ -1.24
VPS26A-208ENST00000497022 SEMA3FQ13275 785 aa7.31□□□□□ -1.24
VPS26A-208ENST00000497022 GRIK4Q16099 956 aa7.31□□□□□ -1.24
VPS26A-208ENST00000497022 LRRC69Q6ZNQ3 347 aa7.31□□□□□ -1.24
VPS26A-208ENST00000497022 ELNP15502 786 aa7.3□□□□□ -1.24
VPS26A-208ENST00000497022 NRG1Q02297 640 aaPredicted RBP7.3□□□□□ -1.24
VPS26A-208ENST00000497022 MBTPS1Q14703 1052 aa7.3□□□□□ -1.24
VPS26A-208ENST00000497022 C20orf204Q6ZNR8 217 aa7.3□□□□□ -1.24
VPS26A-208ENST00000497022 TXNRD3Q86VQ6 643 aa7.3□□□□□ -1.24
VPS26A-208ENST00000497022 ZDHHC1Q8WTX9 485 aa7.3□□□□□ -1.24
VPS26A-208ENST00000497022 L3MBTL2Q969R5 705 aa7.3□□□□□ -1.24
VPS26A-208ENST00000497022 SLC30A3Q99726 388 aa7.3□□□□□ -1.24
VPS26A-208ENST00000497022 NEUROD4Q9HD90 331 aa7.3□□□□□ -1.24
VPS26A-208ENST00000497022 PCDHGA11Q9Y5H2 935 aa7.3□□□□□ -1.24
VPS26A-208ENST00000497022 PARP3Q9Y6F1 533 aa7.3□□□□□ -1.24
VPS26A-208ENST00000497022 BTBD11A6QL63 1104 aa7.29□□□□□ -1.24
VPS26A-208ENST00000497022 NOS2P35228 1153 aa7.29□□□□□ -1.24
VPS26A-208ENST00000497022 SPEM2Q0P670 501 aa7.29□□□□□ -1.24
VPS26A-208ENST00000497022 WWC1Q8IX03 1113 aa7.29□□□□□ -1.24
VPS26A-208ENST00000497022 LILRB5O75023 590 aa7.28□□□□□ -1.24
VPS26A-208ENST00000497022 KCNQ4P56696 695 aa7.28□□□□□ -1.24
VPS26A-208ENST00000497022 SFSWAPQ12872 951 aaKnown RBP7.28□□□□□ -1.24
VPS26A-208ENST00000497022 C8orf86Q6ZUL3 223 aa7.28□□□□□ -1.24
VPS26A-208ENST00000497022 C7orf43Q8WVR3 580 aa7.28□□□□□ -1.24
VPS26A-208ENST00000497022 LENG1Q96BZ8 264 aaPredicted RBP7.28□□□□□ -1.24
VPS26A-208ENST00000497022 LZTS3O60299 673 aaPredicted RBP7.27□□□□□ -1.25
VPS26A-208ENST00000497022 SELPP16109 830 aa7.27□□□□□ -1.25
VPS26A-208ENST00000497022 EML3Q32P44 896 aa7.27□□□□□ -1.25
VPS26A-208ENST00000497022 TRAPPC3LQ5T215 181 aa7.27□□□□□ -1.25
VPS26A-208ENST00000497022 ALG2Q9H553 416 aa7.27□□□□□ -1.25
VPS26A-208ENST00000497022 A0A0A0MRY4 1105 aa7.26□□□□□ -1.25
VPS26A-208ENST00000497022 HYAL3O43820 417 aaPredicted RBP7.26□□□□□ -1.25
VPS26A-208ENST00000497022 EPHA4P54764 986 aa7.26□□□□□ -1.25
VPS26A-208ENST00000497022 RAC1P63000 192 aa7.26□□□□□ -1.25
VPS26A-208ENST00000497022 ZNF358Q9NW07 568 aa7.26□□□□□ -1.25
VPS26A-208ENST00000497022 NOD1Q9Y239 953 aa7.26□□□□□ -1.25
VPS26A-208ENST00000497022 SERTM1A2A2V5 107 aa7.25□□□□□ -1.25
VPS26A-208ENST00000497022 SLC9A9Q8IVB4 645 aa7.25□□□□□ -1.25
VPS26A-208ENST00000497022 RHPN1Q8TCX5 695 aa7.25□□□□□ -1.25
VPS26A-208ENST00000497022 BRD7Q9NPI1 651 aa7.25□□□□□ -1.25
VPS26A-208ENST00000497022 ANKIB1Q9P2G1 1089 aa7.25□□□□□ -1.25
VPS26A-208ENST00000497022 ZNF232Q9UNY5 417 aa7.25□□□□□ -1.25
VPS26A-208ENST00000497022 POM121CA8CG34 1229 aa7.24□□□□□ -1.25
VPS26A-208ENST00000497022 PIK3CDO00329 1044 aa7.24□□□□□ -1.25
VPS26A-208ENST00000497022 GTF2IP78347 998 aa7.24□□□□□ -1.25
VPS26A-208ENST00000497022 C1orf53Q5VUE5 145 aa7.24□□□□□ -1.25
VPS26A-208ENST00000497022 KRTAP19-1Q8IUB9 90 aa7.24□□□□□ -1.25
VPS26A-208ENST00000497022 CLUAP1Q96AJ1 413 aa7.24□□□□□ -1.25
VPS26A-208ENST00000497022 EFCC1Q9HA90 598 aa7.24□□□□□ -1.25
VPS26A-208ENST00000497022 GOLGA2P5Q9HBQ8 144 aa7.24□□□□□ -1.25
VPS26A-208ENST00000497022 HIRAP54198 1017 aaPredicted RBP7.23□□□□□ -1.25
VPS26A-208ENST00000497022 PSME1Q06323 249 aa7.23□□□□□ -1.25
VPS26A-208ENST00000497022 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.23□□□□□ -1.25
VPS26A-208ENST00000497022 TP53INP1Q96A56 240 aa7.23□□□□□ -1.25
VPS26A-208ENST00000497022 CEP63Q96MT8 703 aa7.23□□□□□ -1.25
VPS26A-208ENST00000497022 SSBP4Q9BWG4 385 aaPredicted RBP7.23□□□□□ -1.25
VPS26A-208ENST00000497022 KCNH4Q9UQ05 1017 aa7.23□□□□□ -1.25
VPS26A-208ENST00000497022 PSMA6P60900 246 aaKnown RBP7.22□□□□□ -1.25
VPS26A-208ENST00000497022 TYRO3Q06418 890 aa7.22□□□□□ -1.25
VPS26A-208ENST00000497022 RAB44Q7Z6P3 723 aaPredicted RBP7.22□□□□□ -1.25
VPS26A-208ENST00000497022 NFATC2IPQ8NCF5 419 aa7.22□□□□□ -1.25
VPS26A-208ENST00000497022 ADAMTS19Q8TE59 1207 aa7.22□□□□□ -1.25
VPS26A-208ENST00000497022 KRTAP9-9Q9BYP9 154 aa7.22□□□□□ -1.25
VPS26A-208ENST00000497022 KRTAP9-4Q9BYQ2 154 aa7.22□□□□□ -1.25
VPS26A-208ENST00000497022 SKIP12755 728 aa7.21□□□□□ -1.26
VPS26A-208ENST00000497022 HDGFL1Q5TGJ6 251 aa7.21□□□□□ -1.26
VPS26A-208ENST00000497022 POTEAQ6S8J7 498 aa7.21□□□□□ -1.26
VPS26A-208ENST00000497022 FMR1NBQ8N0W7 255 aaPredicted RBP7.21□□□□□ -1.26
VPS26A-208ENST00000497022 FNBP4Q8N3X1 1017 aaPredicted RBP7.21□□□□□ -1.26
VPS26A-208ENST00000497022 JPH1Q9HDC5 661 aaPredicted RBP7.21□□□□□ -1.26
VPS26A-208ENST00000497022 SLC6A14Q9UN76 642 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 167.9 ms