RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 CKAP2LQ8IYA6 745 aa2.62□□□□□ -1.99
UBR4-217ENST00000497018 CCDC146Q8IYE0 955 aa2.62□□□□□ -1.99
UBR4-217ENST00000497018 GPRASP2Q96D09 838 aa2.62□□□□□ -1.99
UBR4-217ENST00000497018 USB1Q9BQ65 265 aaKnown RBP2.62□□□□□ -1.99
UBR4-217ENST00000497018 HINFPQ9BQA5 517 aa2.62□□□□□ -1.99
UBR4-217ENST00000497018 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.62□□□□□ -1.99
UBR4-217ENST00000497018 ZBED2Q9BTP6 218 aa2.62□□□□□ -1.99
UBR4-217ENST00000497018 C12orf49Q9H741 205 aa2.62□□□□□ -1.99
UBR4-217ENST00000497018 ZNF408Q9H9D4 720 aa2.62□□□□□ -1.99
UBR4-217ENST00000497018 KANSL2Q9H9L4 492 aa2.62□□□□□ -1.99
UBR4-217ENST00000497018 SNTG2Q9NY99 539 aa2.62□□□□□ -1.99
UBR4-217ENST00000497018 TTF2Q9UNY4 1162 aaKnown RBP2.62□□□□□ -1.99
UBR4-217ENST00000497018 THRAP3Q9Y2W1 955 aaKnown RBP2.62□□□□□ -1.99
UBR4-217ENST00000497018 RBM19Q9Y4C8 960 aaKnown RBP2.62□□□□□ -1.99
UBR4-217ENST00000497018 ZNF608Q9ULD9 1512 aaPredicted RBP2.62□□□□□ -1.99
UBR4-217ENST00000497018 USP31Q70CQ4 1352 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 KIF21BO75037 1637 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 PTPRMP28827 1452 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 FAM221BA6H8Z2 402 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 POTECB2RU33 542 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 WASLO00401 505 aaPredicted RBP2.61□□□□□ -1.99
UBR4-217ENST00000497018 OPLAHO14841 1288 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 ZBTB24O43167 697 aaPredicted RBP2.61□□□□□ -1.99
UBR4-217ENST00000497018 CREB3O43889 395 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 DXOO77932 396 aaKnown RBP2.61□□□□□ -1.99
UBR4-217ENST00000497018 CCNYL3P0C7X3 344 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 PBX2P40425 430 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 SCNN1DP51172 638 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 PUS10Q3MIT2 529 aaKnown RBP2.61□□□□□ -1.99
UBR4-217ENST00000497018 COX20Q5RI15 118 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 RNF20Q5VTR2 975 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 ALKBH2Q6NS38 261 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 HS2ST1Q7LGA3 356 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 LRP10Q7Z4F1 713 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.61□□□□□ -1.99
UBR4-217ENST00000497018 ARMC2Q8NEN0 867 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 MYO19Q96H55 970 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 SGSM3Q96HU1 749 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 FRMD6Q96NE9 622 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 CSRNP1Q96S65 589 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 ARHGAP9Q9BRR9 750 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 IER2Q9BTL4 223 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 NIF3L1Q9GZT8 377 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 TMX1Q9H3N1 280 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 QTRT2Q9H974 415 aaKnown RBP2.61□□□□□ -1.99
UBR4-217ENST00000497018 EVA1BQ9NVM1 165 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 SIRPGQ9P1W8 387 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 SEPT9Q9UHD8 586 aaPredicted RBP2.61□□□□□ -1.99
UBR4-217ENST00000497018 G3BP2Q9UN86 482 aaKnown RBP2.61□□□□□ -1.99
UBR4-217ENST00000497018 MSRB2Q9Y3D2 182 aa2.61□□□□□ -1.99
UBR4-217ENST00000497018 PTPRTO14522 1441 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 IFT140Q96RY7 1462 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 A0A1W2PRU2 124 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 UBAP1LF5GYI3 381 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 ARHGAP33O14559 1287 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 ZBTB39O15060 712 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 KCNQ2O43526 872 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 CDC45O75419 566 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 RGS20O76081 388 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 HOXB1P14653 301 aaPredicted RBP2.6□□□□□ -1.99
UBR4-217ENST00000497018 POU3F3P20264 500 aaPredicted RBP2.6□□□□□ -1.99
UBR4-217ENST00000497018 ST13P50502 369 aaKnown RBP2.6□□□□□ -1.99
UBR4-217ENST00000497018 MMP16P51512 607 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 HSPA2P54652 639 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 FOXK2Q01167 660 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 ORC1Q13415 861 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 RAB33AQ14088 237 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 RALBP1Q15311 655 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 NBPF20Q3BBV1 942 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 ERFEQ4G0M1 354 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 MEI1Q5TIA1 1274 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 SPTY2D1Q68D10 685 aaPredicted RBP2.6□□□□□ -1.99
UBR4-217ENST00000497018 POTEEQ6S8J3 1075 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 SAMD7Q7Z3H4 446 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 ATCAYQ86WG3 371 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 VPS37DQ86XT2 251 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 FMNL3Q8IVF7 1028 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 TEX2Q8IWB9 1127 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 STAG2Q8N3U4 1231 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 NME8Q8N427 588 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 TMC1Q8TDI8 760 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 SCG3Q8WXD2 468 aaKnown RBP2.6□□□□□ -1.99
UBR4-217ENST00000497018 JDP2Q8WYK2 163 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 RELTQ969Z4 430 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 TRIM52Q96A61 297 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 SEC16BQ96JE7 1060 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 C8orf48Q96LL4 319 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 STAC3Q96MF2 364 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 DEPDC7Q96QD5 511 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 C1QTNF2Q9BXJ5 285 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 SLC4A5Q9BY07 1137 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 UBA5Q9GZZ9 404 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 COPRSQ9NQ92 184 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 CNTN3Q9P232 1028 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 STIM2Q9P246 746 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 GGT7Q9UJ14 662 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 LRFN2Q9ULH4 789 aa2.6□□□□□ -1.99
UBR4-217ENST00000497018 BAZ1BQ9UIG0 1483 aaKnown RBP2.59□□□□□ -1.99
UBR4-217ENST00000497018 MAPKBP1O60336 1514 aa2.59□□□□□ -1.99
UBR4-217ENST00000497018 EIF1AYO14602 144 aaKnown RBP2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms