RNA–Protein interactions for RNA: ENST00000496854.1

ITGAV-208, Transcript of integrin subunit alpha V, humanhuman

TSL 3

Gene ITGAV, Length 611 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-208ENST00000496854 IFFO2Q5TF58 517 aa11.29□□□□□ -0.6
ITGAV-208ENST00000496854 RDH13Q8NBN7 331 aa11.29□□□□□ -0.6
ITGAV-208ENST00000496854 MTRQ99707 1265 aa11.29□□□□□ -0.6
ITGAV-208ENST00000496854 A0A1W2PP64 1363 aa11.28□□□□□ -0.6
ITGAV-208ENST00000496854 EDC4Q6P2E9 1401 aaKnown RBP11.28□□□□□ -0.6
ITGAV-208ENST00000496854 NME9Q86XW9 330 aa11.28□□□□□ -0.6
ITGAV-208ENST00000496854 PPP1R1BQ9UD71 204 aaPredicted RBP11.28□□□□□ -0.6
ITGAV-208ENST00000496854 QSER1Q2KHR3 1735 aa11.28□□□□□ -0.6
ITGAV-208ENST00000496854 RGPD2P0DJD1 1756 aa11.28□□□□□ -0.6
ITGAV-208ENST00000496854 COPS2P61201 443 aa11.27□□□□□ -0.61
ITGAV-208ENST00000496854 TJAP1Q5JTD0 557 aa11.27□□□□□ -0.61
ITGAV-208ENST00000496854 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.27□□□□□ -0.61
ITGAV-208ENST00000496854 CDCA7Q9BWT1 371 aaPredicted RBP11.27□□□□□ -0.61
ITGAV-208ENST00000496854 IL21Q9HBE4 155 aa11.27□□□□□ -0.61
ITGAV-208ENST00000496854 ZBTB7AO95365 584 aa11.26□□□□□ -0.61
ITGAV-208ENST00000496854 SULF1Q8IWU6 871 aa11.26□□□□□ -0.61
ITGAV-208ENST00000496854 PCDHB3Q9Y5E6 796 aa11.26□□□□□ -0.61
ITGAV-208ENST00000496854 YY1P25490 414 aa11.25□□□□□ -0.61
ITGAV-208ENST00000496854 MDM2Q00987 491 aaPredicted RBP11.25□□□□□ -0.61
ITGAV-208ENST00000496854 TXNRD1Q16881 649 aa11.25□□□□□ -0.61
ITGAV-208ENST00000496854 COL24A1Q17RW2 1714 aa11.25□□□□□ -0.61
ITGAV-208ENST00000496854 LY75O60449 1722 aa11.24□□□□□ -0.61
ITGAV-208ENST00000496854 ACSBG1Q96GR2 724 aa11.24□□□□□ -0.61
ITGAV-208ENST00000496854 CARD11Q9BXL7 1154 aa11.24□□□□□ -0.61
ITGAV-208ENST00000496854 ACTN4O43707 911 aaKnown RBP11.23□□□□□ -0.61
ITGAV-208ENST00000496854 KIF20BQ96Q89 1820 aa11.23□□□□□ -0.61
ITGAV-208ENST00000496854 EXOC5O00471 708 aa11.22□□□□□ -0.61
ITGAV-208ENST00000496854 MEGF6O75095 1541 aa11.22□□□□□ -0.61
ITGAV-208ENST00000496854 SLC15A2Q16348 729 aa11.22□□□□□ -0.61
ITGAV-208ENST00000496854 ANKRD24Q8TF21 1146 aa11.22□□□□□ -0.61
ITGAV-208ENST00000496854 ZNF516Q92618 1163 aa11.22□□□□□ -0.61
ITGAV-208ENST00000496854 SLC12A5Q9H2X9 1139 aa11.22□□□□□ -0.61
ITGAV-208ENST00000496854 NLRP2Q9NX02 1062 aa11.22□□□□□ -0.61
ITGAV-208ENST00000496854 STK32BQ9NY57 414 aa11.22□□□□□ -0.61
ITGAV-208ENST00000496854 TONSLQ96HA7 1378 aa11.21□□□□□ -0.61
ITGAV-208ENST00000496854 IL2RBP14784 551 aa11.21□□□□□ -0.61
ITGAV-208ENST00000496854 ZNF827Q17R98 1081 aa11.21□□□□□ -0.61
ITGAV-208ENST00000496854 BLOC1S3Q6QNY0 202 aa11.21□□□□□ -0.61
ITGAV-208ENST00000496854 TMC1Q8TDI8 760 aa11.21□□□□□ -0.61
ITGAV-208ENST00000496854 NSD2O96028 1365 aa11.2□□□□□ -0.62
ITGAV-208ENST00000496854 HDGFL2Q7Z4V5 671 aaPredicted RBP11.2□□□□□ -0.62
ITGAV-208ENST00000496854 TOGARAM1Q9Y4F4 1720 aa11.2□□□□□ -0.62
ITGAV-208ENST00000496854 CLCN1P35523 988 aa11.19□□□□□ -0.62
ITGAV-208ENST00000496854 FHDC1Q9C0D6 1143 aaPredicted RBP11.19□□□□□ -0.62
ITGAV-208ENST00000496854 MTFR1LQ9H019 292 aa11.19□□□□□ -0.62
ITGAV-208ENST00000496854 LRRC4BQ9NT99 713 aa11.19□□□□□ -0.62
ITGAV-208ENST00000496854 GOLGB1Q14789 3259 aaKnown RBP11.19□□□□□ -0.62
ITGAV-208ENST00000496854 C5P01031 1676 aa11.18□□□□□ -0.62
ITGAV-208ENST00000496854 CHD4Q14839 1912 aa11.18□□□□□ -0.62
ITGAV-208ENST00000496854 TESK2Q96S53 571 aa11.18□□□□□ -0.62
ITGAV-208ENST00000496854 GPCPD1Q9NPB8 672 aa11.18□□□□□ -0.62
ITGAV-208ENST00000496854 MAP3K19Q56UN5 1328 aa11.17□□□□□ -0.62
ITGAV-208ENST00000496854 ZPR1O75312 459 aa11.17□□□□□ -0.62
ITGAV-208ENST00000496854 GCGRP47871 477 aa11.17□□□□□ -0.62
ITGAV-208ENST00000496854 ANKRD26Q9UPS8 1709 aa11.17□□□□□ -0.62
ITGAV-208ENST00000496854 RTL1A6NKG5 1358 aa11.16□□□□□ -0.62
ITGAV-208ENST00000496854 ANKRD36BQ8N2N9 1353 aa11.16□□□□□ -0.62
ITGAV-208ENST00000496854 MAP3K5Q99683 1374 aa11.16□□□□□ -0.62
ITGAV-208ENST00000496854 PKD1L3Q7Z443 1732 aa11.16□□□□□ -0.62
ITGAV-208ENST00000496854 PUS10Q3MIT2 529 aaKnown RBP11.16□□□□□ -0.62
ITGAV-208ENST00000496854 NKX2-3Q8TAU0 364 aa11.16□□□□□ -0.62
ITGAV-208ENST00000496854 IP6K1Q92551 441 aa11.16□□□□□ -0.62
ITGAV-208ENST00000496854 LTV1Q96GA3 475 aaPredicted RBP11.16□□□□□ -0.62
ITGAV-208ENST00000496854 SYT17Q9BSW7 474 aa11.16□□□□□ -0.62
ITGAV-208ENST00000496854 TERF2IPQ9NYB0 399 aa11.16□□□□□ -0.62
ITGAV-208ENST00000496854 TAF1LQ8IZX4 1826 aa11.15□□□□□ -0.62
ITGAV-208ENST00000496854 FBLN1P23142 703 aa11.15□□□□□ -0.62
ITGAV-208ENST00000496854 HOXC9P31274 260 aa11.15□□□□□ -0.62
ITGAV-208ENST00000496854 TTLL12Q14166 644 aaPredicted RBP11.15□□□□□ -0.62
ITGAV-208ENST00000496854 PNPLA7Q6ZV29 1317 aa11.14□□□□□ -0.63
ITGAV-208ENST00000496854 ST20-MTHFSA0A0A6YYL1 179 aa11.14□□□□□ -0.63
ITGAV-208ENST00000496854 NR1I2O75469 434 aa11.14□□□□□ -0.63
ITGAV-208ENST00000496854 CD46P15529 392 aa11.14□□□□□ -0.63
ITGAV-208ENST00000496854 KCNQ4P56696 695 aa11.14□□□□□ -0.63
ITGAV-208ENST00000496854 FUT2Q10981 343 aa11.14□□□□□ -0.63
ITGAV-208ENST00000496854 PUS7Q96PZ0 661 aaKnown RBP11.14□□□□□ -0.63
ITGAV-208ENST00000496854 KAT6BQ8WYB5 2073 aa11.13□□□□□ -0.63
ITGAV-208ENST00000496854 DDX54Q8TDD1 881 aaKnown RBP11.13□□□□□ -0.63
ITGAV-208ENST00000496854 AK7Q96M32 723 aa11.13□□□□□ -0.63
ITGAV-208ENST00000496854 ARXQ96QS3 562 aa11.13□□□□□ -0.63
ITGAV-208ENST00000496854 ITGB4P16144 1822 aa11.12□□□□□ -0.63
ITGAV-208ENST00000496854 ATP6V1AP38606 617 aa11.12□□□□□ -0.63
ITGAV-208ENST00000496854 ZNF784Q8NCA9 323 aaPredicted RBP11.12□□□□□ -0.63
ITGAV-208ENST00000496854 COG3Q96JB2 828 aa11.12□□□□□ -0.63
ITGAV-208ENST00000496854 FAM217BQ9NTX9 383 aaPredicted RBP11.12□□□□□ -0.63
ITGAV-208ENST00000496854 USP47Q96K76 1375 aa11.12□□□□□ -0.63
ITGAV-208ENST00000496854 TLL1O43897 1013 aa11.11□□□□□ -0.63
ITGAV-208ENST00000496854 RRS1Q15050 365 aaKnown RBP11.11□□□□□ -0.63
ITGAV-208ENST00000496854 AMHR2Q16671 573 aa11.11□□□□□ -0.63
ITGAV-208ENST00000496854 SCUBE3Q8IX30 993 aa11.11□□□□□ -0.63
ITGAV-208ENST00000496854 USHBP1Q8N6Y0 703 aa11.11□□□□□ -0.63
ITGAV-208ENST00000496854 SYTL4Q96C24 671 aaPredicted RBP11.11□□□□□ -0.63
ITGAV-208ENST00000496854 TMUB1Q9BVT8 246 aa11.11□□□□□ -0.63
ITGAV-208ENST00000496854 REPIN1Q9BWE0 567 aaKnown RBP11.11□□□□□ -0.63
ITGAV-208ENST00000496854 SLC24A3Q9HC58 644 aa11.11□□□□□ -0.63
ITGAV-208ENST00000496854 SMG6Q86US8 1419 aaKnown RBP11.1□□□□□ -0.63
ITGAV-208ENST00000496854 C4BP0C0L5 1744 aa11.1□□□□□ -0.63
ITGAV-208ENST00000496854 TRIM66O15016 1216 aa11.1□□□□□ -0.63
ITGAV-208ENST00000496854 AMPHP49418 695 aa11.1□□□□□ -0.63
ITGAV-208ENST00000496854 SLC27A3Q5K4L6 730 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms