RNA–Protein interactions for RNA: ENST00000496843.1

PALMD-202, Transcript of palmdelphin, humanhuman

TSL 1 (best)

Gene PALMD, Length 5,294 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALMD-202ENST00000496843 NOP14P78316 857 aaKnown RBP6.27□□□□□ -1.4
PALMD-202ENST00000496843 STIM1Q13586 685 aa6.27□□□□□ -1.4
PALMD-202ENST00000496843 CFAP100Q494V2 611 aa6.27□□□□□ -1.4
PALMD-202ENST00000496843 PHLDB3Q6NSJ2 640 aa6.27□□□□□ -1.4
PALMD-202ENST00000496843 SDCCAG8Q86SQ7 713 aaPredicted RBP6.27□□□□□ -1.4
PALMD-202ENST00000496843 RPGRQ92834 1020 aaKnown RBP6.27□□□□□ -1.4
PALMD-202ENST00000496843 RAB3IPQ96QF0 476 aaPredicted RBP6.27□□□□□ -1.4
PALMD-202ENST00000496843 CTAGE5O15320 804 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 ATP6V1E1P36543 226 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 TUBB4BP68371 445 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 PNMA8AQ86V59 439 aaPredicted RBP6.27□□□□□ -1.41
PALMD-202ENST00000496843 FAM76AQ8TAV0 307 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 UPF3BQ9BZI7 483 aaKnown RBP6.27□□□□□ -1.41
PALMD-202ENST00000496843 BAIAP2L1Q9UHR4 511 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 PPP1R9AQ9ULJ8 1098 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 ZEB2O60315 1214 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 OPHN1O60890 802 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 KRT75O95678 551 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 ATP2A2P16615 1042 aaKnown RBP6.27□□□□□ -1.41
PALMD-202ENST00000496843 SART3Q15020 963 aaKnown RBP6.27□□□□□ -1.41
PALMD-202ENST00000496843 ERCC6LQ2NKX8 1250 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 CCDC178Q5BJE1 867 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 RPAP2Q8IXW5 612 aaPredicted RBP6.27□□□□□ -1.41
PALMD-202ENST00000496843 ARHGAP24Q8N264 748 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 GFM2Q969S9 779 aaKnown RBP6.27□□□□□ -1.41
PALMD-202ENST00000496843 ZNF396Q96N95 335 aaPredicted RBP6.27□□□□□ -1.41
PALMD-202ENST00000496843 ZNF777Q9ULD5 760 aaPredicted RBP6.27□□□□□ -1.41
PALMD-202ENST00000496843 KCNA4P22459 653 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 MCM2P49736 904 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 NEK2P51955 445 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 IRX1P78414 480 aaPredicted RBP6.27□□□□□ -1.41
PALMD-202ENST00000496843 SNW1Q13573 536 aaKnown RBP6.27□□□□□ -1.41
PALMD-202ENST00000496843 MUM1Q2TAK8 710 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 CCDC129Q6ZRS4 1044 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 STAG1Q8WVM7 1258 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 EPSTI1Q96J88 318 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 SPZ1Q9BXG8 430 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 TRIM6Q9C030 488 aaPredicted RBP6.27□□□□□ -1.41
PALMD-202ENST00000496843 CNGB3Q9NQW8 809 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 TRIM17Q9Y577 477 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 FIBPO43427 364 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 GIGYF1O75420 1035 aaPredicted RBP6.27□□□□□ -1.41
PALMD-202ENST00000496843 HNRNPCP07910 306 aaKnown RBP eCLIP6.27□□□□□ -1.41
PALMD-202ENST00000496843 NBPF10Q6P3W6 841 aaKnown RBP6.27□□□□□ -1.41
PALMD-202ENST00000496843 DDX21Q9NR30 783 aaKnown RBP eCLIP6.27□□□□□ -1.41
PALMD-202ENST00000496843 USP25Q9UHP3 1055 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 CEP131Q9UPN4 1083 aa6.27□□□□□ -1.41
PALMD-202ENST00000496843 NDUFAB1O14561 156 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 LMNAP02545 664 aaKnown RBP6.26□□□□□ -1.41
PALMD-202ENST00000496843 TUBBP07437 444 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 POLE2P56282 527 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 IRX4P78413 519 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 CCDC57Q2TAC2 916 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 ANKRD45Q5TZF3 282 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.26□□□□□ -1.41
PALMD-202ENST00000496843 TSC22D3Q99576 134 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 TSC22D4Q9Y3Q8 395 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 JRKLQ9Y4A0 524 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 ROCK1Q13464 1354 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 GOLGA8QA0A0J9YX86 632 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 GOLGA8OA6NCC3 632 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 GOLGA8NF8WBI6 632 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 WDHD1O75717 1129 aaPredicted RBP6.26□□□□□ -1.41
PALMD-202ENST00000496843 KRT5P13647 590 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 ECE1P42892 770 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 SF3B2Q13435 895 aaKnown RBP6.26□□□□□ -1.41
PALMD-202ENST00000496843 TRPC3Q13507 836 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 PRPF4BQ13523 1007 aaKnown RBP6.26□□□□□ -1.41
PALMD-202ENST00000496843 TNIP1Q15025 636 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 JMYQ8N9B5 988 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 BAG1Q99933 345 aaPredicted RBP6.26□□□□□ -1.41
PALMD-202ENST00000496843 CCDC68Q9H2F9 335 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 LMNB2Q03252 620 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 KIAA2013Q8IYS2 634 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 ARMC2Q8NEN0 867 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 KIAA1524Q8TCG1 905 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 DTNBP1Q96EV8 351 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 TSNARE1Q96NA8 513 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 SLC24A3Q9HC58 644 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 CIZ1Q9ULV3 898 aaPredicted RBP6.26□□□□□ -1.41
PALMD-202ENST00000496843 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.26□□□□□ -1.41
PALMD-202ENST00000496843 PALM3A6NDB9 673 aaPredicted RBP6.26□□□□□ -1.41
PALMD-202ENST00000496843 TUBB4AP04350 444 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 GSDMDP57764 484 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 INTS3Q68E01 1043 aaKnown RBP6.26□□□□□ -1.41
PALMD-202ENST00000496843 EHBP1Q8NDI1 1231 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 MRPL46Q9H2W6 279 aaKnown RBP6.26□□□□□ -1.41
PALMD-202ENST00000496843 Q9H521 79 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 EXOC1Q9NV70 894 aa6.26□□□□□ -1.41
PALMD-202ENST00000496843 LARP1Q6PKG0 1096 aaKnown RBP6.25□□□□□ -1.41
PALMD-202ENST00000496843 CTCFLQ8NI51 663 aaPredicted RBP6.25□□□□□ -1.41
PALMD-202ENST00000496843 CCDC77Q9BR77 488 aa6.25□□□□□ -1.41
PALMD-202ENST00000496843 ANLNQ9NQW6 1124 aa6.25□□□□□ -1.41
PALMD-202ENST00000496843 CD2APQ9Y5K6 639 aa6.25□□□□□ -1.41
PALMD-202ENST00000496843 SLU7O95391 586 aaKnown RBP6.25□□□□□ -1.41
PALMD-202ENST00000496843 GLE1Q53GS7 698 aaKnown RBP6.25□□□□□ -1.41
PALMD-202ENST00000496843 TRIM68Q6AZZ1 485 aa6.25□□□□□ -1.41
PALMD-202ENST00000496843 CACNA2D4Q7Z3S7 1137 aa6.25□□□□□ -1.41
PALMD-202ENST00000496843 RSPH3Q86UC2 560 aa6.25□□□□□ -1.41
PALMD-202ENST00000496843 TLK2Q86UE8 772 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms