RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 KIF13BQ9NQT8 1826 aa24.87■■□□□ 1.57
CTDSP1-213ENST00000496785 PDIA6Q15084 440 aa24.87■■□□□ 1.57
CTDSP1-213ENST00000496785 TSR2Q969E8 191 aaKnown RBP24.87■■□□□ 1.57
CTDSP1-213ENST00000496785 NPHP1O15259 732 aa24.85■■□□□ 1.57
CTDSP1-213ENST00000496785 HYPKQ9NX55 129 aa24.85■■□□□ 1.57
CTDSP1-213ENST00000496785 CHPF2Q9P2E5 772 aa24.85■■□□□ 1.57
CTDSP1-213ENST00000496785 NRXN2Q9P2S2 1712 aa24.84■■□□□ 1.57
CTDSP1-213ENST00000496785 ELL2O00472 640 aaPredicted RBP24.84■■□□□ 1.57
CTDSP1-213ENST00000496785 GOLGA2Q08379 1002 aa24.84■■□□□ 1.57
CTDSP1-213ENST00000496785 CCDC30Q5VVM6 783 aa24.84■■□□□ 1.57
CTDSP1-213ENST00000496785 LRP10Q7Z4F1 713 aa24.84■■□□□ 1.57
CTDSP1-213ENST00000496785 C8orf58Q8NAV2 365 aa24.84■■□□□ 1.57
CTDSP1-213ENST00000496785 FANCIQ9NVI1 1328 aa24.84■■□□□ 1.57
CTDSP1-213ENST00000496785 GPR162Q16538 588 aa24.83■■□□□ 1.57
CTDSP1-213ENST00000496785 PROSER3Q2NL68 480 aa24.83■■□□□ 1.57
CTDSP1-213ENST00000496785 TTLL7Q6ZT98 887 aa24.83■■□□□ 1.57
CTDSP1-213ENST00000496785 NIP7Q9Y221 180 aaKnown RBP eCLIP24.83■■□□□ 1.57
CTDSP1-213ENST00000496785 TWISTNBQ3B726 338 aaPredicted RBP24.82■■□□□ 1.56
CTDSP1-213ENST00000496785 GIGYF2Q6Y7W6 1299 aaKnown RBP24.82■■□□□ 1.56
CTDSP1-213ENST00000496785 CNBD1Q8NA66 436 aa24.82■■□□□ 1.56
CTDSP1-213ENST00000496785 ZBTB3Q9H5J0 574 aa24.82■■□□□ 1.56
CTDSP1-213ENST00000496785 ATP10DQ9P241 1426 aa24.82■■□□□ 1.56
CTDSP1-213ENST00000496785 ZNF521Q96K83 1311 aa24.82■■□□□ 1.56
CTDSP1-213ENST00000496785 ANXA1P04083 346 aa24.81■■□□□ 1.56
CTDSP1-213ENST00000496785 HLFQ16534 295 aa24.81■■□□□ 1.56
CTDSP1-213ENST00000496785 COPS6Q7L5N1 327 aa24.81■■□□□ 1.56
CTDSP1-213ENST00000496785 PELP1Q8IZL8 1130 aaKnown RBP24.81■■□□□ 1.56
CTDSP1-213ENST00000496785 XAGE3Q8WTP9 111 aa24.81■■□□□ 1.56
CTDSP1-213ENST00000496785 PXDNLA1KZ92 1463 aa24.81■■□□□ 1.56
CTDSP1-213ENST00000496785 AFDNP55196 1824 aaKnown RBP24.81■■□□□ 1.56
CTDSP1-213ENST00000496785 ST5P78524 1137 aa24.8■■□□□ 1.56
CTDSP1-213ENST00000496785 AIMP1Q12904 312 aaKnown RBP24.8■■□□□ 1.56
CTDSP1-213ENST00000496785 HSP90AB3PQ58FF7 597 aa24.8■■□□□ 1.56
CTDSP1-213ENST00000496785 NBPF5PQ86XG9 351 aaPredicted RBP24.8■■□□□ 1.56
CTDSP1-213ENST00000496785 STK31Q9BXU1 1019 aa24.8■■□□□ 1.56
CTDSP1-213ENST00000496785 PDZRN3Q9UPQ7 1066 aa24.8■■□□□ 1.56
CTDSP1-213ENST00000496785 GRIN3BO60391 1043 aa24.78■■□□□ 1.56
CTDSP1-213ENST00000496785 TPTE2Q6XPS3 522 aa24.78■■□□□ 1.56
CTDSP1-213ENST00000496785 TSPYL6Q8N831 410 aa24.78■■□□□ 1.56
CTDSP1-213ENST00000496785 NYXQ9GZU5 481 aa24.78■■□□□ 1.56
CTDSP1-213ENST00000496785 PARP10Q53GL7 1025 aa24.77■■□□□ 1.56
CTDSP1-213ENST00000496785 PRR5LQ6MZQ0 368 aa24.77■■□□□ 1.56
CTDSP1-213ENST00000496785 BRIP1Q9BX63 1249 aa24.77■■□□□ 1.56
CTDSP1-213ENST00000496785 NUP98P52948 1817 aa24.77■■□□□ 1.56
CTDSP1-213ENST00000496785 E9PSI1 815 aa24.76■■□□□ 1.55
CTDSP1-213ENST00000496785 PDE6BP35913 854 aa24.76■■□□□ 1.55
CTDSP1-213ENST00000496785 PLBD2Q8NHP8 589 aa24.76■■□□□ 1.55
CTDSP1-213ENST00000496785 IBTKQ9P2D0 1353 aaPredicted RBP24.76■■□□□ 1.55
CTDSP1-213ENST00000496785 A0A0G2JLW4 131 aa24.75■■□□□ 1.55
CTDSP1-213ENST00000496785 DPEP1P16444 411 aa24.75■■□□□ 1.55
CTDSP1-213ENST00000496785 GTF2E1P29083 439 aaPredicted RBP24.75■■□□□ 1.55
CTDSP1-213ENST00000496785 KIAA1551Q9HCM1 1747 aa24.75■■□□□ 1.55
CTDSP1-213ENST00000496785 DDX58O95786 925 aaKnown RBP24.74■■□□□ 1.55
CTDSP1-213ENST00000496785 EXOSC9Q06265 439 aaKnown RBP24.74■■□□□ 1.55
CTDSP1-213ENST00000496785 ANKRD13DQ6ZTN6 518 aa24.74■■□□□ 1.55
CTDSP1-213ENST00000496785 PPP1R42Q7Z4L9 355 aa24.74■■□□□ 1.55
CTDSP1-213ENST00000496785 PIM2Q9P1W9 311 aa24.74■■□□□ 1.55
CTDSP1-213ENST00000496785 ZNF34Q8IZ26 560 aa24.73■■□□□ 1.55
CTDSP1-213ENST00000496785 SPINK5Q9NQ38 1064 aaPredicted RBP24.73■■□□□ 1.55
CTDSP1-213ENST00000496785 N4BP2Q86UW6 1770 aaPredicted RBP24.72■■□□□ 1.55
CTDSP1-213ENST00000496785 H0YIN7 160 aa24.72■■□□□ 1.55
CTDSP1-213ENST00000496785 GPTP24298 496 aa24.72■■□□□ 1.55
CTDSP1-213ENST00000496785 RNF123Q5XPI4 1314 aa24.71■■□□□ 1.55
CTDSP1-213ENST00000496785 TCIRG1Q13488 830 aa24.71■■□□□ 1.55
CTDSP1-213ENST00000496785 FAM177BA6PVY3 158 aa24.7■■□□□ 1.54
CTDSP1-213ENST00000496785 VAMP4O75379 141 aa24.7■■□□□ 1.54
CTDSP1-213ENST00000496785 YBX3P16989 372 aaKnown RBP eCLIP24.7■■□□□ 1.541e-6■□□□□ 10.2
CTDSP1-213ENST00000496785 RIC3Q7Z5B4 369 aa24.7■■□□□ 1.54
CTDSP1-213ENST00000496785 C2CD5Q86YS7 1000 aa24.7■■□□□ 1.54
CTDSP1-213ENST00000496785 UBN2Q6ZU65 1347 aa24.69■■□□□ 1.54
CTDSP1-213ENST00000496785 CHRNA5P30532 468 aa24.69■■□□□ 1.54
CTDSP1-213ENST00000496785 PHAXQ9H814 394 aaKnown RBP24.69■■□□□ 1.54
CTDSP1-213ENST00000496785 BCS1LQ9Y276 419 aa24.69■■□□□ 1.54
CTDSP1-213ENST00000496785 ANKRD36CQ5JPF3 1778 aa24.69■■□□□ 1.54
CTDSP1-213ENST00000496785 KCNA3P22001 575 aa24.68■■□□□ 1.54
CTDSP1-213ENST00000496785 SLFN5Q08AF3 891 aa24.68■■□□□ 1.54
CTDSP1-213ENST00000496785 DALRD3Q5D0E6 543 aaKnown RBP24.68■■□□□ 1.54
CTDSP1-213ENST00000496785 SLC4A2P04920 1241 aa24.67■■□□□ 1.54
CTDSP1-213ENST00000496785 SUSD4Q5VX71 490 aa24.67■■□□□ 1.54
CTDSP1-213ENST00000496785 UTP14AQ9BVJ6 771 aaKnown RBP24.67■■□□□ 1.54
CTDSP1-213ENST00000496785 RIC1Q4ADV7 1423 aa24.67■■□□□ 1.54
CTDSP1-213ENST00000496785 BRCA1P38398 1863 aaKnown RBP24.66■■□□□ 1.54
CTDSP1-213ENST00000496785 ANKRD31Q8N7Z5 1873 aa24.66■■□□□ 1.54
CTDSP1-213ENST00000496785 CCDC24Q8N4L8 307 aa24.66■■□□□ 1.54
CTDSP1-213ENST00000496785 WWC3Q9ULE0 1092 aa24.66■■□□□ 1.54
CTDSP1-213ENST00000496785 DLEC1Q9Y238 1755 aa24.66■■□□□ 1.54
CTDSP1-213ENST00000496785 NTSR2O95665 410 aa24.65■■□□□ 1.54
CTDSP1-213ENST00000496785 NLRP10Q86W26 655 aa24.65■■□□□ 1.54
CTDSP1-213ENST00000496785 TTLL6Q8N841 843 aa24.65■■□□□ 1.54
CTDSP1-213ENST00000496785 CACNA1FO60840 1977 aa24.64■■□□□ 1.54
CTDSP1-213ENST00000496785 ARFGEF2Q9Y6D5 1785 aa24.64■■□□□ 1.53
CTDSP1-213ENST00000496785 TCERG1O14776 1098 aaKnown RBP24.63■■□□□ 1.53
CTDSP1-213ENST00000496785 STYK1Q6J9G0 422 aa24.63■■□□□ 1.53
CTDSP1-213ENST00000496785 NUTM1Q86Y26 1132 aa24.63■■□□□ 1.53
CTDSP1-213ENST00000496785 CNKSR1Q969H4 720 aa24.63■■□□□ 1.53
CTDSP1-213ENST00000496785 ZNF622Q969S3 477 aaKnown RBP eCLIP24.63■■□□□ 1.53
CTDSP1-213ENST00000496785 ZNF428Q96B54 188 aa24.63■■□□□ 1.53
CTDSP1-213ENST00000496785 MASTLQ96GX5 879 aa24.63■■□□□ 1.53
CTDSP1-213ENST00000496785 KLRG2A4D1S0 409 aaPredicted RBP24.62■■□□□ 1.53
CTDSP1-213ENST00000496785 SRGNP10124 158 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms