RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 BCORQ6W2J9 1755 aa29.43■■■□□ 2.3
CHRD-217ENST00000496527 ERVV-1B6SEH8 477 aa29.42■■■□□ 2.3
CHRD-217ENST00000496527 C8orf58Q8NAV2 365 aa29.42■■■□□ 2.3
CHRD-217ENST00000496527 DDX21Q9NR30 783 aaKnown RBP eCLIP29.42■■■□□ 2.3
CHRD-217ENST00000496527 MAP3K15Q6ZN16 1313 aa29.42■■■□□ 2.3
CHRD-217ENST00000496527 CARMIL3Q8ND23 1372 aa29.41■■■□□ 2.3
CHRD-217ENST00000496527 CHPF2Q9P2E5 772 aa29.41■■■□□ 2.3
CHRD-217ENST00000496527 HLFQ16534 295 aa29.4■■■□□ 2.3
CHRD-217ENST00000496527 LRP10Q7Z4F1 713 aa29.4■■■□□ 2.3
CHRD-217ENST00000496527 ZBTB3Q9H5J0 574 aa29.39■■■□□ 2.3
CHRD-217ENST00000496527 DBF4Q9UBU7 674 aaPredicted RBP29.39■■■□□ 2.3
CHRD-217ENST00000496527 KIF13BQ9NQT8 1826 aa29.38■■■□□ 2.29
CHRD-217ENST00000496527 CHMP4AQ9BY43 222 aa29.38■■■□□ 2.29
CHRD-217ENST00000496527 NIP7Q9Y221 180 aaKnown RBP eCLIP29.38■■■□□ 2.29
CHRD-217ENST00000496527 NPHP1O15259 732 aa29.37■■■□□ 2.29
CHRD-217ENST00000496527 AIMP1Q12904 312 aaKnown RBP29.37■■■□□ 2.29
CHRD-217ENST00000496527 COPS6Q7L5N1 327 aa29.37■■■□□ 2.29
CHRD-217ENST00000496527 PXDNLA1KZ92 1463 aa29.36■■■□□ 2.29
CHRD-217ENST00000496527 A0A0G2JLW4 131 aa29.36■■■□□ 2.29
CHRD-217ENST00000496527 TSPYL6Q8N831 410 aa29.36■■■□□ 2.29
CHRD-217ENST00000496527 XAGE3Q8WTP9 111 aa29.36■■■□□ 2.29
CHRD-217ENST00000496527 AFDNP55196 1824 aaKnown RBP29.36■■■□□ 2.29
CHRD-217ENST00000496527 NRXN2Q9P2S2 1712 aa29.35■■■□□ 2.29
CHRD-217ENST00000496527 DPEP1P16444 411 aa29.35■■■□□ 2.29
CHRD-217ENST00000496527 HYPKQ9NX55 129 aa29.35■■■□□ 2.29
CHRD-217ENST00000496527 FANCIQ9NVI1 1328 aa29.35■■■□□ 2.29
CHRD-217ENST00000496527 NBPF5PQ86XG9 351 aaPredicted RBP29.34■■■□□ 2.29
CHRD-217ENST00000496527 CNBD1Q8NA66 436 aa29.34■■■□□ 2.29
CHRD-217ENST00000496527 WWC3Q9ULE0 1092 aa29.34■■■□□ 2.29
CHRD-217ENST00000496527 GOLGA2Q08379 1002 aa29.33■■■□□ 2.29
CHRD-217ENST00000496527 CCDC30Q5VVM6 783 aa29.33■■■□□ 2.29
CHRD-217ENST00000496527 PRR5LQ6MZQ0 368 aa29.33■■■□□ 2.29
CHRD-217ENST00000496527 GIGYF2Q6Y7W6 1299 aaKnown RBP29.33■■■□□ 2.29
CHRD-217ENST00000496527 MYH16Q9H6N6 1097 aa29.33■■■□□ 2.29
CHRD-217ENST00000496527 YBX3P16989 372 aaKnown RBP eCLIP29.32■■■□□ 2.28
CHRD-217ENST00000496527 TWISTNBQ3B726 338 aaPredicted RBP29.32■■■□□ 2.28
CHRD-217ENST00000496527 ZNF521Q96K83 1311 aa29.31■■■□□ 2.28
CHRD-217ENST00000496527 ST5P78524 1137 aa29.31■■■□□ 2.28
CHRD-217ENST00000496527 SPINK5Q9NQ38 1064 aaPredicted RBP29.31■■■□□ 2.28
CHRD-217ENST00000496527 GRIN3BO60391 1043 aa29.3■■■□□ 2.28
CHRD-217ENST00000496527 TPTE2Q6XPS3 522 aa29.3■■■□□ 2.28
CHRD-217ENST00000496527 CCDC24Q8N4L8 307 aa29.3■■■□□ 2.28
CHRD-217ENST00000496527 N4BP2Q86UW6 1770 aaPredicted RBP29.3■■■□□ 2.28
CHRD-217ENST00000496527 ATP10DQ9P241 1426 aa29.29■■■□□ 2.28
CHRD-217ENST00000496527 FAM177BA6PVY3 158 aa29.29■■■□□ 2.28
CHRD-217ENST00000496527 CHRNA5P30532 468 aa29.29■■■□□ 2.28
CHRD-217ENST00000496527 BRIP1Q9BX63 1249 aa29.29■■■□□ 2.28
CHRD-217ENST00000496527 NUP98P52948 1817 aa29.29■■■□□ 2.28
CHRD-217ENST00000496527 KIAA1551Q9HCM1 1747 aa29.28■■■□□ 2.28
CHRD-217ENST00000496527 KCNA3P22001 575 aa29.28■■■□□ 2.28
CHRD-217ENST00000496527 GPTP24298 496 aa29.28■■■□□ 2.28
CHRD-217ENST00000496527 PIM2Q9P1W9 311 aa29.28■■■□□ 2.28
CHRD-217ENST00000496527 PDE6BP35913 854 aa29.27■■■□□ 2.28
CHRD-217ENST00000496527 EXOSC9Q06265 439 aaKnown RBP29.27■■■□□ 2.28
CHRD-217ENST00000496527 HSP90AB3PQ58FF7 597 aa29.27■■■□□ 2.28
CHRD-217ENST00000496527 ZNF34Q8IZ26 560 aa29.27■■■□□ 2.28
CHRD-217ENST00000496527 GTF2E1P29083 439 aaPredicted RBP29.26■■■□□ 2.27
CHRD-217ENST00000496527 ANKRD13DQ6ZTN6 518 aa29.26■■■□□ 2.27
CHRD-217ENST00000496527 C2CD5Q86YS7 1000 aa29.26■■■□□ 2.27
CHRD-217ENST00000496527 PLBD2Q8NHP8 589 aa29.26■■■□□ 2.27
CHRD-217ENST00000496527 STK31Q9BXU1 1019 aa29.26■■■□□ 2.27
CHRD-217ENST00000496527 NYXQ9GZU5 481 aa29.26■■■□□ 2.27
CHRD-217ENST00000496527 BCS1LQ9Y276 419 aa29.26■■■□□ 2.27
CHRD-217ENST00000496527 H0YIN7 160 aa29.25■■■□□ 2.27
CHRD-217ENST00000496527 PDZRN3Q9UPQ7 1066 aa29.25■■■□□ 2.27
CHRD-217ENST00000496527 PARP10Q53GL7 1025 aa29.24■■■□□ 2.27
CHRD-217ENST00000496527 PHAXQ9H814 394 aaKnown RBP29.24■■■□□ 2.27
CHRD-217ENST00000496527 UBN2Q6ZU65 1347 aa29.23■■■□□ 2.27
CHRD-217ENST00000496527 TCERG1O14776 1098 aaKnown RBP29.22■■■□□ 2.27
CHRD-217ENST00000496527 TCIRG1Q13488 830 aa29.22■■■□□ 2.27
CHRD-217ENST00000496527 DALRD3Q5D0E6 543 aaKnown RBP29.22■■■□□ 2.27
CHRD-217ENST00000496527 SUSD4Q5VX71 490 aa29.22■■■□□ 2.27
CHRD-217ENST00000496527 PPP1R42Q7Z4L9 355 aa29.22■■■□□ 2.27
CHRD-217ENST00000496527 E9PSI1 815 aa29.21■■■□□ 2.27
CHRD-217ENST00000496527 VAMP4O75379 141 aa29.21■■■□□ 2.27
CHRD-217ENST00000496527 RIC3Q7Z5B4 369 aa29.2■■■□□ 2.26
CHRD-217ENST00000496527 IBTKQ9P2D0 1353 aaPredicted RBP29.19■■■□□ 2.26
CHRD-217ENST00000496527 NUTM1Q86Y26 1132 aa29.19■■■□□ 2.26
CHRD-217ENST00000496527 ANKRD31Q8N7Z5 1873 aa29.19■■■□□ 2.26
CHRD-217ENST00000496527 DDX58O95786 925 aaKnown RBP29.18■■■□□ 2.26
CHRD-217ENST00000496527 SLC4A2P04920 1241 aa29.18■■■□□ 2.26
CHRD-217ENST00000496527 ZNF622Q969S3 477 aaKnown RBP eCLIP29.18■■■□□ 2.26
CHRD-217ENST00000496527 UTP14AQ9BVJ6 771 aaKnown RBP29.18■■■□□ 2.26
CHRD-217ENST00000496527 NTSR2O95665 410 aa29.17■■■□□ 2.26
CHRD-217ENST00000496527 ERFEQ4G0M1 354 aa29.17■■■□□ 2.26
CHRD-217ENST00000496527 TTLL6Q8N841 843 aa29.17■■■□□ 2.26
CHRD-217ENST00000496527 BRCA1P38398 1863 aaKnown RBP29.17■■■□□ 2.26
CHRD-217ENST00000496527 YY1P25490 414 aa29.16■■■□□ 2.26
CHRD-217ENST00000496527 SLFN5Q08AF3 891 aa29.16■■■□□ 2.26
CHRD-217ENST00000496527 NLRP10Q86W26 655 aa29.16■■■□□ 2.26
CHRD-217ENST00000496527 SRGNP10124 158 aa29.14■■■□□ 2.26
CHRD-217ENST00000496527 KLRG2A4D1S0 409 aaPredicted RBP29.13■■■□□ 2.25
CHRD-217ENST00000496527 ATP5J2-PTCD1G3V325 749 aa29.13■■■□□ 2.25
CHRD-217ENST00000496527 STYK1Q6J9G0 422 aa29.13■■■□□ 2.25
CHRD-217ENST00000496527 CDCA7LQ96GN5 454 aa29.13■■■□□ 2.25
CHRD-217ENST00000496527 MASTLQ96GX5 879 aa29.13■■■□□ 2.25
CHRD-217ENST00000496527 ISCA1Q9BUE6 129 aa29.13■■■□□ 2.25
CHRD-217ENST00000496527 ANKRD36CQ5JPF3 1778 aa29.13■■■□□ 2.25
CHRD-217ENST00000496527 ABCC12Q96J65 1359 aa29.13■■■□□ 2.25
CHRD-217ENST00000496527 DLEC1Q9Y238 1755 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms