RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 YY1P25490 414 aa22.9■■□□□ 1.26
RHBDD3-207ENST00000496342 PDIA6Q15084 440 aa22.9■■□□□ 1.26
RHBDD3-207ENST00000496342 TGFB2P61812 414 aa22.89■■□□□ 1.25
RHBDD3-207ENST00000496342 LRP10Q7Z4F1 713 aa22.89■■□□□ 1.25
RHBDD3-207ENST00000496342 IFT57Q9NWB7 429 aa22.89■■□□□ 1.25
RHBDD3-207ENST00000496342 KCNA3P22001 575 aa22.88■■□□□ 1.25
RHBDD3-207ENST00000496342 ZBTB3Q9H5J0 574 aa22.88■■□□□ 1.25
RHBDD3-207ENST00000496342 TNRC6CQ9HCJ0 1690 aaKnown RBP22.87■■□□□ 1.25
RHBDD3-207ENST00000496342 ERBB4Q15303 1308 aa22.87■■□□□ 1.25
RHBDD3-207ENST00000496342 PRR5LQ6MZQ0 368 aa22.87■■□□□ 1.25
RHBDD3-207ENST00000496342 WWC1Q8IX03 1113 aa22.87■■□□□ 1.25
RHBDD3-207ENST00000496342 MAP3K15Q6ZN16 1313 aa22.86■■□□□ 1.25
RHBDD3-207ENST00000496342 FAM177BA6PVY3 158 aa22.86■■□□□ 1.25
RHBDD3-207ENST00000496342 GNAI1P63096 354 aa22.86■■□□□ 1.25
RHBDD3-207ENST00000496342 DUSP27Q5VZP5 1158 aa22.86■■□□□ 1.25
RHBDD3-207ENST00000496342 TSR2Q969E8 191 aaKnown RBP22.86■■□□□ 1.25
RHBDD3-207ENST00000496342 SETDB2Q96T68 719 aa22.86■■□□□ 1.25
RHBDD3-207ENST00000496342 BCS1LQ9Y276 419 aa22.86■■□□□ 1.25
RHBDD3-207ENST00000496342 GOLGB1Q14789 3259 aaKnown RBP22.85■■□□□ 1.25
RHBDD3-207ENST00000496342 ELL2O00472 640 aaPredicted RBP22.85■■□□□ 1.25
RHBDD3-207ENST00000496342 CHPF2Q9P2E5 772 aa22.85■■□□□ 1.25
RHBDD3-207ENST00000496342 NIP7Q9Y221 180 aaKnown RBP eCLIP22.85■■□□□ 1.25
RHBDD3-207ENST00000496342 ZNF652Q9Y2D9 606 aa22.85■■□□□ 1.25
RHBDD3-207ENST00000496342 ARFGEF2Q9Y6D5 1785 aa22.84■■□□□ 1.25
RHBDD3-207ENST00000496342 CALD1Q05682 793 aaKnown RBP22.84■■□□□ 1.25
RHBDD3-207ENST00000496342 CCDC27Q2M243 656 aa22.84■■□□□ 1.25
RHBDD3-207ENST00000496342 HDGFL1Q5TGJ6 251 aa22.84■■□□□ 1.25
RHBDD3-207ENST00000496342 KIF6Q6ZMV9 814 aa22.84■■□□□ 1.25
RHBDD3-207ENST00000496342 UTRNP46939 3433 aa22.83■■□□□ 1.25
RHBDD3-207ENST00000496342 CLEC4GQ6UXB4 293 aa22.83■■□□□ 1.25
RHBDD3-207ENST00000496342 CNBD1Q8NA66 436 aa22.83■■□□□ 1.25
RHBDD3-207ENST00000496342 C8orf58Q8NAV2 365 aa22.83■■□□□ 1.25
RHBDD3-207ENST00000496342 GRIN3BO60391 1043 aa22.82■■□□□ 1.24
RHBDD3-207ENST00000496342 GPTP24298 496 aa22.82■■□□□ 1.24
RHBDD3-207ENST00000496342 AIMP1Q12904 312 aaKnown RBP22.82■■□□□ 1.24
RHBDD3-207ENST00000496342 XAGE3Q8WTP9 111 aa22.82■■□□□ 1.24
RHBDD3-207ENST00000496342 NPHP1O15259 732 aa22.81■■□□□ 1.24
RHBDD3-207ENST00000496342 NBPF5PQ86XG9 351 aaPredicted RBP22.81■■□□□ 1.24
RHBDD3-207ENST00000496342 C2CD5Q86YS7 1000 aa22.81■■□□□ 1.24
RHBDD3-207ENST00000496342 TSPYL6Q8N831 410 aa22.81■■□□□ 1.24
RHBDD3-207ENST00000496342 ATP10DQ9P241 1426 aa22.81■■□□□ 1.24
RHBDD3-207ENST00000496342 UBN2Q6ZU65 1347 aa22.81■■□□□ 1.24
RHBDD3-207ENST00000496342 ERVV-1B6SEH8 477 aa22.8■■□□□ 1.24
RHBDD3-207ENST00000496342 HOXB7P09629 217 aa22.8■■□□□ 1.24
RHBDD3-207ENST00000496342 COPS6Q7L5N1 327 aa22.8■■□□□ 1.24
RHBDD3-207ENST00000496342 DDX21Q9NR30 783 aaKnown RBP eCLIP22.8■■□□□ 1.24
RHBDD3-207ENST00000496342 PIM2Q9P1W9 311 aa22.8■■□□□ 1.24
RHBDD3-207ENST00000496342 SLX4Q8IY92 1834 aa22.8■■□□□ 1.24
RHBDD3-207ENST00000496342 CCDC88AQ3V6T2 1871 aa22.79■■□□□ 1.24
RHBDD3-207ENST00000496342 SBF1O95248 1867 aa22.79■■□□□ 1.24
RHBDD3-207ENST00000496342 LAMB2P55268 1798 aa22.78■■□□□ 1.24
RHBDD3-207ENST00000496342 ABCC12Q96J65 1359 aa22.78■■□□□ 1.24
RHBDD3-207ENST00000496342 ST5P78524 1137 aa22.77■■□□□ 1.24
RHBDD3-207ENST00000496342 GIGYF2Q6Y7W6 1299 aaKnown RBP22.77■■□□□ 1.24
RHBDD3-207ENST00000496342 ZNF428Q96B54 188 aa22.77■■□□□ 1.24
RHBDD3-207ENST00000496342 RGL2O15211 777 aa22.76■■□□□ 1.23
RHBDD3-207ENST00000496342 DALRD3Q5D0E6 543 aaKnown RBP22.76■■□□□ 1.23
RHBDD3-207ENST00000496342 NUTM1Q86Y26 1132 aa22.76■■□□□ 1.23
RHBDD3-207ENST00000496342 BRIP1Q9BX63 1249 aa22.76■■□□□ 1.23
RHBDD3-207ENST00000496342 SPINK5Q9NQ38 1064 aaPredicted RBP22.76■■□□□ 1.23
RHBDD3-207ENST00000496342 FANCIQ9NVI1 1328 aa22.76■■□□□ 1.23
RHBDD3-207ENST00000496342 TCERG1O14776 1098 aaKnown RBP22.75■■□□□ 1.23
RHBDD3-207ENST00000496342 ZNF34Q8IZ26 560 aa22.75■■□□□ 1.23
RHBDD3-207ENST00000496342 H0YIN7 160 aa22.74■■□□□ 1.23
RHBDD3-207ENST00000496342 SUSD4Q5VX71 490 aa22.74■■□□□ 1.23
RHBDD3-207ENST00000496342 ZNF622Q969S3 477 aaKnown RBP eCLIP22.74■■□□□ 1.23
RHBDD3-207ENST00000496342 DBF4Q9UBU7 674 aaPredicted RBP22.74■■□□□ 1.23
RHBDD3-207ENST00000496342 IL16Q14005 1332 aa22.74■■□□□ 1.23
RHBDD3-207ENST00000496342 PDE6BP35913 854 aa22.73■■□□□ 1.23
RHBDD3-207ENST00000496342 NCBP3Q53F19 620 aaKnown RBP22.73■■□□□ 1.23
RHBDD3-207ENST00000496342 ARHGAP27Q6ZUM4 889 aa22.73■■□□□ 1.23
RHBDD3-207ENST00000496342 PHAXQ9H814 394 aaKnown RBP22.73■■□□□ 1.23
RHBDD3-207ENST00000496342 DDX60Q8IY21 1712 aaKnown RBP22.72■■□□□ 1.23
RHBDD3-207ENST00000496342 ERFEQ4G0M1 354 aa22.72■■□□□ 1.23
RHBDD3-207ENST00000496342 TPTE2Q6XPS3 522 aa22.72■■□□□ 1.23
RHBDD3-207ENST00000496342 ZNF219Q9P2Y4 722 aaPredicted RBP22.72■■□□□ 1.23
RHBDD3-207ENST00000496342 FER1L6Q2WGJ9 1857 aa22.72■■□□□ 1.23
RHBDD3-207ENST00000496342 NTSR2O95665 410 aa22.71■■□□□ 1.23
RHBDD3-207ENST00000496342 WDR63Q8IWG1 891 aa22.71■■□□□ 1.23
RHBDD3-207ENST00000496342 ZNF784Q8NCA9 323 aaPredicted RBP22.71■■□□□ 1.23
RHBDD3-207ENST00000496342 GTF2E1P29083 439 aaPredicted RBP22.7■■□□□ 1.22
RHBDD3-207ENST00000496342 DIEXFQ68CQ4 756 aaKnown RBP22.7■■□□□ 1.22
RHBDD3-207ENST00000496342 TTLL6Q8N841 843 aa22.7■■□□□ 1.22
RHBDD3-207ENST00000496342 TAF1P21675 1872 aa22.7■■□□□ 1.22
RHBDD3-207ENST00000496342 CACNA1FO60840 1977 aa22.69■■□□□ 1.22
RHBDD3-207ENST00000496342 ADCY9O60503 1353 aa22.69■■□□□ 1.22
RHBDD3-207ENST00000496342 IBTKQ9P2D0 1353 aaPredicted RBP22.69■■□□□ 1.22
RHBDD3-207ENST00000496342 CCER2I3L3R5 266 aa22.69■■□□□ 1.22
RHBDD3-207ENST00000496342 SRGNP10124 158 aa22.69■■□□□ 1.22
RHBDD3-207ENST00000496342 RASSF7Q02833 373 aa22.69■■□□□ 1.22
RHBDD3-207ENST00000496342 TWISTNBQ3B726 338 aaPredicted RBP22.69■■□□□ 1.22
RHBDD3-207ENST00000496342 HYPKQ9NX55 129 aa22.69■■□□□ 1.22
RHBDD3-207ENST00000496342 TIAM2Q8IVF5 1701 aa22.68■■□□□ 1.22
RHBDD3-207ENST00000496342 ZNF521Q96K83 1311 aa22.68■■□□□ 1.22
RHBDD3-207ENST00000496342 MIER1Q8N108 512 aa22.68■■□□□ 1.22
RHBDD3-207ENST00000496342 PLBD2Q8NHP8 589 aa22.68■■□□□ 1.22
RHBDD3-207ENST00000496342 NYXQ9GZU5 481 aa22.68■■□□□ 1.22
RHBDD3-207ENST00000496342 EXOSC9Q06265 439 aaKnown RBP22.67■■□□□ 1.22
RHBDD3-207ENST00000496342 TCIRG1Q13488 830 aa22.67■■□□□ 1.22
RHBDD3-207ENST00000496342 ANKRD13DQ6ZTN6 518 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms