RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 NUP98P52948 1817 aa16.12■□□□□ 0.17
TRIM59-207ENST00000496222 ERVV-1B6SEH8 477 aa16.11■□□□□ 0.17
TRIM59-207ENST00000496222 MBIPQ9NS73 344 aa16.11■□□□□ 0.17
TRIM59-207ENST00000496222 PIM2Q9P1W9 311 aa16.11■□□□□ 0.17
TRIM59-207ENST00000496222 BCS1LQ9Y276 419 aa16.11■□□□□ 0.17
TRIM59-207ENST00000496222 LAS1LQ9Y4W2 734 aaKnown RBP16.11■□□□□ 0.17
TRIM59-207ENST00000496222 MYL6BP14649 208 aa16.1■□□□□ 0.17
TRIM59-207ENST00000496222 EIF2S2P20042 333 aaKnown RBP16.1■□□□□ 0.17
TRIM59-207ENST00000496222 CCDC24Q8N4L8 307 aa16.1■□□□□ 0.17
TRIM59-207ENST00000496222 NGEFQ8N5V2 710 aa16.1■□□□□ 0.17
TRIM59-207ENST00000496222 BRIP1Q9BX63 1249 aa16.1■□□□□ 0.17
TRIM59-207ENST00000496222 MAP3K15Q6ZN16 1313 aa16.1■□□□□ 0.17
TRIM59-207ENST00000496222 ANXA1P04083 346 aa16.09■□□□□ 0.17
TRIM59-207ENST00000496222 IFT57Q9NWB7 429 aa16.09■□□□□ 0.17
TRIM59-207ENST00000496222 ZNF652Q9Y2D9 606 aa16.09■□□□□ 0.17
TRIM59-207ENST00000496222 ADCY9O60503 1353 aa16.09■□□□□ 0.17
TRIM59-207ENST00000496222 COL11A2P13942 1736 aaPredicted RBP16.08■□□□□ 0.17
TRIM59-207ENST00000496222 HOXB7P09629 217 aa16.08■□□□□ 0.16
TRIM59-207ENST00000496222 CCDC27Q2M243 656 aa16.08■□□□□ 0.16
TRIM59-207ENST00000496222 NCBP3Q53F19 620 aaKnown RBP16.08■□□□□ 0.16
TRIM59-207ENST00000496222 DALRD3Q5D0E6 543 aaKnown RBP16.08■□□□□ 0.16
TRIM59-207ENST00000496222 SENP3-EIF4A1A0A087X0R7 540 aa16.07■□□□□ 0.16
TRIM59-207ENST00000496222 C2CD5Q86YS7 1000 aa16.07■□□□□ 0.16
TRIM59-207ENST00000496222 CNBD1Q8NA66 436 aa16.07■□□□□ 0.16
TRIM59-207ENST00000496222 NECTIN2Q92692 538 aa16.07■□□□□ 0.16
TRIM59-207ENST00000496222 NIP7Q9Y221 180 aaKnown RBP eCLIP16.07■□□□□ 0.16
TRIM59-207ENST00000496222 ATP10DQ9P241 1426 aa16.07■□□□□ 0.16
TRIM59-207ENST00000496222 KLRG2A4D1S0 409 aaPredicted RBP16.06■□□□□ 0.16
TRIM59-207ENST00000496222 GNAI1P63096 354 aa16.06■□□□□ 0.16
TRIM59-207ENST00000496222 DUSP27Q5VZP5 1158 aa16.06■□□□□ 0.16
TRIM59-207ENST00000496222 NBPF5PQ86XG9 351 aaPredicted RBP16.06■□□□□ 0.16
TRIM59-207ENST00000496222 WWC1Q8IX03 1113 aa16.06■□□□□ 0.16
TRIM59-207ENST00000496222 ZNF34Q8IZ26 560 aa16.06■□□□□ 0.16
TRIM59-207ENST00000496222 DDX21Q9NR30 783 aaKnown RBP eCLIP16.06■□□□□ 0.16
TRIM59-207ENST00000496222 UBN2Q6ZU65 1347 aa16.05■□□□□ 0.16
TRIM59-207ENST00000496222 H0YIN7 160 aa16.05■□□□□ 0.16
TRIM59-207ENST00000496222 PDE6BP35913 854 aa16.05■□□□□ 0.16
TRIM59-207ENST00000496222 CALD1Q05682 793 aaKnown RBP16.05■□□□□ 0.16
TRIM59-207ENST00000496222 GIGYF2Q6Y7W6 1299 aaKnown RBP16.05■□□□□ 0.16
TRIM59-207ENST00000496222 KIF6Q6ZMV9 814 aa16.05■□□□□ 0.16
TRIM59-207ENST00000496222 ZBTB3Q9H5J0 574 aa16.05■□□□□ 0.16
TRIM59-207ENST00000496222 SRGNP10124 158 aa16.04■□□□□ 0.16
TRIM59-207ENST00000496222 ARHGAP27Q6ZUM4 889 aa16.04■□□□□ 0.16
TRIM59-207ENST00000496222 COPS6Q7L5N1 327 aa16.04■□□□□ 0.16
TRIM59-207ENST00000496222 TTLL6Q8N841 843 aa16.04■□□□□ 0.16
TRIM59-207ENST00000496222 C8orf58Q8NAV2 365 aa16.04■□□□□ 0.16
TRIM59-207ENST00000496222 CHPF2Q9P2E5 772 aa16.04■□□□□ 0.16
TRIM59-207ENST00000496222 PDZRN3Q9UPQ7 1066 aa16.04■□□□□ 0.16
TRIM59-207ENST00000496222 ST5P78524 1137 aa16.03■□□□□ 0.16
TRIM59-207ENST00000496222 HDGFL1Q5TGJ6 251 aa16.03■□□□□ 0.16
TRIM59-207ENST00000496222 TPTE2Q6XPS3 522 aa16.03■□□□□ 0.16
TRIM59-207ENST00000496222 XAGE3Q8WTP9 111 aa16.03■□□□□ 0.16
TRIM59-207ENST00000496222 SBF1O95248 1867 aa16.03■□□□□ 0.16
TRIM59-207ENST00000496222 SUSD4Q5VX71 490 aa16.02■□□□□ 0.16
TRIM59-207ENST00000496222 SLX4Q8IY92 1834 aa16.02■□□□□ 0.16
TRIM59-207ENST00000496222 TNRC6CQ9HCJ0 1690 aaKnown RBP16.02■□□□□ 0.15
TRIM59-207ENST00000496222 ABCC12Q96J65 1359 aa16.01■□□□□ 0.15
TRIM59-207ENST00000496222 IBTKQ9P2D0 1353 aaPredicted RBP16.01■□□□□ 0.15
TRIM59-207ENST00000496222 FAM177BA6PVY3 158 aa16.01■□□□□ 0.15
TRIM59-207ENST00000496222 GPTP24298 496 aa16.01■□□□□ 0.15
TRIM59-207ENST00000496222 PRELPP51888 382 aa16.01■□□□□ 0.15
TRIM59-207ENST00000496222 STYK1Q6J9G0 422 aa16.01■□□□□ 0.15
TRIM59-207ENST00000496222 TSPYL6Q8N831 410 aa16.01■□□□□ 0.15
TRIM59-207ENST00000496222 DBF4Q9UBU7 674 aaPredicted RBP16.01■□□□□ 0.15
TRIM59-207ENST00000496222 ANKRD36CQ5JPF3 1778 aa16■□□□□ 0.15
TRIM59-207ENST00000496222 ARFGEF2Q9Y6D5 1785 aa16■□□□□ 0.15
TRIM59-207ENST00000496222 IL16Q14005 1332 aa16■□□□□ 0.15
TRIM59-207ENST00000496222 NTSR2O95665 410 aa16■□□□□ 0.15
TRIM59-207ENST00000496222 AIMP1Q12904 312 aaKnown RBP16■□□□□ 0.15
TRIM59-207ENST00000496222 NUTM1Q86Y26 1132 aa16■□□□□ 0.15
TRIM59-207ENST00000496222 TSR2Q969E8 191 aaKnown RBP16■□□□□ 0.15
TRIM59-207ENST00000496222 ZNF622Q969S3 477 aaKnown RBP eCLIP16■□□□□ 0.152e-13■□□□□ 9.9
TRIM59-207ENST00000496222 ELL2O00472 640 aaPredicted RBP15.99■□□□□ 0.15
TRIM59-207ENST00000496222 CRY2Q49AN0 593 aa15.99■□□□□ 0.15
TRIM59-207ENST00000496222 ERFEQ4G0M1 354 aa15.99■□□□□ 0.15
TRIM59-207ENST00000496222 FAM9BQ8IZU0 186 aa15.99■□□□□ 0.15
TRIM59-207ENST00000496222 MASTLQ96GX5 879 aa15.99■□□□□ 0.15
TRIM59-207ENST00000496222 NYXQ9GZU5 481 aa15.99■□□□□ 0.15
TRIM59-207ENST00000496222 RIC1Q4ADV7 1423 aa15.99■□□□□ 0.15
TRIM59-207ENST00000496222 NPHP1O15259 732 aa15.98■□□□□ 0.15
TRIM59-207ENST00000496222 TCIRG1Q13488 830 aa15.98■□□□□ 0.15
TRIM59-207ENST00000496222 FER1L6Q2WGJ9 1857 aa15.98■□□□□ 0.15
TRIM59-207ENST00000496222 C7orf43Q8WVR3 580 aa15.98■□□□□ 0.15
TRIM59-207ENST00000496222 HYPKQ9NX55 129 aa15.98■□□□□ 0.15
TRIM59-207ENST00000496222 CACNA1SQ13698 1873 aa15.97■□□□□ 0.15
TRIM59-207ENST00000496222 NFKBIEO00221 500 aa15.97■□□□□ 0.15
TRIM59-207ENST00000496222 NPR1P16066 1061 aa15.97■□□□□ 0.15
TRIM59-207ENST00000496222 RASSF7Q02833 373 aa15.97■□□□□ 0.15
TRIM59-207ENST00000496222 PARP10Q53GL7 1025 aa15.97■□□□□ 0.15
TRIM59-207ENST00000496222 C9orf131Q5VYM1 1079 aa15.97■□□□□ 0.15
TRIM59-207ENST00000496222 PRPF40BQ6NWY9 871 aaKnown RBP15.97■□□□□ 0.15
TRIM59-207ENST00000496222 ANKRD13DQ6ZTN6 518 aa15.97■□□□□ 0.15
TRIM59-207ENST00000496222 NLRP10Q86W26 655 aa15.97■□□□□ 0.15
TRIM59-207ENST00000496222 WDR63Q8IWG1 891 aa15.97■□□□□ 0.15
TRIM59-207ENST00000496222 PLBD2Q8NHP8 589 aa15.97■□□□□ 0.15
TRIM59-207ENST00000496222 CNKSR1Q969H4 720 aa15.97■□□□□ 0.15
TRIM59-207ENST00000496222 SPINK5Q9NQ38 1064 aaPredicted RBP15.97■□□□□ 0.15
TRIM59-207ENST00000496222 C21orf2O43822 256 aa15.96■□□□□ 0.15
TRIM59-207ENST00000496222 SLC10A5Q5PT55 438 aa15.96■□□□□ 0.15
TRIM59-207ENST00000496222 C3orf67Q6ZVT6 689 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms