RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 LMNB1P20700 586 aa10.72□□□□□ -0.69
VPS13B-206ENST00000496144 MASTLQ96GX5 879 aa10.72□□□□□ -0.69
VPS13B-206ENST00000496144 UTP14AQ9BVJ6 771 aaKnown RBP10.72□□□□□ -0.69
VPS13B-206ENST00000496144 GJA3Q9Y6H8 435 aa10.71□□□□□ -0.69
VPS13B-206ENST00000496144 COL15A1P39059 1388 aa10.71□□□□□ -0.69
VPS13B-206ENST00000496144 ERFEQ4G0M1 354 aa10.71□□□□□ -0.69
VPS13B-206ENST00000496144 CARMIL3Q8ND23 1372 aa10.71□□□□□ -0.69
VPS13B-206ENST00000496144 NPR1P16066 1061 aa10.71□□□□□ -0.69
VPS13B-206ENST00000496144 LRP5O75197 1615 aa10.71□□□□□ -0.7
VPS13B-206ENST00000496144 PDE4AP27815 886 aa10.71□□□□□ -0.7
VPS13B-206ENST00000496144 CHMP3Q9Y3E7 222 aa10.71□□□□□ -0.7
VPS13B-206ENST00000496144 AAMPQ13685 434 aa10.71□□□□□ -0.7
VPS13B-206ENST00000496144 BACH2Q9BYV9 841 aa10.71□□□□□ -0.7
VPS13B-206ENST00000496144 LARGE2Q8N3Y3 721 aa10.7□□□□□ -0.7
VPS13B-206ENST00000496144 LRRC4BQ9NT99 713 aa10.7□□□□□ -0.7
VPS13B-206ENST00000496144 ZNF784Q8NCA9 323 aaPredicted RBP10.7□□□□□ -0.7
VPS13B-206ENST00000496144 LMO7Q8WWI1 1683 aa10.7□□□□□ -0.7
VPS13B-206ENST00000496144 NF2P35240 595 aa10.7□□□□□ -0.7
VPS13B-206ENST00000496144 C1QTNF8P60827 252 aa10.7□□□□□ -0.7
VPS13B-206ENST00000496144 CFAP44Q96MT7 982 aa10.7□□□□□ -0.7
VPS13B-206ENST00000496144 ZBTB47Q9UFB7 747 aaPredicted RBP10.7□□□□□ -0.7
VPS13B-206ENST00000496144 CCDC30Q5VVM6 783 aa10.69□□□□□ -0.7
VPS13B-206ENST00000496144 SRP68Q9UHB9 627 aaKnown RBP10.69□□□□□ -0.7
VPS13B-206ENST00000496144 TRMT112Q9UI30 125 aaKnown RBP10.69□□□□□ -0.7
VPS13B-206ENST00000496144 LTN1O94822 1766 aa10.69□□□□□ -0.7
VPS13B-206ENST00000496144 ANP32AP39687 249 aaKnown RBP10.69□□□□□ -0.7
VPS13B-206ENST00000496144 PANK1Q8TE04 598 aa10.69□□□□□ -0.7
VPS13B-206ENST00000496144 MCM10Q7L590 875 aa10.68□□□□□ -0.7
VPS13B-206ENST00000496144 CLUAP1Q96AJ1 413 aa10.68□□□□□ -0.7
VPS13B-206ENST00000496144 FRAT2O75474 233 aaPredicted RBP10.68□□□□□ -0.7
VPS13B-206ENST00000496144 VEGFAP15692 232 aaPredicted RBP10.68□□□□□ -0.7
VPS13B-206ENST00000496144 HDGFL1Q5TGJ6 251 aa10.68□□□□□ -0.7
VPS13B-206ENST00000496144 BRIP1Q9BX63 1249 aa10.68□□□□□ -0.7
VPS13B-206ENST00000496144 GRM1Q13255 1194 aa10.67□□□□□ -0.7
VPS13B-206ENST00000496144 TMC4Q7Z404 712 aa10.67□□□□□ -0.7
VPS13B-206ENST00000496144 IPO9Q96P70 1041 aaKnown RBP10.67□□□□□ -0.7
VPS13B-206ENST00000496144 STYK1Q6J9G0 422 aa10.67□□□□□ -0.7
VPS13B-206ENST00000496144 CLEC4GQ6UXB4 293 aa10.67□□□□□ -0.7
VPS13B-206ENST00000496144 SKAP1Q86WV1 359 aa10.67□□□□□ -0.7
VPS13B-206ENST00000496144 TSR2Q969E8 191 aaKnown RBP10.67□□□□□ -0.7
VPS13B-206ENST00000496144 USP42Q9H9J4 1324 aaKnown RBP10.67□□□□□ -0.7
VPS13B-206ENST00000496144 NHSQ6T4R5 1651 aa10.67□□□□□ -0.7
VPS13B-206ENST00000496144 TNIP1Q15025 636 aa10.67□□□□□ -0.7
VPS13B-206ENST00000496144 PTF1AQ7RTS3 328 aa10.67□□□□□ -0.7
VPS13B-206ENST00000496144 NLGN2Q8NFZ4 835 aa10.67□□□□□ -0.7
VPS13B-206ENST00000496144 NECTIN2Q92692 538 aa10.67□□□□□ -0.7
VPS13B-206ENST00000496144 ABT1Q9ULW3 272 aaKnown RBP10.67□□□□□ -0.7
VPS13B-206ENST00000496144 TTLL12Q14166 644 aaPredicted RBP10.67□□□□□ -0.7
VPS13B-206ENST00000496144 PROM2Q8N271 834 aa10.67□□□□□ -0.7
VPS13B-206ENST00000496144 HYPKQ9NX55 129 aa10.67□□□□□ -0.7
VPS13B-206ENST00000496144 NOP58Q9Y2X3 529 aaKnown RBP10.67□□□□□ -0.7
VPS13B-206ENST00000496144 IGHDP01880 384 aa10.66□□□□□ -0.7
VPS13B-206ENST00000496144 PTGER2P43116 358 aa10.66□□□□□ -0.7
VPS13B-206ENST00000496144 ITPK1Q13572 414 aa10.66□□□□□ -0.7
VPS13B-206ENST00000496144 FSTL1Q12841 308 aa10.66□□□□□ -0.7
VPS13B-206ENST00000496144 LGR6Q9HBX8 967 aa10.66□□□□□ -0.7
VPS13B-206ENST00000496144 BABAM1Q9NWV8 329 aa10.66□□□□□ -0.7
VPS13B-206ENST00000496144 GPTP24298 496 aa10.66□□□□□ -0.7
VPS13B-206ENST00000496144 FRAT1Q92837 279 aaPredicted RBP10.66□□□□□ -0.7
VPS13B-206ENST00000496144 COG6Q9Y2V7 657 aa10.66□□□□□ -0.7
VPS13B-206ENST00000496144 C6orf229H3BNL8 230 aa10.66□□□□□ -0.7
VPS13B-206ENST00000496144 H7C1D1 291 aa10.66□□□□□ -0.7
VPS13B-206ENST00000496144 RRAGCQ9HB90 399 aa10.66□□□□□ -0.7
VPS13B-206ENST00000496144 ANKIB1Q9P2G1 1089 aa10.66□□□□□ -0.7
VPS13B-206ENST00000496144 HEG1Q9ULI3 1381 aa10.66□□□□□ -0.7
VPS13B-206ENST00000496144 IGHMBP2P38935 993 aaKnown RBP10.66□□□□□ -0.7
VPS13B-206ENST00000496144 EXOSC9Q06265 439 aaKnown RBP10.66□□□□□ -0.7
VPS13B-206ENST00000496144 HDAC9Q9UKV0 1011 aa10.66□□□□□ -0.7
VPS13B-206ENST00000496144 ZBTB3Q9H5J0 574 aa10.65□□□□□ -0.7
VPS13B-206ENST00000496144 ZBTB1Q9Y2K1 713 aa10.65□□□□□ -0.7
VPS13B-206ENST00000496144 RLBP1P12271 317 aa10.65□□□□□ -0.7
VPS13B-206ENST00000496144 ERICH6Q7L0X2 663 aa10.65□□□□□ -0.7
VPS13B-206ENST00000496144 PNMA8AQ86V59 439 aaPredicted RBP10.65□□□□□ -0.7
VPS13B-206ENST00000496144 HACL1Q9UJ83 578 aa10.65□□□□□ -0.7
VPS13B-206ENST00000496144 TNNQ9UQP3 1299 aa10.65□□□□□ -0.7
VPS13B-206ENST00000496144 GYS1P13807 737 aa10.65□□□□□ -0.7
VPS13B-206ENST00000496144 ERBB4Q15303 1308 aa10.65□□□□□ -0.7
VPS13B-206ENST00000496144 TOMM70O94826 608 aa10.65□□□□□ -0.71
VPS13B-206ENST00000496144 VPS37DQ86XT2 251 aa10.65□□□□□ -0.71
VPS13B-206ENST00000496144 CYP19A1P11511 503 aaPredicted RBP10.64□□□□□ -0.71
VPS13B-206ENST00000496144 ZKSCAN2Q63HK3 967 aa10.64□□□□□ -0.71
VPS13B-206ENST00000496144 MVPQ14764 893 aaKnown RBP10.64□□□□□ -0.71
VPS13B-206ENST00000496144 DPP8Q6V1X1 898 aaPredicted RBP10.64□□□□□ -0.71
VPS13B-206ENST00000496144 CDC5LQ99459 802 aaKnown RBP10.64□□□□□ -0.71
VPS13B-206ENST00000496144 PPIP5K2O43314 1243 aa10.64□□□□□ -0.71
VPS13B-206ENST00000496144 ATP10DQ9P241 1426 aa10.64□□□□□ -0.71
VPS13B-206ENST00000496144 ECE1P42892 770 aa10.64□□□□□ -0.71
VPS13B-206ENST00000496144 ZC3H4Q9UPT8 1303 aaKnown RBP10.64□□□□□ -0.71
VPS13B-206ENST00000496144 C21orf2O43822 256 aa10.64□□□□□ -0.71
VPS13B-206ENST00000496144 ALDH1L2Q3SY69 923 aa10.64□□□□□ -0.71
VPS13B-206ENST00000496144 C8orf34Q49A92 452 aa10.64□□□□□ -0.71
VPS13B-206ENST00000496144 RBM46Q8TBY0 533 aaKnown RBP10.64□□□□□ -0.71
VPS13B-206ENST00000496144 CCDC152Q4G0S7 254 aa10.63□□□□□ -0.71
VPS13B-206ENST00000496144 CHRNA5P30532 468 aa10.63□□□□□ -0.71
VPS13B-206ENST00000496144 NFIXQ14938 502 aa10.63□□□□□ -0.71
VPS13B-206ENST00000496144 IFT57Q9NWB7 429 aa10.63□□□□□ -0.71
VPS13B-206ENST00000496144 SOS1Q07889 1333 aaPredicted RBP10.63□□□□□ -0.71
VPS13B-206ENST00000496144 ZNF496Q96IT1 587 aaPredicted RBP10.63□□□□□ -0.71
VPS13B-206ENST00000496144 PPEF1O14829 653 aaPredicted RBP10.63□□□□□ -0.71
VPS13B-206ENST00000496144 BRPF1P55201 1214 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms