RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 C21orf2O43822 256 aa13.48□□□□□ -0.25
SMARCAL1-213ENST00000496037 DGKZQ13574 1117 aa13.48□□□□□ -0.25
SMARCAL1-213ENST00000496037 TMEM132AQ24JP5 1023 aa13.48□□□□□ -0.25
SMARCAL1-213ENST00000496037 USPL1Q5W0Q7 1092 aa13.48□□□□□ -0.25
SMARCAL1-213ENST00000496037 GGNBP2Q9H3C7 697 aa13.48□□□□□ -0.25
SMARCAL1-213ENST00000496037 MYH14Q7Z406 1995 aaKnown RBP13.47□□□□□ -0.25
SMARCAL1-213ENST00000496037 LTBP3Q9NS15 1303 aa13.47□□□□□ -0.25
SMARCAL1-213ENST00000496037 ERVV-2B6SEH9 535 aa13.47□□□□□ -0.25
SMARCAL1-213ENST00000496037 CA12O43570 354 aa13.47□□□□□ -0.25
SMARCAL1-213ENST00000496037 CNTROBQ8N137 903 aa13.47□□□□□ -0.25
SMARCAL1-213ENST00000496037 BBXQ8WY36 941 aaPredicted RBP13.47□□□□□ -0.25
SMARCAL1-213ENST00000496037 ZNF622Q969S3 477 aaKnown RBP eCLIP13.47□□□□□ -0.25
SMARCAL1-213ENST00000496037 GPR101Q96P66 508 aaPredicted RBP13.47□□□□□ -0.25
SMARCAL1-213ENST00000496037 PUS7Q96PZ0 661 aaKnown RBP13.47□□□□□ -0.25
SMARCAL1-213ENST00000496037 TONSLQ96HA7 1378 aa13.46□□□□□ -0.25
SMARCAL1-213ENST00000496037 PTCD1O75127 700 aaKnown RBP13.46□□□□□ -0.25
SMARCAL1-213ENST00000496037 SERPINB2P05120 415 aa13.46□□□□□ -0.25
SMARCAL1-213ENST00000496037 NFIXQ14938 502 aa13.46□□□□□ -0.25
SMARCAL1-213ENST00000496037 MAP1SQ66K74 1059 aaPredicted RBP13.46□□□□□ -0.25
SMARCAL1-213ENST00000496037 PNMA8AQ86V59 439 aaPredicted RBP13.46□□□□□ -0.25
SMARCAL1-213ENST00000496037 SPOCK2Q92563 424 aa13.46□□□□□ -0.25
SMARCAL1-213ENST00000496037 HACL1Q9UJ83 578 aa13.46□□□□□ -0.25
SMARCAL1-213ENST00000496037 LTBP1Q14766 1721 aa13.45□□□□□ -0.26
SMARCAL1-213ENST00000496037 NRXN2Q9P2S2 1712 aa13.45□□□□□ -0.26
SMARCAL1-213ENST00000496037 HSP90AB1P08238 724 aaKnown RBP13.45□□□□□ -0.26
SMARCAL1-213ENST00000496037 AFDNP55196 1824 aaKnown RBP13.44□□□□□ -0.26
SMARCAL1-213ENST00000496037 EPHX2P34913 555 aa13.44□□□□□ -0.26
SMARCAL1-213ENST00000496037 SOX10P56693 466 aa13.44□□□□□ -0.26
SMARCAL1-213ENST00000496037 CABP4P57796 275 aa13.44□□□□□ -0.26
SMARCAL1-213ENST00000496037 DCAF8Q5TAQ9 597 aa13.44□□□□□ -0.26
SMARCAL1-213ENST00000496037 CYP4F22Q6NT55 531 aa13.44□□□□□ -0.26
SMARCAL1-213ENST00000496037 PDZRN3Q9UPQ7 1066 aa13.44□□□□□ -0.26
SMARCAL1-213ENST00000496037 FER1L6Q2WGJ9 1857 aa13.44□□□□□ -0.26
SMARCAL1-213ENST00000496037 CARMIL3Q8ND23 1372 aa13.44□□□□□ -0.26
SMARCAL1-213ENST00000496037 ADAMTSL1Q8N6G6 1762 aa13.43□□□□□ -0.26
SMARCAL1-213ENST00000496037 FYB1O15117 783 aa13.43□□□□□ -0.26
SMARCAL1-213ENST00000496037 NBR1Q14596 966 aa13.43□□□□□ -0.26
SMARCAL1-213ENST00000496037 SOGA3Q5TF21 947 aa13.43□□□□□ -0.26
SMARCAL1-213ENST00000496037 CARD11Q9BXL7 1154 aa13.43□□□□□ -0.26
SMARCAL1-213ENST00000496037 DDX21Q9NR30 783 aaKnown RBP eCLIP13.43□□□□□ -0.26
SMARCAL1-213ENST00000496037 PPM1GO15355 546 aaPredicted RBP13.42□□□□□ -0.26
SMARCAL1-213ENST00000496037 MAP2K2P36507 400 aa13.42□□□□□ -0.26
SMARCAL1-213ENST00000496037 SOS1Q07889 1333 aaPredicted RBP13.41□□□□□ -0.26
SMARCAL1-213ENST00000496037 ADAMTS7Q9UKP4 1686 aa13.41□□□□□ -0.26
SMARCAL1-213ENST00000496037 PDE6BP35913 854 aa13.41□□□□□ -0.26
SMARCAL1-213ENST00000496037 INTS5Q6P9B9 1019 aaKnown RBP13.41□□□□□ -0.26
SMARCAL1-213ENST00000496037 GCC1Q96CN9 775 aa13.41□□□□□ -0.26
SMARCAL1-213ENST00000496037 EYA1Q99502 592 aa13.41□□□□□ -0.26
SMARCAL1-213ENST00000496037 NARFQ9UHQ1 456 aa13.41□□□□□ -0.26
SMARCAL1-213ENST00000496037 EMILIN1Q9Y6C2 1016 aa13.41□□□□□ -0.26
SMARCAL1-213ENST00000496037 TJP1Q07157 1748 aa13.41□□□□□ -0.26
SMARCAL1-213ENST00000496037 RNF123Q5XPI4 1314 aa13.4□□□□□ -0.26
SMARCAL1-213ENST00000496037 GSE1Q14687 1217 aa13.4□□□□□ -0.26
SMARCAL1-213ENST00000496037 COL15A1P39059 1388 aa13.4□□□□□ -0.26
SMARCAL1-213ENST00000496037 ZNF541Q9H0D2 1346 aa13.39□□□□□ -0.27
SMARCAL1-213ENST00000496037 AOC2O75106 756 aa13.39□□□□□ -0.27
SMARCAL1-213ENST00000496037 CNKSR1Q969H4 720 aa13.39□□□□□ -0.27
SMARCAL1-213ENST00000496037 ANKRD26Q9UPS8 1709 aa13.39□□□□□ -0.27
SMARCAL1-213ENST00000496037 GALR2O43603 387 aaPredicted RBP13.38□□□□□ -0.27
SMARCAL1-213ENST00000496037 BRPF1P55201 1214 aaPredicted RBP13.38□□□□□ -0.27
SMARCAL1-213ENST00000496037 BICDL1Q6ZP65 573 aa13.38□□□□□ -0.27
SMARCAL1-213ENST00000496037 KIF12Q96FN5 646 aa13.38□□□□□ -0.27
SMARCAL1-213ENST00000496037 BRIP1Q9BX63 1249 aa13.38□□□□□ -0.27
SMARCAL1-213ENST00000496037 KIF20BQ96Q89 1820 aa13.37□□□□□ -0.27
SMARCAL1-213ENST00000496037 COL11A2P13942 1736 aaPredicted RBP13.37□□□□□ -0.27
SMARCAL1-213ENST00000496037 PRPF40BQ6NWY9 871 aaKnown RBP13.37□□□□□ -0.27
SMARCAL1-213ENST00000496037 NBPF15Q8N660 670 aa13.37□□□□□ -0.27
SMARCAL1-213ENST00000496037 TLL2Q9Y6L7 1015 aa13.37□□□□□ -0.27
SMARCAL1-213ENST00000496037 NPHP1O15259 732 aa13.36□□□□□ -0.27
SMARCAL1-213ENST00000496037 CCDC93Q567U6 631 aa13.36□□□□□ -0.27
SMARCAL1-213ENST00000496037 ZNF530Q6P9A1 599 aaPredicted RBP13.36□□□□□ -0.27
SMARCAL1-213ENST00000496037 DNAJC10Q8IXB1 793 aa13.36□□□□□ -0.27
SMARCAL1-213ENST00000496037 CASP8AP2Q9UKL3 1982 aa13.36□□□□□ -0.27
SMARCAL1-213ENST00000496037 ST20-MTHFSA0A0A6YYL1 179 aa13.35□□□□□ -0.27
SMARCAL1-213ENST00000496037 LMOD1P29536 600 aaPredicted RBP13.35□□□□□ -0.27
SMARCAL1-213ENST00000496037 MTHFSP49914 203 aa13.35□□□□□ -0.27
SMARCAL1-213ENST00000496037 PLEKHO1Q53GL0 409 aaPredicted RBP13.35□□□□□ -0.27
SMARCAL1-213ENST00000496037 BCL2L12Q9HB09 334 aa13.35□□□□□ -0.27
SMARCAL1-213ENST00000496037 WASHC2AQ641Q2 1341 aa13.35□□□□□ -0.27
SMARCAL1-213ENST00000496037 ANKRD31Q8N7Z5 1873 aa13.34□□□□□ -0.27
SMARCAL1-213ENST00000496037 C1orf141Q5JVX7 400 aa13.34□□□□□ -0.27
SMARCAL1-213ENST00000496037 STYK1Q6J9G0 422 aa13.34□□□□□ -0.27
SMARCAL1-213ENST00000496037 GPC2Q8N158 579 aa13.34□□□□□ -0.27
SMARCAL1-213ENST00000496037 NFATC2IPQ8NCF5 419 aa13.34□□□□□ -0.27
SMARCAL1-213ENST00000496037 DCBLD2Q96PD2 775 aa13.34□□□□□ -0.27
SMARCAL1-213ENST00000496037 FKBP4Q02790 459 aaKnown RBP eCLIP13.33□□□□□ -0.28
SMARCAL1-213ENST00000496037 FMR1Q06787 632 aaKnown RBP eCLIP13.33□□□□□ -0.28
SMARCAL1-213ENST00000496037 CST9Q5W186 159 aa13.33□□□□□ -0.28
SMARCAL1-213ENST00000496037 CIAPIN1Q6FI81 312 aa13.33□□□□□ -0.28
SMARCAL1-213ENST00000496037 CCDC24Q8N4L8 307 aa13.33□□□□□ -0.28
SMARCAL1-213ENST00000496037 MS4A3Q96HJ5 214 aa13.33□□□□□ -0.28
SMARCAL1-213ENST00000496037 ZNF277Q9NRM2 450 aaPredicted RBP13.33□□□□□ -0.28
SMARCAL1-213ENST00000496037 ZBTB1Q9Y2K1 713 aa13.33□□□□□ -0.28
SMARCAL1-213ENST00000496037 MAP3K13O43283 966 aa13.32□□□□□ -0.28
SMARCAL1-213ENST00000496037 AMOTQ4VCS5 1084 aa13.32□□□□□ -0.28
SMARCAL1-213ENST00000496037 PRR5LQ6MZQ0 368 aa13.32□□□□□ -0.28
SMARCAL1-213ENST00000496037 MASTLQ96GX5 879 aa13.32□□□□□ -0.28
SMARCAL1-213ENST00000496037 CACNA1SQ13698 1873 aa13.31□□□□□ -0.28
SMARCAL1-213ENST00000496037 ARFGEF2Q9Y6D5 1785 aa13.31□□□□□ -0.28
SMARCAL1-213ENST00000496037 TRAF5O00463 557 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms