RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 DNAJC14Q6Y2X3 702 aaPredicted RBP6.42□□□□□ -1.38
VPS52-222ENST00000495981 RNF19BQ6ZMZ0 732 aa6.42□□□□□ -1.38
VPS52-222ENST00000495981 IGSF5Q9NSI5 407 aa6.42□□□□□ -1.38
VPS52-222ENST00000495981 KIF1AQ12756 1690 aa6.42□□□□□ -1.38
VPS52-222ENST00000495981 A0A0G2JS52 829 aa6.41□□□□□ -1.38
VPS52-222ENST00000495981 USP17L5A8MUK1 530 aa6.41□□□□□ -1.38
VPS52-222ENST00000495981 ACTN4O43707 911 aaKnown RBP6.41□□□□□ -1.38
VPS52-222ENST00000495981 SSFA2P28290 1259 aa6.41□□□□□ -1.38
VPS52-222ENST00000495981 MYT1Q01538 1121 aa6.41□□□□□ -1.38
VPS52-222ENST00000495981 BLOC1S3Q6QNY0 202 aa6.41□□□□□ -1.38
VPS52-222ENST00000495981 PNMA1Q8ND90 353 aa6.41□□□□□ -1.38
VPS52-222ENST00000495981 OCSTAMPQ9BR26 566 aa6.41□□□□□ -1.38
VPS52-222ENST00000495981 FKBPLQ9UIM3 349 aa6.41□□□□□ -1.38
VPS52-222ENST00000495981 VPS9D1Q9Y2B5 631 aa6.41□□□□□ -1.38
VPS52-222ENST00000495981 TECPR2O15040 1411 aa6.41□□□□□ -1.38
VPS52-222ENST00000495981 USP32Q8NFA0 1604 aa6.4□□□□□ -1.38
VPS52-222ENST00000495981 RBM47A0AV96 593 aaKnown RBP6.4□□□□□ -1.38
VPS52-222ENST00000495981 GIGYF1O75420 1035 aaPredicted RBP6.4□□□□□ -1.38
VPS52-222ENST00000495981 DEPDC4Q8N2C3 294 aa6.4□□□□□ -1.38
VPS52-222ENST00000495981 SYT17Q9BSW7 474 aa6.4□□□□□ -1.38
VPS52-222ENST00000495981 SPATA31A3Q5VYP0 1347 aa6.4□□□□□ -1.39
VPS52-222ENST00000495981 ADGRB2O60241 1585 aa6.4□□□□□ -1.39
VPS52-222ENST00000495981 PLCH1Q4KWH8 1693 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 CRYBG1Q9Y4K1 1723 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 FAM196BA6NMK8 535 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 USP17L15C9J2P7 530 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 USP17L10C9JJH3 530 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 USP17L13C9JLJ4 530 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 USP17L12C9JPN9 530 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 BHMG1C9JSJ3 638 aaPredicted RBP6.39□□□□□ -1.39
VPS52-222ENST00000495981 USP17L11C9JVI0 530 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 USP17L21D6R901 530 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 USP17L18D6R9N7 530 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 USP17L22D6RA61 530 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 USP17L17D6RBQ6 530 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 USP17L19D6RCP7 530 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 USP17L20D6RJB6 530 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 ARHGAP33O14559 1287 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 ZBTB7AO95365 584 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 SKIP12755 728 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 PBX2P40425 430 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 USP17L24Q0WX57 530 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 PTK7Q13308 1070 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 B4GALNT3Q6L9W6 998 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 PHTF2Q8N3S3 785 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 FHDC1Q9C0D6 1143 aaPredicted RBP6.39□□□□□ -1.39
VPS52-222ENST00000495981 MAP10Q9P2G4 905 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 AXIN2Q9Y2T1 843 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 NPHP3Q7Z494 1330 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 SPATA31E1Q6ZUB1 1445 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 NRAPQ86VF7 1730 aa6.39□□□□□ -1.39
VPS52-222ENST00000495981 PCNTO95613 3336 aa6.38□□□□□ -1.39
VPS52-222ENST00000495981 COL13A1Q5TAT6 717 aaPredicted RBP6.38□□□□□ -1.39
VPS52-222ENST00000495981 BRICD5Q6PL45 260 aa6.38□□□□□ -1.39
VPS52-222ENST00000495981 PTF1AQ7RTS3 328 aa6.38□□□□□ -1.39
VPS52-222ENST00000495981 LAPTM4BQ86VI4 370 aa6.38□□□□□ -1.39
VPS52-222ENST00000495981 THAP11Q96EK4 314 aa6.38□□□□□ -1.39
VPS52-222ENST00000495981 KRTAP3-3Q9BYR6 98 aa6.38□□□□□ -1.39
VPS52-222ENST00000495981 KRTAP3-2Q9BYR7 98 aa6.38□□□□□ -1.39
VPS52-222ENST00000495981 PIK3C2GO75747 1445 aa6.38□□□□□ -1.39
VPS52-222ENST00000495981 NRXN1Q9ULB1 1477 aa6.38□□□□□ -1.39
VPS52-222ENST00000495981 TRPM3Q9HCF6 1732 aaPredicted RBP6.37□□□□□ -1.39
VPS52-222ENST00000495981 SPATA31A5Q5VU36 1347 aa6.37□□□□□ -1.39
VPS52-222ENST00000495981 SPATA31A7Q8IWB4 1347 aa6.37□□□□□ -1.39
VPS52-222ENST00000495981 ZC3H4Q9UPT8 1303 aaKnown RBP6.37□□□□□ -1.39
VPS52-222ENST00000495981 Q3C1V9 767 aa6.37□□□□□ -1.39
VPS52-222ENST00000495981 KMT5BQ4FZB7 885 aa6.37□□□□□ -1.39
VPS52-222ENST00000495981 CCER1Q8TC90 406 aaPredicted RBP6.37□□□□□ -1.39
VPS52-222ENST00000495981 BTG4Q9NY30 223 aa6.37□□□□□ -1.39
VPS52-222ENST00000495981 KIAA1522Q9P206 1035 aaPredicted RBP6.37□□□□□ -1.39
VPS52-222ENST00000495981 MKRN1Q9UHC7 482 aaKnown RBP6.37□□□□□ -1.39
VPS52-222ENST00000495981 NWD2Q9ULI1 1742 aa6.36□□□□□ -1.39
VPS52-222ENST00000495981 RNF40O75150 1001 aa6.36□□□□□ -1.39
VPS52-222ENST00000495981 DKK1O94907 266 aa6.36□□□□□ -1.39
VPS52-222ENST00000495981 SCNN1AP37088 669 aa6.36□□□□□ -1.39
VPS52-222ENST00000495981 NCOA4Q13772 614 aa6.36□□□□□ -1.39
VPS52-222ENST00000495981 KRT28Q7Z3Y7 464 aa6.36□□□□□ -1.39
VPS52-222ENST00000495981 CLP1Q92989 425 aaKnown RBP6.36□□□□□ -1.39
VPS52-222ENST00000495981 ZFRQ96KR1 1074 aaKnown RBP6.36□□□□□ -1.39
VPS52-222ENST00000495981 USB1Q9BQ65 265 aaKnown RBP6.36□□□□□ -1.39
VPS52-222ENST00000495981 CEP126Q9P2H0 1117 aa6.36□□□□□ -1.39
VPS52-222ENST00000495981 SALL2Q9Y467 1007 aaPredicted RBP6.36□□□□□ -1.39
VPS52-222ENST00000495981 SOWAHDA6NJG2 315 aa6.35□□□□□ -1.39
VPS52-222ENST00000495981 SERPINB4P48594 390 aa6.35□□□□□ -1.39
VPS52-222ENST00000495981 SLC4A3P48751 1232 aa6.35□□□□□ -1.39
VPS52-222ENST00000495981 NBPF8Q3BBV2 869 aa6.35□□□□□ -1.39
VPS52-222ENST00000495981 NBPF14Q5TI25 921 aa6.35□□□□□ -1.39
VPS52-222ENST00000495981 FAM196AQ6ZSG2 479 aa6.35□□□□□ -1.39
VPS52-222ENST00000495981 RGPD8O14715 1765 aaPredicted RBP6.35□□□□□ -1.39
VPS52-222ENST00000495981 ALS2Q96Q42 1657 aa6.35□□□□□ -1.39
VPS52-222ENST00000495981 ADGRB1O14514 1584 aa6.35□□□□□ -1.39
VPS52-222ENST00000495981 TOPAZ1Q8N9V7 1692 aa6.34□□□□□ -1.39
VPS52-222ENST00000495981 HSPA6P17066 643 aa6.34□□□□□ -1.39
VPS52-222ENST00000495981 JUNDP17535 347 aa6.34□□□□□ -1.39
VPS52-222ENST00000495981 ARID4AP29374 1257 aaPredicted RBP6.34□□□□□ -1.39
VPS52-222ENST00000495981 LSM11P83369 360 aaKnown RBP eCLIP6.34□□□□□ -1.39
VPS52-222ENST00000495981 PTPRNQ16849 979 aa6.34□□□□□ -1.39
VPS52-222ENST00000495981 TSGA10IPQ3SY00 556 aa6.34□□□□□ -1.39
VPS52-222ENST00000495981 TRAF7Q6Q0C0 670 aa6.34□□□□□ -1.39
VPS52-222ENST00000495981 ANKRD13DQ6ZTN6 518 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms