RNA–Protein interactions for RNA: ENST00000495952.5

SURF1-204, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 2

Gene SURF1, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-204ENST00000495952 COL18A1P39060 1754 aa11.87□□□□□ -0.51
SURF1-204ENST00000495952 TEFQ10587 303 aa11.87□□□□□ -0.51
SURF1-204ENST00000495952 KIAA1211Q6ZU35 1233 aa11.87□□□□□ -0.51
SURF1-204ENST00000495952 PHAXQ9H814 394 aaKnown RBP11.87□□□□□ -0.51
SURF1-204ENST00000495952 LIMCH1Q9UPQ0 1083 aa11.87□□□□□ -0.51
SURF1-204ENST00000495952 SNX14Q9Y5W7 946 aa11.87□□□□□ -0.51
SURF1-204ENST00000495952 SYCE3A1L190 88 aa11.86□□□□□ -0.51
SURF1-204ENST00000495952 CEBPAP49715 358 aaPredicted RBP11.86□□□□□ -0.51
SURF1-204ENST00000495952 CCDC183Q5T5S1 534 aa11.86□□□□□ -0.51
SURF1-204ENST00000495952 VPS53Q5VIR6 699 aa11.86□□□□□ -0.51
SURF1-204ENST00000495952 TSHZ3Q63HK5 1081 aa11.86□□□□□ -0.51
SURF1-204ENST00000495952 CLASRPQ8N2M8 674 aaKnown RBP11.86□□□□□ -0.51
SURF1-204ENST00000495952 CHPF2Q9P2E5 772 aa11.86□□□□□ -0.51
SURF1-204ENST00000495952 NUP188Q5SRE5 1749 aa11.86□□□□□ -0.51
SURF1-204ENST00000495952 CCDC171Q6TFL3 1326 aa11.86□□□□□ -0.51
SURF1-204ENST00000495952 GLI3P10071 1580 aa11.85□□□□□ -0.51
SURF1-204ENST00000495952 ZSCAN22P10073 491 aaPredicted RBP11.85□□□□□ -0.51
SURF1-204ENST00000495952 ZNF530Q6P9A1 599 aaPredicted RBP11.85□□□□□ -0.51
SURF1-204ENST00000495952 EVI5LQ96CN4 794 aa11.85□□□□□ -0.51
SURF1-204ENST00000495952 IL1RAPL2Q9NP60 686 aa11.85□□□□□ -0.51
SURF1-204ENST00000495952 ECHDC1Q9NTX5 307 aa11.85□□□□□ -0.51
SURF1-204ENST00000495952 HYPKQ9NX55 129 aa11.85□□□□□ -0.51
SURF1-204ENST00000495952 RBM27Q9P2N5 1060 aaKnown RBP11.85□□□□□ -0.51
SURF1-204ENST00000495952 LAMA4Q16363 1823 aa11.85□□□□□ -0.51
SURF1-204ENST00000495952 UBR2Q8IWV8 1755 aa11.84□□□□□ -0.51
SURF1-204ENST00000495952 PI4KAP2A4QPH2 592 aa11.84□□□□□ -0.51
SURF1-204ENST00000495952 BTBD11A6QL63 1104 aa11.84□□□□□ -0.51
SURF1-204ENST00000495952 RNMTO43148 476 aaKnown RBP11.84□□□□□ -0.51
SURF1-204ENST00000495952 DDX58O95786 925 aaKnown RBP11.84□□□□□ -0.51
SURF1-204ENST00000495952 UBE2HP62256 183 aa11.84□□□□□ -0.51
SURF1-204ENST00000495952 C1orf141Q5JVX7 400 aa11.84□□□□□ -0.51
SURF1-204ENST00000495952 NBPF6Q5VWK0 638 aa11.84□□□□□ -0.51
SURF1-204ENST00000495952 KSR2Q6VAB6 950 aa11.84□□□□□ -0.51
SURF1-204ENST00000495952 NUTM1Q86Y26 1132 aa11.84□□□□□ -0.51
SURF1-204ENST00000495952 PI4KAP1Q8N8J0 262 aa11.84□□□□□ -0.51
SURF1-204ENST00000495952 LINS1Q8NG48 757 aa11.84□□□□□ -0.51
SURF1-204ENST00000495952 NBPF4Q96M43 638 aa11.84□□□□□ -0.51
SURF1-204ENST00000495952 UPF3BQ9BZI7 483 aaKnown RBP11.84□□□□□ -0.51
SURF1-204ENST00000495952 ALDH8A1Q9H2A2 487 aaPredicted RBP11.84□□□□□ -0.51
SURF1-204ENST00000495952 DIAPH3Q9NSV4 1193 aa11.84□□□□□ -0.51
SURF1-204ENST00000495952 PAPPAQ13219 1627 aa11.84□□□□□ -0.51
SURF1-204ENST00000495952 STX6O43752 255 aa11.83□□□□□ -0.52
SURF1-204ENST00000495952 F13A1P00488 732 aa11.83□□□□□ -0.52
SURF1-204ENST00000495952 NBPF7P0C2Y1 421 aaPredicted RBP11.83□□□□□ -0.52
SURF1-204ENST00000495952 AK2P54819 239 aa11.83□□□□□ -0.52
SURF1-204ENST00000495952 GLIPR1L2Q4G1C9 344 aa11.83□□□□□ -0.52
SURF1-204ENST00000495952 TICAM2Q86XR7 235 aa11.83□□□□□ -0.52
SURF1-204ENST00000495952 NECTIN2Q92692 538 aa11.83□□□□□ -0.52
SURF1-204ENST00000495952 IL25Q9H293 177 aa11.83□□□□□ -0.52
SURF1-204ENST00000495952 ZSWIM6Q9HCJ5 1215 aa11.83□□□□□ -0.52
SURF1-204ENST00000495952 MED23Q9ULK4 1368 aa11.82□□□□□ -0.52
SURF1-204ENST00000495952 GIGYF1O75420 1035 aaPredicted RBP11.82□□□□□ -0.52
SURF1-204ENST00000495952 ARHGEF25Q86VW2 580 aa11.82□□□□□ -0.52
SURF1-204ENST00000495952 MAP7D2Q96T17 732 aa11.82□□□□□ -0.52
SURF1-204ENST00000495952 NSFL1CQ9UNZ2 370 aaKnown RBP11.82□□□□□ -0.52
SURF1-204ENST00000495952 SMC3Q9UQE7 1217 aa11.82□□□□□ -0.52
SURF1-204ENST00000495952 TJP1Q07157 1748 aa11.82□□□□□ -0.52
SURF1-204ENST00000495952 DDX60Q8IY21 1712 aaKnown RBP11.81□□□□□ -0.52
SURF1-204ENST00000495952 NPHP4O75161 1426 aaPredicted RBP11.81□□□□□ -0.52
SURF1-204ENST00000495952 IFIT2P09913 472 aaKnown RBP11.81□□□□□ -0.52
SURF1-204ENST00000495952 PSMA5P28066 241 aa11.81□□□□□ -0.52
SURF1-204ENST00000495952 OS9Q13438 667 aaPredicted RBP11.81□□□□□ -0.52
SURF1-204ENST00000495952 ANKRD1Q15327 319 aa11.81□□□□□ -0.52
SURF1-204ENST00000495952 RUFY3Q7L099 469 aa11.81□□□□□ -0.52
SURF1-204ENST00000495952 USP48Q86UV5 1035 aa11.81□□□□□ -0.52
SURF1-204ENST00000495952 ANKLE2Q86XL3 938 aa11.81□□□□□ -0.52
SURF1-204ENST00000495952 LTV1Q96GA3 475 aaPredicted RBP11.81□□□□□ -0.52
SURF1-204ENST00000495952 LGR6Q9HBX8 967 aa11.81□□□□□ -0.52
SURF1-204ENST00000495952 DDX21Q9NR30 783 aaKnown RBP eCLIP11.81□□□□□ -0.52
SURF1-204ENST00000495952 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.81□□□□□ -0.52
SURF1-204ENST00000495952 HMG20BQ9P0W2 317 aa11.81□□□□□ -0.52
SURF1-204ENST00000495952 ELP1O95163 1332 aa11.81□□□□□ -0.52
SURF1-204ENST00000495952 DCCP43146 1447 aa11.8□□□□□ -0.52
SURF1-204ENST00000495952 GRM8O00222 908 aa11.8□□□□□ -0.52
SURF1-204ENST00000495952 PRKCSHP14314 528 aaPredicted RBP11.8□□□□□ -0.52
SURF1-204ENST00000495952 ZKSCAN1P17029 563 aaPredicted RBP11.8□□□□□ -0.52
SURF1-204ENST00000495952 EIF2S2P20042 333 aaKnown RBP11.8□□□□□ -0.52
SURF1-204ENST00000495952 NECTIN1Q15223 517 aa11.8□□□□□ -0.52
SURF1-204ENST00000495952 MTERF4Q7Z6M4 381 aaKnown RBP11.8□□□□□ -0.52
SURF1-204ENST00000495952 USHBP1Q8N6Y0 703 aa11.8□□□□□ -0.52
SURF1-204ENST00000495952 C9orf78Q9NZ63 289 aaPredicted RBP11.8□□□□□ -0.52
SURF1-204ENST00000495952 CYP46A1Q9Y6A2 500 aa11.8□□□□□ -0.52
SURF1-204ENST00000495952 TPM3P06753 285 aa11.79□□□□□ -0.52
SURF1-204ENST00000495952 CASTP20810 708 aaKnown RBP11.79□□□□□ -0.52
SURF1-204ENST00000495952 PDCP20941 246 aa11.79□□□□□ -0.52
SURF1-204ENST00000495952 SYT1P21579 422 aa11.79□□□□□ -0.52
SURF1-204ENST00000495952 HSP90AA2PQ14568 343 aaPredicted RBP11.79□□□□□ -0.52
SURF1-204ENST00000495952 TSGA10IPQ3SY00 556 aa11.79□□□□□ -0.52
SURF1-204ENST00000495952 RNF20Q5VTR2 975 aa11.79□□□□□ -0.52
SURF1-204ENST00000495952 NUTM2GQ5VZR2 741 aa11.79□□□□□ -0.52
SURF1-204ENST00000495952 PDRG1Q9NUG6 133 aa11.79□□□□□ -0.52
SURF1-204ENST00000495952 MAP3K2Q9Y2U5 619 aa11.79□□□□□ -0.52
SURF1-204ENST00000495952 PSME1Q06323 249 aa11.78□□□□□ -0.52
SURF1-204ENST00000495952 KIAA2012Q0VF49 1180 aa11.78□□□□□ -0.52
SURF1-204ENST00000495952 CWC27Q6UX04 472 aaKnown RBP11.78□□□□□ -0.52
SURF1-204ENST00000495952 C14orf37Q86TY3 774 aa11.78□□□□□ -0.52
SURF1-204ENST00000495952 RASEFQ8IZ41 740 aa11.78□□□□□ -0.52
SURF1-204ENST00000495952 MAP4K1Q92918 833 aa11.78□□□□□ -0.52
SURF1-204ENST00000495952 FUCA2Q9BTY2 467 aa11.78□□□□□ -0.52
SURF1-204ENST00000495952 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms