RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 C21orf2O43822 256 aa24.34■■□□□ 1.49
CLCNKA-207ENST00000495784 APLP1P51693 650 aa24.34■■□□□ 1.49
CLCNKA-207ENST00000495784 RRAGCQ9HB90 399 aa24.34■■□□□ 1.49
CLCNKA-207ENST00000495784 PRELPP51888 382 aa24.33■■□□□ 1.49
CLCNKA-207ENST00000495784 STYK1Q6J9G0 422 aa24.33■■□□□ 1.49
CLCNKA-207ENST00000495784 CNKSR1Q969H4 720 aa24.33■■□□□ 1.49
CLCNKA-207ENST00000495784 THUMPD2Q9BTF0 503 aaKnown RBP24.33■■□□□ 1.49
CLCNKA-207ENST00000495784 COL11A2P13942 1736 aaPredicted RBP24.32■■□□□ 1.48
CLCNKA-207ENST00000495784 RGL2O15211 777 aa24.32■■□□□ 1.48
CLCNKA-207ENST00000495784 RALBP1Q15311 655 aa24.32■■□□□ 1.48
CLCNKA-207ENST00000495784 NIP7Q9Y221 180 aaKnown RBP eCLIP24.32■■□□□ 1.48
CLCNKA-207ENST00000495784 SRGNP10124 158 aa24.31■■□□□ 1.48
CLCNKA-207ENST00000495784 MASTLQ96GX5 879 aa24.31■■□□□ 1.48
CLCNKA-207ENST00000495784 DLG5Q8TDM6 1919 aa24.31■■□□□ 1.48
CLCNKA-207ENST00000495784 TPTE2Q6XPS3 522 aa24.3■■□□□ 1.48
CLCNKA-207ENST00000495784 GLTPD2A6NH11 291 aa24.29■■□□□ 1.48
CLCNKA-207ENST00000495784 EIF4A1P60842 406 aaKnown RBP24.29■■□□□ 1.48
CLCNKA-207ENST00000495784 FSTL1Q12841 308 aa24.29■■□□□ 1.48
CLCNKA-207ENST00000495784 PRPF40BQ6NWY9 871 aaKnown RBP24.29■■□□□ 1.48
CLCNKA-207ENST00000495784 NGEFQ8N5V2 710 aa24.29■■□□□ 1.48
CLCNKA-207ENST00000495784 TNRC6CQ9HCJ0 1690 aaKnown RBP24.29■■□□□ 1.48
CLCNKA-207ENST00000495784 LAMB4A4D0S4 1761 aa24.29■■□□□ 1.48
CLCNKA-207ENST00000495784 FAM177BA6PVY3 158 aa24.28■■□□□ 1.48
CLCNKA-207ENST00000495784 KDM3BQ7LBC6 1761 aa24.28■■□□□ 1.48
CLCNKA-207ENST00000495784 HLFQ16534 295 aa24.27■■□□□ 1.48
CLCNKA-207ENST00000495784 SOGA3Q5TF21 947 aa24.27■■□□□ 1.48
CLCNKA-207ENST00000495784 TAOK3Q9H2K8 898 aa24.27■■□□□ 1.48
CLCNKA-207ENST00000495784 RRP7AQ9Y3A4 280 aaKnown RBP24.27■■□□□ 1.48
CLCNKA-207ENST00000495784 VEGFAP15692 232 aaPredicted RBP24.26■■□□□ 1.47
CLCNKA-207ENST00000495784 GTF2E1P29083 439 aaPredicted RBP24.26■■□□□ 1.47
CLCNKA-207ENST00000495784 DDX10Q13206 875 aaKnown RBP24.26■■□□□ 1.47
CLCNKA-207ENST00000495784 ERFEQ4G0M1 354 aa24.26■■□□□ 1.47
CLCNKA-207ENST00000495784 TIAM2Q8IVF5 1701 aa24.25■■□□□ 1.47
CLCNKA-207ENST00000495784 NPR1P16066 1061 aa24.25■■□□□ 1.47
CLCNKA-207ENST00000495784 KIF6Q6ZMV9 814 aa24.25■■□□□ 1.47
CLCNKA-207ENST00000495784 TSPYL4Q9UJ04 414 aa24.25■■□□□ 1.47
CLCNKA-207ENST00000495784 LTBP3Q9NS15 1303 aa24.25■■□□□ 1.47
CLCNKA-207ENST00000495784 RIPK4P57078 832 aa24.24■■□□□ 1.47
CLCNKA-207ENST00000495784 DPY19L2Q6NUT2 758 aa24.24■■□□□ 1.47
CLCNKA-207ENST00000495784 SMC1BQ8NDV3 1235 aa24.24■■□□□ 1.47
CLCNKA-207ENST00000495784 ERVV-1B6SEH8 477 aa24.23■■□□□ 1.47
CLCNKA-207ENST00000495784 MYL6BP14649 208 aa24.23■■□□□ 1.47
CLCNKA-207ENST00000495784 MAP3K15Q6ZN16 1313 aa24.23■■□□□ 1.47
CLCNKA-207ENST00000495784 SLX4Q8IY92 1834 aa24.23■■□□□ 1.47
CLCNKA-207ENST00000495784 CCDC88AQ3V6T2 1871 aa24.22■■□□□ 1.47
CLCNKA-207ENST00000495784 MYBBP1AQ9BQG0 1328 aaKnown RBP24.22■■□□□ 1.47
CLCNKA-207ENST00000495784 LMOD3Q0VAK6 560 aa24.22■■□□□ 1.47
CLCNKA-207ENST00000495784 FER1L6Q2WGJ9 1857 aa24.21■■□□□ 1.47
CLCNKA-207ENST00000495784 KLRG2A4D1S0 409 aaPredicted RBP24.21■■□□□ 1.47
CLCNKA-207ENST00000495784 CCDC93Q567U6 631 aa24.21■■□□□ 1.47
CLCNKA-207ENST00000495784 TTLL7Q6ZT98 887 aa24.21■■□□□ 1.47
CLCNKA-207ENST00000495784 NYXQ9GZU5 481 aa24.21■■□□□ 1.47
CLCNKA-207ENST00000495784 CACNA1SQ13698 1873 aa24.2■■□□□ 1.46
CLCNKA-207ENST00000495784 ERBB4Q15303 1308 aa24.2■■□□□ 1.46
CLCNKA-207ENST00000495784 TMPOP42166 694 aaKnown RBP24.2■■□□□ 1.46
CLCNKA-207ENST00000495784 ARFGEF2Q9Y6D5 1785 aa24.19■■□□□ 1.46
CLCNKA-207ENST00000495784 DNAJC5GQ8N7S2 189 aa24.19■■□□□ 1.46
CLCNKA-207ENST00000495784 C7orf43Q8WVR3 580 aa24.19■■□□□ 1.46
CLCNKA-207ENST00000495784 ZBTB3Q9H5J0 574 aa24.19■■□□□ 1.46
CLCNKA-207ENST00000495784 GPTP24298 496 aa24.17■■□□□ 1.46
CLCNKA-207ENST00000495784 NUTM1Q86Y26 1132 aa24.17■■□□□ 1.46
CLCNKA-207ENST00000495784 BABAM1Q9NWV8 329 aa24.17■■□□□ 1.46
CLCNKA-207ENST00000495784 WDR90Q96KV7 1748 aa24.16■■□□□ 1.46
CLCNKA-207ENST00000495784 EIF2S2P20042 333 aaKnown RBP24.16■■□□□ 1.46
CLCNKA-207ENST00000495784 ALDH1B1P30837 517 aa24.16■■□□□ 1.46
CLCNKA-207ENST00000495784 HTRA3P83110 453 aa24.16■■□□□ 1.46
CLCNKA-207ENST00000495784 CCDC146Q8IYE0 955 aa24.16■■□□□ 1.46
CLCNKA-207ENST00000495784 ABCC12Q96J65 1359 aa24.16■■□□□ 1.46
CLCNKA-207ENST00000495784 WDR43Q15061 677 aaKnown RBP eCLIP24.15■■□□□ 1.46
CLCNKA-207ENST00000495784 NEUROD2Q15784 382 aa24.15■■□□□ 1.46
CLCNKA-207ENST00000495784 DICER1Q9UPY3 1922 aaKnown RBP24.15■■□□□ 1.46
CLCNKA-207ENST00000495784 POTECB2RU33 542 aa24.14■■□□□ 1.45
CLCNKA-207ENST00000495784 FKBP4Q02790 459 aaKnown RBP eCLIP24.14■■□□□ 1.45
CLCNKA-207ENST00000495784 RTKN2Q8IZC4 609 aa24.14■■□□□ 1.45
CLCNKA-207ENST00000495784 UBN2Q6ZU65 1347 aa24.13■■□□□ 1.45
CLCNKA-207ENST00000495784 GIGYF2Q6Y7W6 1299 aaKnown RBP24.13■■□□□ 1.45
CLCNKA-207ENST00000495784 IBTKQ9P2D0 1353 aaPredicted RBP24.13■■□□□ 1.45
CLCNKA-207ENST00000495784 NUP98P52948 1817 aa24.12■■□□□ 1.45
CLCNKA-207ENST00000495784 DDNO94850 711 aaPredicted RBP24.12■■□□□ 1.45
CLCNKA-207ENST00000495784 CRY2Q49AN0 593 aa24.12■■□□□ 1.45
CLCNKA-207ENST00000495784 SUSD4Q5VX71 490 aa24.12■■□□□ 1.45
CLCNKA-207ENST00000495784 OLFM4Q6UX06 510 aa24.12■■□□□ 1.45
CLCNKA-207ENST00000495784 RPGRQ92834 1020 aaKnown RBP24.12■■□□□ 1.45
CLCNKA-207ENST00000495784 ZNF277Q9NRM2 450 aaPredicted RBP24.12■■□□□ 1.45
CLCNKA-207ENST00000495784 ZNF34Q8IZ26 560 aa24.11■■□□□ 1.45
CLCNKA-207ENST00000495784 RUNDC1Q96C34 613 aa24.11■■□□□ 1.45
CLCNKA-207ENST00000495784 KLRG1Q96E93 195 aa24.11■■□□□ 1.45
CLCNKA-207ENST00000495784 PDIA6Q15084 440 aa24.1■■□□□ 1.45
CLCNKA-207ENST00000495784 PPP1R42Q7Z4L9 355 aa24.1■■□□□ 1.45
CLCNKA-207ENST00000495784 ANXA1P04083 346 aa24.09■■□□□ 1.45
CLCNKA-207ENST00000495784 PROSER3Q2NL68 480 aa24.09■■□□□ 1.45
CLCNKA-207ENST00000495784 PARP10Q53GL7 1025 aa24.09■■□□□ 1.45
CLCNKA-207ENST00000495784 LRP10Q7Z4F1 713 aa24.09■■□□□ 1.45
CLCNKA-207ENST00000495784 LAS1LQ9Y4W2 734 aaKnown RBP24.09■■□□□ 1.45
CLCNKA-207ENST00000495784 RIC1Q4ADV7 1423 aa24.09■■□□□ 1.45
CLCNKA-207ENST00000495784 NTSR2O95665 410 aa24.08■■□□□ 1.45
CLCNKA-207ENST00000495784 NECTIN2Q92692 538 aa24.08■■□□□ 1.45
CLCNKA-207ENST00000495784 IQCA1LA6NCM1 817 aa24.07■■□□□ 1.44
CLCNKA-207ENST00000495784 HOXA10P31260 410 aaPredicted RBP24.07■■□□□ 1.44
CLCNKA-207ENST00000495784 CC2D2BQ6DHV5 1058 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms