RNA–Protein interactions for RNA: ENST00000495530.5

PTPRE-211, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-211ENST00000495530 RRP1P56182 461 aaKnown RBP18.64■□□□□ 0.57
PTPRE-211ENST00000495530 ZKSCAN2Q63HK3 967 aa18.64■□□□□ 0.57
PTPRE-211ENST00000495530 RBM46Q8TBY0 533 aaKnown RBP18.64■□□□□ 0.57
PTPRE-211ENST00000495530 NOB1Q9ULX3 412 aaKnown RBP18.64■□□□□ 0.57
PTPRE-211ENST00000495530 PTPRCP08575 1304 aa18.64■□□□□ 0.57
PTPRE-211ENST00000495530 RNF123Q5XPI4 1314 aa18.64■□□□□ 0.57
PTPRE-211ENST00000495530 A1BGP04217 495 aa18.63■□□□□ 0.57
PTPRE-211ENST00000495530 RC3H1Q5TC82 1133 aaKnown RBP18.63■□□□□ 0.57
PTPRE-211ENST00000495530 MSL1Q68DK7 614 aa18.63■□□□□ 0.57
PTPRE-211ENST00000495530 COL23A1Q86Y22 540 aaPredicted RBP18.63■□□□□ 0.57
PTPRE-211ENST00000495530 DDX58O95786 925 aaKnown RBP18.62■□□□□ 0.57
PTPRE-211ENST00000495530 HTRA3P83110 453 aa18.62■□□□□ 0.57
PTPRE-211ENST00000495530 ITPK1Q13572 414 aa18.62■□□□□ 0.57
PTPRE-211ENST00000495530 PDIA6Q15084 440 aa18.62■□□□□ 0.57
PTPRE-211ENST00000495530 API5Q9BZZ5 524 aaKnown RBP18.62■□□□□ 0.57
PTPRE-211ENST00000495530 CCDC87Q9NVE4 849 aa18.62■□□□□ 0.57
PTPRE-211ENST00000495530 ZNF831Q5JPB2 1677 aa18.62■□□□□ 0.57
PTPRE-211ENST00000495530 CACNA1FO60840 1977 aa18.61■□□□□ 0.57
PTPRE-211ENST00000495530 MYL6BP14649 208 aa18.61■□□□□ 0.57
PTPRE-211ENST00000495530 CRKLP46109 303 aaKnown RBP18.61■□□□□ 0.57
PTPRE-211ENST00000495530 KCNQ4P56696 695 aa18.61■□□□□ 0.57
PTPRE-211ENST00000495530 FLIIQ13045 1269 aa18.61■□□□□ 0.57
PTPRE-211ENST00000495530 ATF7IPQ6VMQ6 1270 aa18.61■□□□□ 0.57
PTPRE-211ENST00000495530 IL6STP40189 918 aaPredicted RBP18.6■□□□□ 0.57
PTPRE-211ENST00000495530 FSTL1Q12841 308 aa18.6■□□□□ 0.57
PTPRE-211ENST00000495530 PDE3AQ14432 1141 aa18.6■□□□□ 0.57
PTPRE-211ENST00000495530 CNTNAP4Q9C0A0 1308 aa18.59■□□□□ 0.57
PTPRE-211ENST00000495530 NBPF26B4DH59 902 aa18.59■□□□□ 0.57
PTPRE-211ENST00000495530 NEFLP07196 543 aa18.59■□□□□ 0.57
PTPRE-211ENST00000495530 FKBP5Q13451 457 aaPredicted RBP18.59■□□□□ 0.57
PTPRE-211ENST00000495530 NBPF10Q6P3W6 841 aaKnown RBP18.59■□□□□ 0.57
PTPRE-211ENST00000495530 C16orf71Q8IYS4 520 aaPredicted RBP18.59■□□□□ 0.57
PTPRE-211ENST00000495530 NBPF15Q8N660 670 aa18.59■□□□□ 0.57
PTPRE-211ENST00000495530 LINC00116Q8NCU8 138 aa18.59■□□□□ 0.57
PTPRE-211ENST00000495530 PHAXQ9H814 394 aaKnown RBP18.59■□□□□ 0.57
PTPRE-211ENST00000495530 C5P01031 1676 aa18.58■□□□□ 0.57
PTPRE-211ENST00000495530 PLIN1O60240 522 aa18.58■□□□□ 0.56
PTPRE-211ENST00000495530 ANXA1P04083 346 aa18.58■□□□□ 0.56
PTPRE-211ENST00000495530 PROSER3Q2NL68 480 aa18.58■□□□□ 0.56
PTPRE-211ENST00000495530 INTS5Q6P9B9 1019 aaKnown RBP18.58■□□□□ 0.56
PTPRE-211ENST00000495530 G2E3Q7L622 706 aa18.58■□□□□ 0.56
PTPRE-211ENST00000495530 FTSJ3Q8IY81 847 aaKnown RBP18.58■□□□□ 0.56
PTPRE-211ENST00000495530 NMRK2Q9NPI5 230 aa18.58■□□□□ 0.56
PTPRE-211ENST00000495530 LAMB4A4D0S4 1761 aa18.58■□□□□ 0.56
PTPRE-211ENST00000495530 COPS6Q7L5N1 327 aa18.57■□□□□ 0.56
PTPRE-211ENST00000495530 DZIP1LQ8IYY4 767 aaKnown RBP18.57■□□□□ 0.56
PTPRE-211ENST00000495530 ZBTB1Q9Y2K1 713 aa18.57■□□□□ 0.56
PTPRE-211ENST00000495530 A0A087WZG4 1122 aa18.56■□□□□ 0.56
PTPRE-211ENST00000495530 TRIM27P14373 513 aa18.56■□□□□ 0.56
PTPRE-211ENST00000495530 AIMP1Q12904 312 aaKnown RBP18.56■□□□□ 0.56
PTPRE-211ENST00000495530 ANKRD13DQ6ZTN6 518 aa18.56■□□□□ 0.56
PTPRE-211ENST00000495530 LRP10Q7Z4F1 713 aa18.56■□□□□ 0.56
PTPRE-211ENST00000495530 XAGE3Q8WTP9 111 aa18.56■□□□□ 0.56
PTPRE-211ENST00000495530 RPS6KA4O75676 772 aa18.55■□□□□ 0.56
PTPRE-211ENST00000495530 HSPA1AP0DMV8 641 aaKnown RBP18.55■□□□□ 0.56
PTPRE-211ENST00000495530 HSPA1BP0DMV9 641 aaKnown RBP18.55■□□□□ 0.56
PTPRE-211ENST00000495530 PIP4K2AP48426 406 aaPredicted RBP18.55■□□□□ 0.56
PTPRE-211ENST00000495530 EIF5P55010 431 aaKnown RBP18.55■□□□□ 0.56
PTPRE-211ENST00000495530 KSR2Q6VAB6 950 aa18.55■□□□□ 0.56
PTPRE-211ENST00000495530 FLAD1Q8NFF5 587 aa18.55■□□□□ 0.56
PTPRE-211ENST00000495530 AK7Q96M32 723 aa18.55■□□□□ 0.56
PTPRE-211ENST00000495530 RTCBQ9Y3I0 505 aaKnown RBP18.55■□□□□ 0.56
PTPRE-211ENST00000495530 ZNF330Q9Y3S2 320 aaPredicted RBP18.55■□□□□ 0.56
PTPRE-211ENST00000495530 TJP1Q07157 1748 aa18.54■□□□□ 0.56
PTPRE-211ENST00000495530 TAF1LQ8IZX4 1826 aa18.54■□□□□ 0.56
PTPRE-211ENST00000495530 KIF6Q6ZMV9 814 aa18.54■□□□□ 0.56
PTPRE-211ENST00000495530 RIC3Q7Z5B4 369 aa18.54■□□□□ 0.56
PTPRE-211ENST00000495530 PLBD2Q8NHP8 589 aa18.54■□□□□ 0.56
PTPRE-211ENST00000495530 PI4KAP2A4QPH2 592 aa18.53■□□□□ 0.56
PTPRE-211ENST00000495530 PI4KAP1Q8N8J0 262 aa18.53■□□□□ 0.56
PTPRE-211ENST00000495530 CLUAP1Q96AJ1 413 aa18.53■□□□□ 0.56
PTPRE-211ENST00000495530 GNPATO15228 680 aa18.52■□□□□ 0.56
PTPRE-211ENST00000495530 DNAAF4Q8WXU2 420 aa18.52■□□□□ 0.56
PTPRE-211ENST00000495530 CHMP4BQ9H444 224 aaKnown RBP18.52■□□□□ 0.56
PTPRE-211ENST00000495530 ERVV-1B6SEH8 477 aa18.51■□□□□ 0.55
PTPRE-211ENST00000495530 CCT4P50991 539 aaKnown RBP18.51■□□□□ 0.55
PTPRE-211ENST00000495530 NEXNQ0ZGT2 675 aa18.51■□□□□ 0.55
PTPRE-211ENST00000495530 TRAPPC3LQ5T215 181 aa18.51■□□□□ 0.55
PTPRE-211ENST00000495530 SLC4A10Q6U841 1118 aa18.51■□□□□ 0.55
PTPRE-211ENST00000495530 MAP3K2Q9Y2U5 619 aa18.51■□□□□ 0.55
PTPRE-211ENST00000495530 INTS3Q68E01 1043 aaKnown RBP18.5■□□□□ 0.55
PTPRE-211ENST00000495530 TTLL7Q6ZT98 887 aa18.5■□□□□ 0.55
PTPRE-211ENST00000495530 DZIP3Q86Y13 1208 aaKnown RBP18.5■□□□□ 0.55
PTPRE-211ENST00000495530 PANK1Q8TE04 598 aa18.5■□□□□ 0.55
PTPRE-211ENST00000495530 ABCC4O15439 1325 aa18.49■□□□□ 0.55
PTPRE-211ENST00000495530 COL5A3P25940 1745 aaPredicted RBP18.49■□□□□ 0.55
PTPRE-211ENST00000495530 F6X3S4 739 aa18.49■□□□□ 0.55
PTPRE-211ENST00000495530 TNRC6CQ9HCJ0 1690 aaKnown RBP18.49■□□□□ 0.55
PTPRE-211ENST00000495530 KIF13BQ9NQT8 1826 aa18.49■□□□□ 0.55
PTPRE-211ENST00000495530 MAP3K15Q6ZN16 1313 aa18.49■□□□□ 0.55
PTPRE-211ENST00000495530 COL15A1P39059 1388 aa18.48■□□□□ 0.55
PTPRE-211ENST00000495530 RGL2O15211 777 aa18.48■□□□□ 0.55
PTPRE-211ENST00000495530 SSFA2P28290 1259 aa18.48■□□□□ 0.55
PTPRE-211ENST00000495530 HSP90AB3PQ58FF7 597 aa18.48■□□□□ 0.55
PTPRE-211ENST00000495530 C20orf194Q5TEA3 1177 aa18.48■□□□□ 0.55
PTPRE-211ENST00000495530 PPP4R3CPQ6ZMV5 832 aa18.48■□□□□ 0.55
PTPRE-211ENST00000495530 METTL22Q9BUU2 404 aaPredicted RBP18.48■□□□□ 0.55
PTPRE-211ENST00000495530 DDX19BQ9UMR2 479 aa18.48■□□□□ 0.55
PTPRE-211ENST00000495530 TBC1D2BQ9UPU7 963 aa18.48■□□□□ 0.55
PTPRE-211ENST00000495530 C10orf71Q711Q0 1435 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms