RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 PXDNLA1KZ92 1463 aa22.22■■□□□ 1.15
SNX17-209ENST00000494893 SERPINB2P05120 415 aa22.22■■□□□ 1.15
SNX17-209ENST00000494893 DDX21Q9NR30 783 aaKnown RBP eCLIP22.22■■□□□ 1.15
SNX17-209ENST00000494893 CHPF2Q9P2E5 772 aa22.22■■□□□ 1.15
SNX17-209ENST00000494893 FANCIQ9NVI1 1328 aa22.22■■□□□ 1.15
SNX17-209ENST00000494893 CLEC4GQ6UXB4 293 aa22.21■■□□□ 1.15
SNX17-209ENST00000494893 AFDNP55196 1824 aaKnown RBP22.21■■□□□ 1.15
SNX17-209ENST00000494893 MAP3K15Q6ZN16 1313 aa22.21■■□□□ 1.15
SNX17-209ENST00000494893 RGL2O15211 777 aa22.2■■□□□ 1.14
SNX17-209ENST00000494893 CARMIL3Q8ND23 1372 aa22.2■■□□□ 1.14
SNX17-209ENST00000494893 ERVV-1B6SEH8 477 aa22.19■■□□□ 1.14
SNX17-209ENST00000494893 ZBTB3Q9H5J0 574 aa22.19■■□□□ 1.14
SNX17-209ENST00000494893 COPS6Q7L5N1 327 aa22.18■■□□□ 1.14
SNX17-209ENST00000494893 XAGE3Q8WTP9 111 aa22.18■■□□□ 1.14
SNX17-209ENST00000494893 YBX3P16989 372 aaKnown RBP eCLIP22.16■■□□□ 1.14
SNX17-209ENST00000494893 KCNA3P22001 575 aa22.16■■□□□ 1.14
SNX17-209ENST00000494893 PRR5LQ6MZQ0 368 aa22.16■■□□□ 1.14
SNX17-209ENST00000494893 KIF6Q6ZMV9 814 aa22.16■■□□□ 1.14
SNX17-209ENST00000494893 SETDB2Q96T68 719 aa22.16■■□□□ 1.14
SNX17-209ENST00000494893 DBF4Q9UBU7 674 aaPredicted RBP22.16■■□□□ 1.14
SNX17-209ENST00000494893 ZNF652Q9Y2D9 606 aa22.16■■□□□ 1.14
SNX17-209ENST00000494893 ATP10DQ9P241 1426 aa22.15■■□□□ 1.14
SNX17-209ENST00000494893 N4BP2Q86UW6 1770 aaPredicted RBP22.15■■□□□ 1.14
SNX17-209ENST00000494893 A0A0G2JLW4 131 aa22.15■■□□□ 1.14
SNX17-209ENST00000494893 DPEP1P16444 411 aa22.15■■□□□ 1.14
SNX17-209ENST00000494893 TGFB2P61812 414 aa22.15■■□□□ 1.14
SNX17-209ENST00000494893 AIMP1Q12904 312 aaKnown RBP22.15■■□□□ 1.14
SNX17-209ENST00000494893 CCDC24Q8N4L8 307 aa22.15■■□□□ 1.14
SNX17-209ENST00000494893 NIP7Q9Y221 180 aaKnown RBP eCLIP22.15■■□□□ 1.14
SNX17-209ENST00000494893 GOLGB1Q14789 3259 aaKnown RBP22.14■■□□□ 1.13
SNX17-209ENST00000494893 EXOSC9Q06265 439 aaKnown RBP22.14■■□□□ 1.13
SNX17-209ENST00000494893 TWISTNBQ3B726 338 aaPredicted RBP22.14■■□□□ 1.13
SNX17-209ENST00000494893 GIGYF2Q6Y7W6 1299 aaKnown RBP22.14■■□□□ 1.13
SNX17-209ENST00000494893 WWC3Q9ULE0 1092 aa22.14■■□□□ 1.13
SNX17-209ENST00000494893 NUP98P52948 1817 aa22.13■■□□□ 1.13
SNX17-209ENST00000494893 UBN2Q6ZU65 1347 aa22.13■■□□□ 1.13
SNX17-209ENST00000494893 CHRNA5P30532 468 aa22.13■■□□□ 1.13
SNX17-209ENST00000494893 ZNF34Q8IZ26 560 aa22.13■■□□□ 1.13
SNX17-209ENST00000494893 PHAXQ9H814 394 aaKnown RBP22.13■■□□□ 1.13
SNX17-209ENST00000494893 ANKRD31Q8N7Z5 1873 aa22.12■■□□□ 1.13
SNX17-209ENST00000494893 HYPKQ9NX55 129 aa22.12■■□□□ 1.13
SNX17-209ENST00000494893 TCERG1O14776 1098 aaKnown RBP22.11■■□□□ 1.13
SNX17-209ENST00000494893 VAMP4O75379 141 aa22.11■■□□□ 1.13
SNX17-209ENST00000494893 GPTP24298 496 aa22.11■■□□□ 1.13
SNX17-209ENST00000494893 GOLGA2Q08379 1002 aa22.11■■□□□ 1.13
SNX17-209ENST00000494893 PELP1Q8IZL8 1130 aaKnown RBP22.11■■□□□ 1.13
SNX17-209ENST00000494893 GPR162Q16538 588 aa22.1■■□□□ 1.13
SNX17-209ENST00000494893 CCDC30Q5VVM6 783 aa22.1■■□□□ 1.13
SNX17-209ENST00000494893 CNBD1Q8NA66 436 aa22.1■■□□□ 1.13
SNX17-209ENST00000494893 MYH16Q9H6N6 1097 aa22.1■■□□□ 1.13
SNX17-209ENST00000494893 UTRNP46939 3433 aa22.09■■□□□ 1.13
SNX17-209ENST00000494893 FAM177BA6PVY3 158 aa22.09■■□□□ 1.13
SNX17-209ENST00000494893 NBPF5PQ86XG9 351 aaPredicted RBP22.09■■□□□ 1.13
SNX17-209ENST00000494893 CDCA7LQ96GN5 454 aa22.09■■□□□ 1.13
SNX17-209ENST00000494893 BRCA1P38398 1863 aaKnown RBP22.09■■□□□ 1.13
SNX17-209ENST00000494893 SLFN5Q08AF3 891 aa22.08■■□□□ 1.13
SNX17-209ENST00000494893 SUSD4Q5VX71 490 aa22.08■■□□□ 1.13
SNX17-209ENST00000494893 PLBD2Q8NHP8 589 aa22.08■■□□□ 1.13
SNX17-209ENST00000494893 BRIP1Q9BX63 1249 aa22.08■■□□□ 1.13
SNX17-209ENST00000494893 ANKRD13DQ6ZTN6 518 aa22.07■■□□□ 1.12
SNX17-209ENST00000494893 ABCC12Q96J65 1359 aa22.07■■□□□ 1.12
SNX17-209ENST00000494893 COL11A2P13942 1736 aaPredicted RBP22.06■■□□□ 1.12
SNX17-209ENST00000494893 NTSR2O95665 410 aa22.06■■□□□ 1.12
SNX17-209ENST00000494893 TCIRG1Q13488 830 aa22.06■■□□□ 1.12
SNX17-209ENST00000494893 G2E3Q7L622 706 aa22.06■■□□□ 1.12
SNX17-209ENST00000494893 ANKRD36CQ5JPF3 1778 aa22.05■■□□□ 1.12
SNX17-209ENST00000494893 IBTKQ9P2D0 1353 aaPredicted RBP22.05■■□□□ 1.12
SNX17-209ENST00000494893 DCAF8L1A6NGE4 600 aa22.05■■□□□ 1.12
SNX17-209ENST00000494893 E9PSI1 815 aa22.05■■□□□ 1.12
SNX17-209ENST00000494893 TPTE2Q6XPS3 522 aa22.05■■□□□ 1.12
SNX17-209ENST00000494893 NUTM1Q86Y26 1132 aa22.05■■□□□ 1.12
SNX17-209ENST00000494893 C2CD5Q86YS7 1000 aa22.05■■□□□ 1.12
SNX17-209ENST00000494893 TRMT2AQ8IZ69 625 aaKnown RBP22.05■■□□□ 1.12
SNX17-209ENST00000494893 DLEC1Q9Y238 1755 aa22.04■■□□□ 1.12
SNX17-209ENST00000494893 ST5P78524 1137 aa22.04■■□□□ 1.12
SNX17-209ENST00000494893 NLRP10Q86W26 655 aa22.04■■□□□ 1.12
SNX17-209ENST00000494893 TNRC6CQ9HCJ0 1690 aaKnown RBP22.04■■□□□ 1.12
SNX17-209ENST00000494893 ARFGEF2Q9Y6D5 1785 aa22.03■■□□□ 1.12
SNX17-209ENST00000494893 ERFEQ4G0M1 354 aa22.03■■□□□ 1.12
SNX17-209ENST00000494893 YTHDC1Q96MU7 727 aaKnown RBP22.03■■□□□ 1.12
SNX17-209ENST00000494893 ISCA1Q9BUE6 129 aa22.03■■□□□ 1.12
SNX17-209ENST00000494893 CHMP4AQ9BY43 222 aa22.03■■□□□ 1.12
SNX17-209ENST00000494893 PIM2Q9P1W9 311 aa22.03■■□□□ 1.12
SNX17-209ENST00000494893 BCS1LQ9Y276 419 aa22.03■■□□□ 1.12
SNX17-209ENST00000494893 KLRG2A4D1S0 409 aaPredicted RBP22.02■■□□□ 1.12
SNX17-209ENST00000494893 SLC4A2P04920 1241 aa22.02■■□□□ 1.12
SNX17-209ENST00000494893 PDE6BP35913 854 aa22.02■■□□□ 1.12
SNX17-209ENST00000494893 PARP10Q53GL7 1025 aa22.02■■□□□ 1.12
SNX17-209ENST00000494893 HSP90AB3PQ58FF7 597 aa22.02■■□□□ 1.12
SNX17-209ENST00000494893 STK31Q9BXU1 1019 aa22.02■■□□□ 1.12
SNX17-209ENST00000494893 ADCY9O60503 1353 aa22.01■■□□□ 1.11
SNX17-209ENST00000494893 H0YIN7 160 aa22.01■■□□□ 1.11
SNX17-209ENST00000494893 NPHP1O15259 732 aa22.01■■□□□ 1.11
SNX17-209ENST00000494893 ZNF428Q96B54 188 aa22.01■■□□□ 1.11
SNX17-209ENST00000494893 NYXQ9GZU5 481 aa22.01■■□□□ 1.11
SNX17-209ENST00000494893 ATP5J2-PTCD1G3V325 749 aa22■■□□□ 1.11
SNX17-209ENST00000494893 GRIN3BO60391 1043 aa22■■□□□ 1.11
SNX17-209ENST00000494893 SRGNP10124 158 aa22■■□□□ 1.11
SNX17-209ENST00000494893 SYNE4Q8N205 404 aa22■■□□□ 1.11
SNX17-209ENST00000494893 RIC1Q4ADV7 1423 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms