RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 ADGRB1O14514 1584 aa10.58□□□□□ -0.72
RPGR-210ENST00000494841 PIK3R4Q99570 1358 aa10.58□□□□□ -0.72
RPGR-210ENST00000494841 SOX11P35716 441 aa10.58□□□□□ -0.72
RPGR-210ENST00000494841 DZIP3Q86Y13 1208 aaKnown RBP10.58□□□□□ -0.72
RPGR-210ENST00000494841 MPNDQ8N594 471 aa10.58□□□□□ -0.72
RPGR-210ENST00000494841 CDK15Q96Q40 435 aa10.58□□□□□ -0.72
RPGR-210ENST00000494841 CARD11Q9BXL7 1154 aa10.58□□□□□ -0.72
RPGR-210ENST00000494841 LRPPRCP42704 1394 aaKnown RBP10.57□□□□□ -0.72
RPGR-210ENST00000494841 SAFB2Q14151 953 aaKnown RBP eCLIP10.57□□□□□ -0.72
RPGR-210ENST00000494841 ALG2Q9H553 416 aa10.57□□□□□ -0.72
RPGR-210ENST00000494841 TOR4AQ9NXH8 423 aa10.57□□□□□ -0.72
RPGR-210ENST00000494841 ROBO2Q9HCK4 1378 aa10.56□□□□□ -0.72
RPGR-210ENST00000494841 SNIP1Q8TAD8 396 aaKnown RBP10.56□□□□□ -0.72
RPGR-210ENST00000494841 PRAM1Q96QH2 718 aa10.56□□□□□ -0.72
RPGR-210ENST00000494841 XRN1Q8IZH2 1706 aaKnown RBP10.55□□□□□ -0.72
RPGR-210ENST00000494841 RALGAPBQ86X10 1494 aa10.55□□□□□ -0.72
RPGR-210ENST00000494841 LTBP4Q8N2S1 1624 aa10.55□□□□□ -0.72
RPGR-210ENST00000494841 ABCC11Q96J66 1382 aa10.55□□□□□ -0.72
RPGR-210ENST00000494841 PLEKHH1Q9ULM0 1364 aa10.55□□□□□ -0.72
RPGR-210ENST00000494841 MCCD1P59942 119 aaPredicted RBP10.55□□□□□ -0.72
RPGR-210ENST00000494841 ARID5BQ14865 1188 aa10.55□□□□□ -0.72
RPGR-210ENST00000494841 ZNF592Q92610 1267 aa10.55□□□□□ -0.72
RPGR-210ENST00000494841 GLMNQ92990 594 aa10.55□□□□□ -0.72
RPGR-210ENST00000494841 CDV3Q9UKY7 258 aaKnown RBP10.55□□□□□ -0.72
RPGR-210ENST00000494841 PDZRN3Q9UPQ7 1066 aa10.55□□□□□ -0.72
RPGR-210ENST00000494841 ADH1CP00326 375 aa10.54□□□□□ -0.72
RPGR-210ENST00000494841 ZEB1P37275 1124 aaPredicted RBP10.54□□□□□ -0.72
RPGR-210ENST00000494841 SEMA3FQ13275 785 aa10.54□□□□□ -0.72
RPGR-210ENST00000494841 NWD1Q149M9 1564 aa10.54□□□□□ -0.72
RPGR-210ENST00000494841 NBPF20Q3BBV1 942 aa10.54□□□□□ -0.72
RPGR-210ENST00000494841 VASH1Q7L8A9 365 aaPredicted RBP10.54□□□□□ -0.72
RPGR-210ENST00000494841 CYP4X1Q8N118 509 aa10.54□□□□□ -0.72
RPGR-210ENST00000494841 POGKQ9P215 609 aa10.54□□□□□ -0.72
RPGR-210ENST00000494841 XIRP1Q702N8 1843 aaKnown RBP10.54□□□□□ -0.72
RPGR-210ENST00000494841 LRRC7Q96NW7 1537 aa10.53□□□□□ -0.72
RPGR-210ENST00000494841 TMEM94Q12767 1356 aa10.53□□□□□ -0.72
RPGR-210ENST00000494841 GPRASP1Q5JY77 1395 aa10.53□□□□□ -0.72
RPGR-210ENST00000494841 ALDH1A1P00352 501 aa10.53□□□□□ -0.72
RPGR-210ENST00000494841 GRM5P41594 1212 aa10.53□□□□□ -0.72
RPGR-210ENST00000494841 HDGFL1Q5TGJ6 251 aa10.53□□□□□ -0.72
RPGR-210ENST00000494841 KCTD15Q96SI1 283 aaPredicted RBP10.53□□□□□ -0.72
RPGR-210ENST00000494841 HIRIP3Q9BW71 556 aaPredicted RBP10.53□□□□□ -0.72
RPGR-210ENST00000494841 TTC24A2A3L6 582 aaPredicted RBP10.52□□□□□ -0.73
RPGR-210ENST00000494841 ESPNB1AK53 854 aa10.52□□□□□ -0.73
RPGR-210ENST00000494841 J3QL48 77 aa10.52□□□□□ -0.73
RPGR-210ENST00000494841 FSHRP23945 695 aa10.52□□□□□ -0.73
RPGR-210ENST00000494841 SIRT1Q96EB6 747 aa10.52□□□□□ -0.73
RPGR-210ENST00000494841 CEP126Q9P2H0 1117 aa10.52□□□□□ -0.73
RPGR-210ENST00000494841 KNDC1Q76NI1 1749 aa10.52□□□□□ -0.73
RPGR-210ENST00000494841 ARHGEF28Q8N1W1 1705 aaKnown RBP10.52□□□□□ -0.73
RPGR-210ENST00000494841 TECPR2O15040 1411 aa10.51□□□□□ -0.73
RPGR-210ENST00000494841 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.51□□□□□ -0.73
RPGR-210ENST00000494841 ST20-MTHFSA0A0A6YYL1 179 aa10.51□□□□□ -0.73
RPGR-210ENST00000494841 GIGYF1O75420 1035 aaPredicted RBP10.51□□□□□ -0.73
RPGR-210ENST00000494841 SMPD1P17405 629 aa10.51□□□□□ -0.73
RPGR-210ENST00000494841 C1orf115Q9H7X2 142 aa10.51□□□□□ -0.73
RPGR-210ENST00000494841 CPS1P31327 1500 aa10.51□□□□□ -0.73
RPGR-210ENST00000494841 NKTRP30414 1462 aaKnown RBP10.5□□□□□ -0.73
RPGR-210ENST00000494841 INTS6LQ5JSJ4 861 aaKnown RBP10.5□□□□□ -0.73
RPGR-210ENST00000494841 PTCH1Q13635 1447 aa10.5□□□□□ -0.73
RPGR-210ENST00000494841 FAM135BQ49AJ0 1406 aa10.5□□□□□ -0.73
RPGR-210ENST00000494841 DLC1Q96QB1 1528 aa10.49□□□□□ -0.73
RPGR-210ENST00000494841 NR3C2P08235 984 aa10.49□□□□□ -0.73
RPGR-210ENST00000494841 HSPA5P11021 654 aaKnown RBP10.49□□□□□ -0.73
RPGR-210ENST00000494841 CALR3Q96L12 384 aaKnown RBP10.49□□□□□ -0.73
RPGR-210ENST00000494841 UCN2Q96RP3 112 aa10.49□□□□□ -0.73
RPGR-210ENST00000494841 CENPJQ9HC77 1338 aaPredicted RBP10.49□□□□□ -0.73
RPGR-210ENST00000494841 USP47Q96K76 1375 aa10.49□□□□□ -0.73
RPGR-210ENST00000494841 NR5A1Q13285 461 aa10.48□□□□□ -0.73
RPGR-210ENST00000494841 PHTF2Q8N3S3 785 aa10.48□□□□□ -0.73
RPGR-210ENST00000494841 C19orf44Q9H6X5 657 aa10.48□□□□□ -0.73
RPGR-210ENST00000494841 WASF2Q9Y6W5 498 aa10.48□□□□□ -0.73
RPGR-210ENST00000494841 QRICH2Q9H0J4 1663 aa10.47□□□□□ -0.73
RPGR-210ENST00000494841 NALCNQ8IZF0 1738 aa10.47□□□□□ -0.73
RPGR-210ENST00000494841 PIK3CDO00329 1044 aa10.47□□□□□ -0.73
RPGR-210ENST00000494841 NNTQ13423 1086 aa10.47□□□□□ -0.73
RPGR-210ENST00000494841 SEPT12Q8IYM1 358 aa10.47□□□□□ -0.73
RPGR-210ENST00000494841 NRG2O14511 850 aaPredicted RBP10.46□□□□□ -0.73
RPGR-210ENST00000494841 GFRA3O60609 400 aa10.46□□□□□ -0.73
RPGR-210ENST00000494841 ATF3P18847 181 aa10.46□□□□□ -0.73
RPGR-210ENST00000494841 RAB15P59190 212 aa10.46□□□□□ -0.73
RPGR-210ENST00000494841 TESK2Q96S53 571 aa10.46□□□□□ -0.73
RPGR-210ENST00000494841 CDK19Q9BWU1 502 aa10.46□□□□□ -0.73
RPGR-210ENST00000494841 MSH6P52701 1360 aa10.46□□□□□ -0.74
RPGR-210ENST00000494841 EIF3AQ14152 1382 aaKnown RBP10.46□□□□□ -0.74
RPGR-210ENST00000494841 ADGRL3Q9HAR2 1447 aa10.45□□□□□ -0.74
RPGR-210ENST00000494841 NCOA3Q9Y6Q9 1424 aa10.45□□□□□ -0.74
RPGR-210ENST00000494841 WASLO00401 505 aaPredicted RBP10.45□□□□□ -0.74
RPGR-210ENST00000494841 SLFNL1Q499Z3 407 aa10.45□□□□□ -0.74
RPGR-210ENST00000494841 RNF135Q8IUD6 432 aa10.45□□□□□ -0.74
RPGR-210ENST00000494841 CCDC85AQ96PX6 553 aaPredicted RBP10.45□□□□□ -0.74
RPGR-210ENST00000494841 RGPD8O14715 1765 aaPredicted RBP10.44□□□□□ -0.74
RPGR-210ENST00000494841 UBAP1LF5GYI3 381 aa10.44□□□□□ -0.74
RPGR-210ENST00000494841 RNF20Q5VTR2 975 aa10.44□□□□□ -0.74
RPGR-210ENST00000494841 CCDC116Q8IYX3 515 aa10.44□□□□□ -0.74
RPGR-210ENST00000494841 HPS1Q92902 700 aa10.44□□□□□ -0.74
RPGR-210ENST00000494841 SLAIN2Q9P270 581 aa10.44□□□□□ -0.74
RPGR-210ENST00000494841 FAM187AA6NFU0 413 aa10.43□□□□□ -0.74
RPGR-210ENST00000494841 ERVH48-1M5A8F1 160 aa10.43□□□□□ -0.74
RPGR-210ENST00000494841 PIP4K2BP78356 416 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms