RNA–Protein interactions for RNA: ENST00000494829.1

RUNX1-217, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 3,622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-217ENST00000494829 DDX21Q9NR30 783 aaKnown RBP eCLIP7.1□□□□□ -1.27
RUNX1-217ENST00000494829 SSUH2Q9Y2M2 353 aa7.1□□□□□ -1.27
RUNX1-217ENST00000494829 NUP188Q5SRE5 1749 aa7.1□□□□□ -1.27
RUNX1-217ENST00000494829 LAMB4A4D0S4 1761 aa7.1□□□□□ -1.27
RUNX1-217ENST00000494829 SURF6O75683 361 aaKnown RBP7.09□□□□□ -1.27
RUNX1-217ENST00000494829 RHPN1Q8TCX5 695 aa7.09□□□□□ -1.27
RUNX1-217ENST00000494829 CHAMP1Q96JM3 812 aa7.09□□□□□ -1.27
RUNX1-217ENST00000494829 DTNBO60941 627 aa7.09□□□□□ -1.27
RUNX1-217ENST00000494829 TOM1L2Q6ZVM7 507 aa7.09□□□□□ -1.27
RUNX1-217ENST00000494829 ATP5J2-PTCD1G3V325 749 aa7.09□□□□□ -1.27
RUNX1-217ENST00000494829 PTCD1O75127 700 aaKnown RBP7.09□□□□□ -1.27
RUNX1-217ENST00000494829 SASH1O94885 1247 aa7.09□□□□□ -1.27
RUNX1-217ENST00000494829 PKP1Q13835 747 aa7.09□□□□□ -1.27
RUNX1-217ENST00000494829 TTLL7Q6ZT98 887 aa7.09□□□□□ -1.27
RUNX1-217ENST00000494829 VSIG10Q8N0Z9 540 aa7.09□□□□□ -1.27
RUNX1-217ENST00000494829 ROBO1Q9Y6N7 1651 aa7.09□□□□□ -1.27
RUNX1-217ENST00000494829 A1BGP04217 495 aa7.08□□□□□ -1.28
RUNX1-217ENST00000494829 DDX54Q8TDD1 881 aaKnown RBP7.08□□□□□ -1.28
RUNX1-217ENST00000494829 DCAF5Q96JK2 942 aa7.08□□□□□ -1.28
RUNX1-217ENST00000494829 DAXXQ9UER7 740 aaPredicted RBP7.08□□□□□ -1.28
RUNX1-217ENST00000494829 STAP2Q9UGK3 403 aa7.08□□□□□ -1.28
RUNX1-217ENST00000494829 SPG7Q9UQ90 795 aa7.08□□□□□ -1.28
RUNX1-217ENST00000494829 NEURL1BA8MQ27 555 aa7.08□□□□□ -1.28
RUNX1-217ENST00000494829 MYD88Q99836 296 aa7.08□□□□□ -1.28
RUNX1-217ENST00000494829 UTYO14607 1347 aa7.08□□□□□ -1.28
RUNX1-217ENST00000494829 ITGB4P16144 1822 aa7.08□□□□□ -1.28
RUNX1-217ENST00000494829 HMMRO75330 724 aa7.08□□□□□ -1.28
RUNX1-217ENST00000494829 CHMLP26374 656 aa7.08□□□□□ -1.28
RUNX1-217ENST00000494829 SNX21Q969T3 373 aa7.08□□□□□ -1.28
RUNX1-217ENST00000494829 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.08□□□□□ -1.28
RUNX1-217ENST00000494829 RILPL2Q969X0 211 aa7.07□□□□□ -1.28
RUNX1-217ENST00000494829 NDUFB9Q9Y6M9 179 aa7.07□□□□□ -1.28
RUNX1-217ENST00000494829 GRM8O00222 908 aa7.07□□□□□ -1.28
RUNX1-217ENST00000494829 CASP7P55210 303 aa7.07□□□□□ -1.28
RUNX1-217ENST00000494829 MTX1Q13505 466 aa7.07□□□□□ -1.28
RUNX1-217ENST00000494829 BECN1Q14457 450 aa7.07□□□□□ -1.28
RUNX1-217ENST00000494829 RTL5Q5HYW3 569 aaPredicted RBP7.07□□□□□ -1.28
RUNX1-217ENST00000494829 ZCRB1Q8TBF4 217 aaKnown RBP7.07□□□□□ -1.28
RUNX1-217ENST00000494829 SLC4A9Q96Q91 983 aa7.07□□□□□ -1.28
RUNX1-217ENST00000494829 ESYT1Q9BSJ8 1104 aa7.07□□□□□ -1.28
RUNX1-217ENST00000494829 SIL1Q9H173 461 aa7.07□□□□□ -1.28
RUNX1-217ENST00000494829 CABP4P57796 275 aa7.07□□□□□ -1.28
RUNX1-217ENST00000494829 ZGPATQ8N5A5 531 aaKnown RBP7.07□□□□□ -1.28
RUNX1-217ENST00000494829 HYPKQ9NX55 129 aa7.07□□□□□ -1.28
RUNX1-217ENST00000494829 RFX5P48382 616 aaPredicted RBP7.06□□□□□ -1.28
RUNX1-217ENST00000494829 GCKRQ14397 625 aa7.06□□□□□ -1.28
RUNX1-217ENST00000494829 LINS1Q8NG48 757 aa7.06□□□□□ -1.28
RUNX1-217ENST00000494829 EAF2Q96CJ1 260 aaPredicted RBP7.06□□□□□ -1.28
RUNX1-217ENST00000494829 EDC3Q96F86 508 aaKnown RBP7.06□□□□□ -1.28
RUNX1-217ENST00000494829 BTG4Q9NY30 223 aa7.06□□□□□ -1.28
RUNX1-217ENST00000494829 ASAP1Q9ULH1 1129 aa7.06□□□□□ -1.28
RUNX1-217ENST00000494829 C9orf78Q9NZ63 289 aaPredicted RBP7.06□□□□□ -1.28
RUNX1-217ENST00000494829 TNS2Q63HR2 1409 aa7.06□□□□□ -1.28
RUNX1-217ENST00000494829 TRIM6-TRIM34B2RNG4 842 aa7.06□□□□□ -1.28
RUNX1-217ENST00000494829 SNRPA1P09661 255 aaKnown RBP7.06□□□□□ -1.28
RUNX1-217ENST00000494829 RIC3Q7Z5B4 369 aa7.06□□□□□ -1.28
RUNX1-217ENST00000494829 METTL22Q9BUU2 404 aaPredicted RBP7.06□□□□□ -1.28
RUNX1-217ENST00000494829 CARD10Q9BWT7 1032 aa7.06□□□□□ -1.28
RUNX1-217ENST00000494829 NKX1-1Q15270 411 aaPredicted RBP7.05□□□□□ -1.28
RUNX1-217ENST00000494829 SLFNL1Q499Z3 407 aa7.05□□□□□ -1.28
RUNX1-217ENST00000494829 SYNE4Q8N205 404 aa7.05□□□□□ -1.28
RUNX1-217ENST00000494829 CCDC8Q9H0W5 538 aaPredicted RBP7.05□□□□□ -1.28
RUNX1-217ENST00000494829 TAF6LQ9Y6J9 622 aa7.05□□□□□ -1.28
RUNX1-217ENST00000494829 DISP2A7MBM2 1401 aa7.05□□□□□ -1.28
RUNX1-217ENST00000494829 SLIT2O94813 1529 aa7.05□□□□□ -1.28
RUNX1-217ENST00000494829 ALDH1L1O75891 902 aa7.05□□□□□ -1.28
RUNX1-217ENST00000494829 IL2RBP14784 551 aa7.05□□□□□ -1.28
RUNX1-217ENST00000494829 ANKRD13DQ6ZTN6 518 aa7.05□□□□□ -1.28
RUNX1-217ENST00000494829 HSCBQ8IWL3 235 aa7.05□□□□□ -1.28
RUNX1-217ENST00000494829 PIGBQ92521 554 aa7.05□□□□□ -1.28
RUNX1-217ENST00000494829 FMNL2Q96PY5 1086 aa7.05□□□□□ -1.28
RUNX1-217ENST00000494829 LTBP4Q8N2S1 1624 aa7.05□□□□□ -1.28
RUNX1-217ENST00000494829 K7ELQ4 463 aaPredicted RBP7.05□□□□□ -1.28
RUNX1-217ENST00000494829 ERC2O15083 957 aa7.05□□□□□ -1.28
RUNX1-217ENST00000494829 SSFA2P28290 1259 aa7.05□□□□□ -1.28
RUNX1-217ENST00000494829 UBE3BQ7Z3V4 1068 aa7.05□□□□□ -1.28
RUNX1-217ENST00000494829 RASEFQ8IZ41 740 aa7.05□□□□□ -1.28
RUNX1-217ENST00000494829 BBXQ8WY36 941 aaPredicted RBP7.05□□□□□ -1.28
RUNX1-217ENST00000494829 TNPO1Q92973 898 aaKnown RBP7.05□□□□□ -1.28
RUNX1-217ENST00000494829 LARP6Q9BRS8 491 aaKnown RBP7.05□□□□□ -1.28
RUNX1-217ENST00000494829 PCDH11XQ9BZA7 1347 aa7.04□□□□□ -1.28
RUNX1-217ENST00000494829 PCDH11YQ9BZA8 1340 aa7.04□□□□□ -1.28
RUNX1-217ENST00000494829 CPA1P15085 419 aa7.04□□□□□ -1.28
RUNX1-217ENST00000494829 COL15A1P39059 1388 aa7.04□□□□□ -1.28
RUNX1-217ENST00000494829 WNK3Q9BYP7 1800 aa7.04□□□□□ -1.28
RUNX1-217ENST00000494829 FOXO4P98177 505 aa7.04□□□□□ -1.28
RUNX1-217ENST00000494829 PTH1RQ03431 593 aa7.04□□□□□ -1.28
RUNX1-217ENST00000494829 PTPN12Q05209 780 aaKnown RBP7.04□□□□□ -1.28
RUNX1-217ENST00000494829 TTC5Q8N0Z6 440 aa7.04□□□□□ -1.28
RUNX1-217ENST00000494829 KIF1BPQ96EK5 621 aa7.04□□□□□ -1.28
RUNX1-217ENST00000494829 ZBTB3Q9H5J0 574 aa7.04□□□□□ -1.28
RUNX1-217ENST00000494829 ZDHHC9Q9Y397 364 aa7.04□□□□□ -1.28
RUNX1-217ENST00000494829 USP42Q9H9J4 1324 aaKnown RBP7.04□□□□□ -1.28
RUNX1-217ENST00000494829 MCM4P33991 863 aa7.03□□□□□ -1.28
RUNX1-217ENST00000494829 MYT1Q01538 1121 aa7.03□□□□□ -1.28
RUNX1-217ENST00000494829 GSE1Q14687 1217 aa7.03□□□□□ -1.28
RUNX1-217ENST00000494829 NOL8Q76FK4 1167 aaKnown RBP7.03□□□□□ -1.28
RUNX1-217ENST00000494829 UPF3BQ9BZI7 483 aaKnown RBP7.03□□□□□ -1.28
RUNX1-217ENST00000494829 LSG1Q9H089 658 aaKnown RBP7.03□□□□□ -1.28
RUNX1-217ENST00000494829 ATG3Q9NT62 314 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms